RNA–Protein interactions for RNA: ENSMUST00000102843.9

Rtn4-205, Transcript of Reticulon-4, mousemouse

TSL 1 (best) BASIC

Gene Rtn4, Length 4,618 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4-205ENSMUST00000102843 Rhox8Q6VSS7 320 aa24.78■■□□□ 1.56
Rtn4-205ENSMUST00000102843 Rpgrip1Q9EPQ2 1331 aa22.62■■□□□ 1.21
Rtn4-205ENSMUST00000102843 NischQ80TM9 1593 aa22.39■■□□□ 1.17
Rtn4-205ENSMUST00000102843 Ehmt2Q9Z148 1263 aaKnown RBP22.27■■□□□ 1.16
Rtn4-205ENSMUST00000102843 Ccdc136Q3TVA9 1136 aa22.19■■□□□ 1.14
Rtn4-205ENSMUST00000102843 Cngb1E1AZ71 1325 aa21.77■■□□□ 1.07
Rtn4-205ENSMUST00000102843 Esf1Q3V1V3 845 aaKnown RBP21.74■■□□□ 1.07
Rtn4-205ENSMUST00000102843 Trim41Q5NCC3 630 aa21.72■■□□□ 1.07
Rtn4-205ENSMUST00000102843 Gab3Q8BSM5 595 aa21.58■■□□□ 1.05
Rtn4-205ENSMUST00000102843 Las1lA2BE28 776 aaKnown RBP21.4■■□□□ 1.02
Rtn4-205ENSMUST00000102843 Wdr66E9Q743 1299 aa21.37■■□□□ 1.01
Rtn4-205ENSMUST00000102843 Zeb1Q64318 1117 aa21.34■■□□□ 1.01
Rtn4-205ENSMUST00000102843 Acin1Q9JIX8 1338 aaKnown RBP21.24■□□□□ 0.99
Rtn4-205ENSMUST00000102843 Npm2Q80W85 207 aa21.21■□□□□ 0.99
Rtn4-205ENSMUST00000102843 Myt1lP97500 1187 aa21.13■□□□□ 0.97
Rtn4-205ENSMUST00000102843 HrcG5E8J6 738 aa21.08■□□□□ 0.97
Rtn4-205ENSMUST00000102843 Ccdc180J3QNE4 1664 aa21.08■□□□□ 0.96
Rtn4-205ENSMUST00000102843 Ube2uB1AUC4 352 aa21.03■□□□□ 0.96
Rtn4-205ENSMUST00000102843 Abcc9P70170 1546 aa20.98■□□□□ 0.95
Rtn4-205ENSMUST00000102843 NefmP08553 848 aa20.9■□□□□ 0.94
Rtn4-205ENSMUST00000102843 Rtl1Q7M732 1744 aa20.82■□□□□ 0.92
Rtn4-205ENSMUST00000102843 UbtfP25976 765 aaKnown RBP20.82■□□□□ 0.92
Rtn4-205ENSMUST00000102843 Zcchc6Q5BLK4 1491 aaKnown RBP20.62■□□□□ 0.89
Rtn4-205ENSMUST00000102843 Pelp1Q9DBD5 1123 aaKnown RBP20.55■□□□□ 0.88
Rtn4-205ENSMUST00000102843 Abcc8B2RUS7 1588 aa20.52■□□□□ 0.88
Rtn4-205ENSMUST00000102843 Pcgf6Q99NA9 353 aa20.5■□□□□ 0.87
Rtn4-205ENSMUST00000102843 Il27Q8K3I6 234 aa20.44■□□□□ 0.86
Rtn4-205ENSMUST00000102843 CenpbP27790 599 aa20.37■□□□□ 0.85
Rtn4-205ENSMUST00000102843 Stra8P70278 393 aa20.31■□□□□ 0.84
Rtn4-205ENSMUST00000102843 Gm35339A0A140LHH9 1649 aa20.28■□□□□ 0.84
Rtn4-205ENSMUST00000102843 Cdk11bP24788 784 aaKnown RBP20.25■□□□□ 0.83
Rtn4-205ENSMUST00000102843 Slc24a1Q91WD8 1130 aa20.16■□□□□ 0.82
Rtn4-205ENSMUST00000102843 Supt5hO55201 1082 aaKnown RBP20.15■□□□□ 0.82
Rtn4-205ENSMUST00000102843 Ap3b1Q9Z1T1 1105 aa20.14■□□□□ 0.81
Rtn4-205ENSMUST00000102843 Fam50aQ9WV03 339 aaKnown RBP20.1■□□□□ 0.81
Rtn4-205ENSMUST00000102843 Nop58Q6DFW4 536 aaKnown RBP20.07■□□□□ 0.8
Rtn4-205ENSMUST00000102843 Mier1Q5UAK0 511 aa20.06■□□□□ 0.8
Rtn4-205ENSMUST00000102843 Ppargc1bQ8VHJ7 1014 aa20■□□□□ 0.79
Rtn4-205ENSMUST00000102843 NclP09405 707 aaKnown RBP19.98■□□□□ 0.79
Rtn4-205ENSMUST00000102843 TonslQ6NZL6 1363 aa19.97■□□□□ 0.79
Rtn4-205ENSMUST00000102843 Tnnt3Q9QZ47 272 aa19.86■□□□□ 0.77
Rtn4-205ENSMUST00000102843 Neurod1Q60867 357 aa19.86■□□□□ 0.77
Rtn4-205ENSMUST00000102843 NrdcQ8BHG1 1161 aa19.8■□□□□ 0.76
Rtn4-205ENSMUST00000102843 Plekhg3Q4VAC9 1341 aa19.77■□□□□ 0.76
Rtn4-205ENSMUST00000102843 Brd4Q9ESU6 1400 aaKnown RBP19.75■□□□□ 0.75
Rtn4-205ENSMUST00000102843 Dcaf1Q80TR8 1506 aa19.74■□□□□ 0.75
Rtn4-205ENSMUST00000102843 Cep164Q5DU05 1446 aa19.74■□□□□ 0.75
Rtn4-205ENSMUST00000102843 Chic1Q8CBW7 227 aa19.74■□□□□ 0.75
Rtn4-205ENSMUST00000102843 Anp32bQ9EST5 272 aaKnown RBP19.71■□□□□ 0.75
Rtn4-205ENSMUST00000102843 Npm1Q61937 292 aaKnown RBP19.68■□□□□ 0.74
Rtn4-205ENSMUST00000102843 Rb1cc1Q9ESK9 1588 aa19.66■□□□□ 0.74
Rtn4-205ENSMUST00000102843 Lmod2Q3UHZ5 550 aa19.66■□□□□ 0.74
Rtn4-205ENSMUST00000102843 ClspnQ80YR7 1315 aa19.65■□□□□ 0.74
Rtn4-205ENSMUST00000102843 Eif5bQ05D44 1216 aaKnown RBP19.61■□□□□ 0.73
Rtn4-205ENSMUST00000102843 Myt1Q8CFC2 1127 aa19.58■□□□□ 0.72
Rtn4-205ENSMUST00000102843 Amer1Q7TS75 1132 aa19.56■□□□□ 0.72
Rtn4-205ENSMUST00000102843 Clip1Q922J3 1391 aa19.5■□□□□ 0.71
Rtn4-205ENSMUST00000102843 Sall2Q9QX96 1004 aa19.48■□□□□ 0.71
Rtn4-205ENSMUST00000102843 NeflP08551 543 aa19.48■□□□□ 0.71
Rtn4-205ENSMUST00000102843 Os9Q8K2C7 672 aa19.47■□□□□ 0.71
Rtn4-205ENSMUST00000102843 Eid3Q3V124 375 aa19.46■□□□□ 0.71
Rtn4-205ENSMUST00000102843 Ttbk1Q6PCN3 1308 aa19.33■□□□□ 0.69
Rtn4-205ENSMUST00000102843 NacadQ5SWP3 1504 aa19.32■□□□□ 0.68
Rtn4-205ENSMUST00000102843 Zbtb7cQ8VCZ7 619 aa19.3■□□□□ 0.68
Rtn4-205ENSMUST00000102843 Mapk8ip2Q9ERE9 830 aa19.3■□□□□ 0.68
Rtn4-205ENSMUST00000102843 Anks4bQ8K3X6 423 aa19.26■□□□□ 0.67
Rtn4-205ENSMUST00000102843 Baz1aO88379 1555 aa19.26■□□□□ 0.67
Rtn4-205ENSMUST00000102843 4933416C03RikQ3V063 378 aa19.23■□□□□ 0.67
Rtn4-205ENSMUST00000102843 Ccer2J3QPU5 274 aa19.21■□□□□ 0.67
Rtn4-205ENSMUST00000102843 Hnrnpul2Q00PI9 745 aaKnown RBP19.21■□□□□ 0.67
Rtn4-205ENSMUST00000102843 Rtl5Q5DTT4 599 aa19.18■□□□□ 0.66
Rtn4-205ENSMUST00000102843 Anp32aO35381 247 aa19.15■□□□□ 0.66
Rtn4-205ENSMUST00000102843 Golga3P55937 1487 aa19.14■□□□□ 0.65
Rtn4-205ENSMUST00000102843 Ubl4bQ9CQ84 188 aa19.12■□□□□ 0.65
Rtn4-205ENSMUST00000102843 Csrnp3P59055 597 aa19.11■□□□□ 0.65
Rtn4-205ENSMUST00000102843 Zbtb4Q5F293 982 aa19.08■□□□□ 0.64
Rtn4-205ENSMUST00000102843 BlmO88700 1416 aa19.06■□□□□ 0.64
Rtn4-205ENSMUST00000102843 Gm38655A0A286YDK6 273 aa19.04■□□□□ 0.64
Rtn4-205ENSMUST00000102843 Setd5Q5XJV7 1441 aa19.01■□□□□ 0.63
Rtn4-205ENSMUST00000102843 Fkbp15Q6P9Q6 1216 aaKnown RBP19■□□□□ 0.63
Rtn4-205ENSMUST00000102843 Chic2Q9D9G3 165 aa18.99■□□□□ 0.63
Rtn4-205ENSMUST00000102843 Aplp2Q06335 707 aa18.99■□□□□ 0.63
Rtn4-205ENSMUST00000102843 Ifnlr1Q8CGK5 535 aa18.99■□□□□ 0.63
Rtn4-205ENSMUST00000102843 Rsf1E9PWW9 1441 aaKnown RBP18.98■□□□□ 0.63
Rtn4-205ENSMUST00000102843 Erich6D3Z6S9 713 aa18.97■□□□□ 0.63
Rtn4-205ENSMUST00000102843 Kdm5dQ62240 1548 aa18.94■□□□□ 0.62
Rtn4-205ENSMUST00000102843 Aebp2Q9Z248 504 aaKnown RBP18.93■□□□□ 0.62
Rtn4-205ENSMUST00000102843 Hdac5Q9Z2V6 1113 aa18.89■□□□□ 0.61
Rtn4-205ENSMUST00000102843 Nlrp6Q91WS2 869 aa18.87■□□□□ 0.61
Rtn4-205ENSMUST00000102843 Calr4Q3TQS0 420 aa18.86■□□□□ 0.61
Rtn4-205ENSMUST00000102843 Kif15Q6P9L6 1387 aa18.84■□□□□ 0.61
Rtn4-205ENSMUST00000102843 Mrs2Q5NCE8 434 aa18.83■□□□□ 0.6
Rtn4-205ENSMUST00000102843 Eea1Q8BL66 1411 aa18.81■□□□□ 0.6
Rtn4-205ENSMUST00000102843 Prdm10Q3UTQ7 1184 aa18.81■□□□□ 0.6
Rtn4-205ENSMUST00000102843 Gm13697A2AK42 830 aa18.8■□□□□ 0.6
Rtn4-205ENSMUST00000102843 Atp1b4Q99ME6 356 aa18.77■□□□□ 0.59
Rtn4-205ENSMUST00000102843 DaxxO35613 739 aa18.74■□□□□ 0.59
Rtn4-205ENSMUST00000102843 Ppp4r2Q0VGB7 417 aa18.74■□□□□ 0.59
Rtn4-205ENSMUST00000102843 Polr3glQ8R0C0 218 aa18.7■□□□□ 0.58
Rtn4-205ENSMUST00000102843 Clstn2Q9ER65 966 aa18.7■□□□□ 0.58
Retrieved 100 of 22,080 RNA–protein pairs in 184.7 ms