RNA–Protein interactions for RNA: ENSMUST00000102841.7

Rtn4-203, Transcript of Reticulon-4, mousemouse

TSL 1 (best) BASIC

Gene Rtn4, Length 4,060 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4-203ENSMUST00000102841 Eea1Q8BL66 1411 aa17.35■□□□□ 0.37
Rtn4-203ENSMUST00000102841 Hspa5P20029 655 aaKnown RBP17.34■□□□□ 0.37
Rtn4-203ENSMUST00000102841 Fmn1Q05860 1466 aa17.32■□□□□ 0.36
Rtn4-203ENSMUST00000102841 Ncapd3Q6ZQK0 1506 aa17.32■□□□□ 0.36
Rtn4-203ENSMUST00000102841 Gm13697A2AK42 830 aa17.29■□□□□ 0.36
Rtn4-203ENSMUST00000102841 Sin3aQ60520 1274 aaKnown RBP17.28■□□□□ 0.36
Rtn4-203ENSMUST00000102841 DaxxO35613 739 aa17.27■□□□□ 0.35
Rtn4-203ENSMUST00000102841 Ccer2J3QPU5 274 aa17.25■□□□□ 0.35
Rtn4-203ENSMUST00000102841 Baz1bQ9Z277 1479 aa17.24■□□□□ 0.35
Rtn4-203ENSMUST00000102841 Slc4a3P16283 1227 aa17.24■□□□□ 0.35
Rtn4-203ENSMUST00000102841 Ccdc27Q3V036 639 aa17.24■□□□□ 0.35
Rtn4-203ENSMUST00000102841 Rpap1Q80TE0 1409 aa17.21■□□□□ 0.34
Rtn4-203ENSMUST00000102841 Cc2d2aQ8CFW7 1633 aa17.2■□□□□ 0.34
Rtn4-203ENSMUST00000102841 NeflP08551 543 aa17.18■□□□□ 0.34
Rtn4-203ENSMUST00000102841 Chic2Q9D9G3 165 aa17.16■□□□□ 0.34
Rtn4-203ENSMUST00000102841 Hsp90aa1P07901 733 aaKnown RBP17.15■□□□□ 0.34
Rtn4-203ENSMUST00000102841 Upf2A2AT37 1269 aaKnown RBP17.14■□□□□ 0.33
Rtn4-203ENSMUST00000102841 Wwc2Q6NXJ0 1187 aa17.14■□□□□ 0.33
Rtn4-203ENSMUST00000102841 Hdac5Q9Z2V6 1113 aa17.14■□□□□ 0.33
Rtn4-203ENSMUST00000102841 Pak3Q61036 559 aa17.12■□□□□ 0.33
Rtn4-203ENSMUST00000102841 Top2aQ01320 1528 aaKnown RBP17.11■□□□□ 0.33
Rtn4-203ENSMUST00000102841 Ccdc18Q640L5 1455 aa17.11■□□□□ 0.33
Rtn4-203ENSMUST00000102841 Top2bQ64511 1612 aa17.11■□□□□ 0.33
Rtn4-203ENSMUST00000102841 Smg6P61406 1418 aaKnown RBP17.1■□□□□ 0.33
Rtn4-203ENSMUST00000102841 Ccdc9Q8VC31 543 aaKnown RBP17.06■□□□□ 0.32
Rtn4-203ENSMUST00000102841 Cttnbp2B9EJA2 1648 aa17.06■□□□□ 0.32
Rtn4-203ENSMUST00000102841 Ofd1Q80Z25 1017 aa17.05■□□□□ 0.32
Rtn4-203ENSMUST00000102841 Irx3P81067 507 aa17.04■□□□□ 0.32
Rtn4-203ENSMUST00000102841 Anp32bQ9EST5 272 aaKnown RBP17.03■□□□□ 0.32
Rtn4-203ENSMUST00000102841 Arap1Q4LDD4 1452 aa17.02■□□□□ 0.32
Rtn4-203ENSMUST00000102841 Exoc6Q8R313 802 aa17.02■□□□□ 0.31
Rtn4-203ENSMUST00000102841 Washc2Q6PGL7 1334 aa17.01■□□□□ 0.31
Rtn4-203ENSMUST00000102841 Gtf3c3Q3TMP1 882 aa16.98■□□□□ 0.31
Rtn4-203ENSMUST00000102841 Ipo9Q91YE6 1041 aa16.98■□□□□ 0.31
Rtn4-203ENSMUST00000102841 Mia2Q91ZV0 1396 aa16.97■□□□□ 0.31
Rtn4-203ENSMUST00000102841 Tcerg1Q8CGF7 1100 aaKnown RBP16.96■□□□□ 0.3
Rtn4-203ENSMUST00000102841 Zbtb4Q5F293 982 aa16.93■□□□□ 0.3
Rtn4-203ENSMUST00000102841 Arhgap35Q91YM2 1499 aa16.92■□□□□ 0.3
Rtn4-203ENSMUST00000102841 BicraF8VPZ9 1578 aa16.92■□□□□ 0.3
Rtn4-203ENSMUST00000102841 Rad21Q61550 635 aaKnown RBP16.9■□□□□ 0.3
Rtn4-203ENSMUST00000102841 CanxP35564 591 aaKnown RBP16.89■□□□□ 0.29
Rtn4-203ENSMUST00000102841 UacaQ8CGB3 1411 aa16.88■□□□□ 0.29
Rtn4-203ENSMUST00000102841 Gm13695A2AK44 830 aa16.87■□□□□ 0.29
Rtn4-203ENSMUST00000102841 ChgaP26339 463 aaKnown RBP16.87■□□□□ 0.29
Rtn4-203ENSMUST00000102841 Kif15Q6P9L6 1387 aa16.87■□□□□ 0.29
Rtn4-203ENSMUST00000102841 Arhgef5E9Q7D5 1581 aa16.86■□□□□ 0.29
Rtn4-203ENSMUST00000102841 Plcd4Q8K3R3 807 aa16.86■□□□□ 0.29
Rtn4-203ENSMUST00000102841 Slc4a2P13808 1237 aaKnown RBP16.86■□□□□ 0.29
Rtn4-203ENSMUST00000102841 Npm1Q61937 292 aaKnown RBP16.85■□□□□ 0.29
Rtn4-203ENSMUST00000102841 Naip1Q9QWK5 1403 aa16.83■□□□□ 0.29
Rtn4-203ENSMUST00000102841 Liat1Q810M6 228 aa16.83■□□□□ 0.29
Rtn4-203ENSMUST00000102841 Smarca4Q3TKT4 1613 aaKnown RBP16.83■□□□□ 0.28
Rtn4-203ENSMUST00000102841 ArxO35085 564 aa16.83■□□□□ 0.28
Rtn4-203ENSMUST00000102841 PtprkP35822 1457 aa16.81■□□□□ 0.28
Rtn4-203ENSMUST00000102841 Fyco1Q8VDC1 1437 aa16.81■□□□□ 0.28
Rtn4-203ENSMUST00000102841 Ankrd36D3Z4K0 1415 aa16.81■□□□□ 0.28
Rtn4-203ENSMUST00000102841 Rgl3Q3UYI5 709 aa16.8■□□□□ 0.28
Rtn4-203ENSMUST00000102841 Kcnh8P59111 1102 aa16.79■□□□□ 0.28
Rtn4-203ENSMUST00000102841 B4galnt3Q6L8S8 986 aa16.77■□□□□ 0.28
Rtn4-203ENSMUST00000102841 Fhad1A6PWD2 1420 aa16.77■□□□□ 0.27
Rtn4-203ENSMUST00000102841 Mphosph9A6H5Y1 991 aa16.76■□□□□ 0.27
Rtn4-203ENSMUST00000102841 CntlnA2AM05 1397 aa16.76■□□□□ 0.27
Rtn4-203ENSMUST00000102841 Dhx29Q6PGC1 1365 aaKnown RBP16.75■□□□□ 0.27
Rtn4-203ENSMUST00000102841 Zbtb7cQ8VCZ7 619 aa16.75■□□□□ 0.27
Rtn4-203ENSMUST00000102841 Tiam1Q60610 1591 aa16.74■□□□□ 0.27
Rtn4-203ENSMUST00000102841 Pkd2O35245 966 aa16.74■□□□□ 0.27
Rtn4-203ENSMUST00000102841 Dbr1Q923B1 550 aa16.73■□□□□ 0.27
Rtn4-203ENSMUST00000102841 Aebp1Q640N1 1128 aa16.71■□□□□ 0.27
Rtn4-203ENSMUST00000102841 Kdm5bQ80Y84 1544 aa16.71■□□□□ 0.26
Rtn4-203ENSMUST00000102841 AqrQ8CFQ3 1481 aaKnown RBP16.7■□□□□ 0.26
Rtn4-203ENSMUST00000102841 Arhgap27A2AB59 869 aa16.7■□□□□ 0.26
Rtn4-203ENSMUST00000102841 Egfem1Q8C088 590 aa16.7■□□□□ 0.26
Rtn4-203ENSMUST00000102841 TchhA0A0B4J1F9 1599 aa16.69■□□□□ 0.26
Rtn4-203ENSMUST00000102841 Grwd1Q810D6 446 aaKnown RBP16.69■□□□□ 0.26
Rtn4-203ENSMUST00000102841 Vps8Q0P5W1 1427 aa16.68■□□□□ 0.26
Rtn4-203ENSMUST00000102841 Cwc22Q8C5N3 908 aaKnown RBP16.67■□□□□ 0.26
Rtn4-203ENSMUST00000102841 Card11Q8CIS0 1159 aa16.67■□□□□ 0.26
Rtn4-203ENSMUST00000102841 Iqcf3Q9D498 203 aa16.66■□□□□ 0.26
Rtn4-203ENSMUST00000102841 PnisrA2AJT4 805 aaKnown RBP16.65■□□□□ 0.26
Rtn4-203ENSMUST00000102841 Shroom4Q1W617 1475 aa16.63■□□□□ 0.25
Rtn4-203ENSMUST00000102841 Pknox2Q8BG99 474 aa16.63■□□□□ 0.25
Rtn4-203ENSMUST00000102841 Usp47Q8BY87 1376 aa16.63■□□□□ 0.25
Rtn4-203ENSMUST00000102841 Rundc1Q0VDN7 615 aa16.63■□□□□ 0.25
Rtn4-203ENSMUST00000102841 Trim30dE9PWL0 497 aa16.62■□□□□ 0.25
Rtn4-203ENSMUST00000102841 Apbb1Q9QXJ1 710 aa16.62■□□□□ 0.25
Rtn4-203ENSMUST00000102841 NrkQ9R0G8 1455 aa16.62■□□□□ 0.25
Rtn4-203ENSMUST00000102841 L3mbtl2P59178 703 aa16.61■□□□□ 0.25
Rtn4-203ENSMUST00000102841 Cabp1Q9JLK7 227 aa16.61■□□□□ 0.25
Rtn4-203ENSMUST00000102841 Dnai1Q8C0M8 701 aa16.59■□□□□ 0.25
Rtn4-203ENSMUST00000102841 Ccnb3Q810T2 1396 aa16.58■□□□□ 0.25
Rtn4-203ENSMUST00000102841 Sart3Q9JLI8 962 aaKnown RBP16.58■□□□□ 0.25
Rtn4-203ENSMUST00000102841 Iqgap2Q3UQ44 1575 aa16.58■□□□□ 0.25
Rtn4-203ENSMUST00000102841 Naip5Q9R016 1403 aa16.58■□□□□ 0.24
Rtn4-203ENSMUST00000102841 Hsp90ab1P11499 724 aaKnown RBP16.57■□□□□ 0.24
Rtn4-203ENSMUST00000102841 3425401B19RikD3Z1D3 1412 aa16.56■□□□□ 0.24
Rtn4-203ENSMUST00000102841 Ppm1gQ61074 542 aa16.56■□□□□ 0.24
Rtn4-203ENSMUST00000102841 Map3k1P53349 1493 aa16.56■□□□□ 0.24
Rtn4-203ENSMUST00000102841 Fgd1P52734 960 aa16.55■□□□□ 0.24
Rtn4-203ENSMUST00000102841 Chmp5Q9D7S9 219 aa16.55■□□□□ 0.24
Rtn4-203ENSMUST00000102841 Carmil1Q6EDY6 1374 aa16.55■□□□□ 0.24
Retrieved 100 of 22,080 RNA–protein pairs in 64.7 ms