RNA–Protein interactions for RNA: ENSMUST00000102841.7

Rtn4-203, Transcript of Reticulon-4, mousemouse

TSL 1 (best) BASIC

Gene Rtn4, Length 4,060 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4-203ENSMUST00000102841 Rhox8Q6VSS7 320 aa21.9■■□□□ 1.1
Rtn4-203ENSMUST00000102841 Rpgrip1Q9EPQ2 1331 aa21.39■■□□□ 1.01
Rtn4-203ENSMUST00000102841 NischQ80TM9 1593 aa21.26■□□□□ 0.99
Rtn4-203ENSMUST00000102841 Ehmt2Q9Z148 1263 aaKnown RBP20.94■□□□□ 0.94
Rtn4-203ENSMUST00000102841 Acin1Q9JIX8 1338 aaKnown RBP20.64■□□□□ 0.89
Rtn4-203ENSMUST00000102841 Ccdc180J3QNE4 1664 aa20.47■□□□□ 0.87
Rtn4-203ENSMUST00000102841 Rtl1Q7M732 1744 aa20.4■□□□□ 0.86
Rtn4-203ENSMUST00000102841 Abcc9P70170 1546 aa20.38■□□□□ 0.85
Rtn4-203ENSMUST00000102841 Pcgf6Q99NA9 353 aa20.32■□□□□ 0.84
Rtn4-203ENSMUST00000102841 Ccdc136Q3TVA9 1136 aa20.03■□□□□ 0.8
Rtn4-203ENSMUST00000102841 Supt5hO55201 1082 aaKnown RBP19.85■□□□□ 0.77
Rtn4-203ENSMUST00000102841 HrcG5E8J6 738 aa19.83■□□□□ 0.76
Rtn4-203ENSMUST00000102841 Zeb1Q64318 1117 aa19.82■□□□□ 0.76
Rtn4-203ENSMUST00000102841 Las1lA2BE28 776 aaKnown RBP19.8■□□□□ 0.76
Rtn4-203ENSMUST00000102841 Abcc8B2RUS7 1588 aa19.77■□□□□ 0.75
Rtn4-203ENSMUST00000102841 Trim41Q5NCC3 630 aa19.76■□□□□ 0.75
Rtn4-203ENSMUST00000102841 Gm35339A0A140LHH9 1649 aa19.69■□□□□ 0.74
Rtn4-203ENSMUST00000102841 Dcaf1Q80TR8 1506 aa19.57■□□□□ 0.72
Rtn4-203ENSMUST00000102841 Neurod1Q60867 357 aa19.55■□□□□ 0.72
Rtn4-203ENSMUST00000102841 Cngb1E1AZ71 1325 aa19.46■□□□□ 0.71
Rtn4-203ENSMUST00000102841 Gab3Q8BSM5 595 aa19.41■□□□□ 0.7
Rtn4-203ENSMUST00000102841 Zcchc6Q5BLK4 1491 aaKnown RBP19.41■□□□□ 0.7
Rtn4-203ENSMUST00000102841 Wdr66E9Q743 1299 aa19.37■□□□□ 0.69
Rtn4-203ENSMUST00000102841 NefmP08553 848 aa19.3■□□□□ 0.68
Rtn4-203ENSMUST00000102841 Sall2Q9QX96 1004 aa19.09■□□□□ 0.65
Rtn4-203ENSMUST00000102841 CenpbP27790 599 aa19.05■□□□□ 0.64
Rtn4-203ENSMUST00000102841 Mier1Q5UAK0 511 aa19.05■□□□□ 0.64
Rtn4-203ENSMUST00000102841 Csrnp3P59055 597 aa19.04■□□□□ 0.64
Rtn4-203ENSMUST00000102841 Cdk11bP24788 784 aaKnown RBP18.98■□□□□ 0.63
Rtn4-203ENSMUST00000102841 1700123L14RikQ3V2K7 440 aa18.97■□□□□ 0.63
Rtn4-203ENSMUST00000102841 Ppargc1bQ8VHJ7 1014 aa18.97■□□□□ 0.63
Rtn4-203ENSMUST00000102841 Anks4bQ8K3X6 423 aa18.94■□□□□ 0.62
Rtn4-203ENSMUST00000102841 UbtfP25976 765 aaKnown RBP18.92■□□□□ 0.62
Rtn4-203ENSMUST00000102841 Nop58Q6DFW4 536 aaKnown RBP18.9■□□□□ 0.62
Rtn4-203ENSMUST00000102841 Cep164Q5DU05 1446 aa18.86■□□□□ 0.61
Rtn4-203ENSMUST00000102841 Myt1Q8CFC2 1127 aa18.84■□□□□ 0.61
Rtn4-203ENSMUST00000102841 Gm38655A0A286YDK6 273 aa18.78■□□□□ 0.6
Rtn4-203ENSMUST00000102841 Esf1Q3V1V3 845 aaKnown RBP18.71■□□□□ 0.59
Rtn4-203ENSMUST00000102841 Chic1Q8CBW7 227 aa18.7■□□□□ 0.58
Rtn4-203ENSMUST00000102841 Rb1cc1Q9ESK9 1588 aa18.7■□□□□ 0.58
Rtn4-203ENSMUST00000102841 Aplp2Q06335 707 aa18.65■□□□□ 0.58
Rtn4-203ENSMUST00000102841 Myt1lP97500 1187 aa18.63■□□□□ 0.57
Rtn4-203ENSMUST00000102841 ClspnQ80YR7 1315 aa18.61■□□□□ 0.57
Rtn4-203ENSMUST00000102841 Aebp2Q9Z248 504 aaKnown RBP18.59■□□□□ 0.57
Rtn4-203ENSMUST00000102841 TonslQ6NZL6 1363 aa18.48■□□□□ 0.55
Rtn4-203ENSMUST00000102841 DiexfQ8BTT6 772 aaKnown RBP18.47■□□□□ 0.55
Rtn4-203ENSMUST00000102841 Npm2Q80W85 207 aa18.38■□□□□ 0.53
Rtn4-203ENSMUST00000102841 Baz1aO88379 1555 aa18.38■□□□□ 0.53
Rtn4-203ENSMUST00000102841 Rsf1E9PWW9 1441 aaKnown RBP18.37■□□□□ 0.53
Rtn4-203ENSMUST00000102841 Tnnt3Q9QZ47 272 aa18.3■□□□□ 0.52
Rtn4-203ENSMUST00000102841 Mapk8ip2Q9ERE9 830 aa18.26■□□□□ 0.51
Rtn4-203ENSMUST00000102841 Pelp1Q9DBD5 1123 aaKnown RBP18.21■□□□□ 0.51
Rtn4-203ENSMUST00000102841 Fam71e1A1L3C1 212 aa18.2■□□□□ 0.5
Rtn4-203ENSMUST00000102841 Ap3b1Q9Z1T1 1105 aa18.17■□□□□ 0.5
Rtn4-203ENSMUST00000102841 Plekhg3Q4VAC9 1341 aa18.16■□□□□ 0.5
Rtn4-203ENSMUST00000102841 Ccdc88bQ4QRL3 1481 aa18.13■□□□□ 0.49
Rtn4-203ENSMUST00000102841 SafbD3YXK2 937 aaKnown RBP18.12■□□□□ 0.49
Rtn4-203ENSMUST00000102841 Slc24a1Q91WD8 1130 aa18.11■□□□□ 0.49
Rtn4-203ENSMUST00000102841 Stra8P70278 393 aa18.11■□□□□ 0.49
Rtn4-203ENSMUST00000102841 Eid3Q3V124 375 aa18.11■□□□□ 0.49
Rtn4-203ENSMUST00000102841 ScribQ80U72 1612 aa18.1■□□□□ 0.49
Rtn4-203ENSMUST00000102841 Bcl11aQ9QYE3 773 aa18.08■□□□□ 0.49
Rtn4-203ENSMUST00000102841 Brd4Q9ESU6 1400 aaKnown RBP18.08■□□□□ 0.48
Rtn4-203ENSMUST00000102841 Hnrnpul2Q00PI9 745 aaKnown RBP18.08■□□□□ 0.48
Rtn4-203ENSMUST00000102841 Kdm5dQ62240 1548 aa18.06■□□□□ 0.48
Rtn4-203ENSMUST00000102841 Anp32aO35381 247 aa18.03■□□□□ 0.48
Rtn4-203ENSMUST00000102841 Golga3P55937 1487 aa18■□□□□ 0.47
Rtn4-203ENSMUST00000102841 NclP09405 707 aaKnown RBP17.98■□□□□ 0.47
Rtn4-203ENSMUST00000102841 Ttbk1Q6PCN3 1308 aa17.97■□□□□ 0.47
Rtn4-203ENSMUST00000102841 NacadQ5SWP3 1504 aa17.92■□□□□ 0.46
Rtn4-203ENSMUST00000102841 Ube2uB1AUC4 352 aa17.91■□□□□ 0.46
Rtn4-203ENSMUST00000102841 Clip1Q922J3 1391 aa17.9■□□□□ 0.46
Rtn4-203ENSMUST00000102841 Fam50aQ9WV03 339 aaKnown RBP17.86■□□□□ 0.45
Rtn4-203ENSMUST00000102841 Smarca2Q6DIC0 1577 aa17.86■□□□□ 0.45
Rtn4-203ENSMUST00000102841 Rtl5Q5DTT4 599 aa17.84■□□□□ 0.45
Rtn4-203ENSMUST00000102841 Eif5bQ05D44 1216 aaKnown RBP17.84■□□□□ 0.45
Rtn4-203ENSMUST00000102841 Calr4Q3TQS0 420 aa17.79■□□□□ 0.44
Rtn4-203ENSMUST00000102841 Il27Q8K3I6 234 aa17.7■□□□□ 0.42
Rtn4-203ENSMUST00000102841 Ppp4r2Q0VGB7 417 aa17.65■□□□□ 0.42
Rtn4-203ENSMUST00000102841 Amer1Q7TS75 1132 aa17.64■□□□□ 0.41
Rtn4-203ENSMUST00000102841 Crybg2B7ZCC2 1516 aa17.61■□□□□ 0.41
Rtn4-203ENSMUST00000102841 Cecr2E9Q2Z1 1453 aa17.61■□□□□ 0.41
Rtn4-203ENSMUST00000102841 Ifnlr1Q8CGK5 535 aa17.6■□□□□ 0.41
Rtn4-203ENSMUST00000102841 Cep162Q6ZQ06 1403 aa17.6■□□□□ 0.41
Rtn4-203ENSMUST00000102841 PrkcshO08795 521 aa17.57■□□□□ 0.4
Rtn4-203ENSMUST00000102841 Lmod2Q3UHZ5 550 aa17.56■□□□□ 0.4
Rtn4-203ENSMUST00000102841 Nolc1E9Q5C9 702 aaKnown RBP17.55■□□□□ 0.4
Rtn4-203ENSMUST00000102841 NrdcQ8BHG1 1161 aa17.55■□□□□ 0.4
Rtn4-203ENSMUST00000102841 Wdr43Q6ZQL4 677 aaKnown RBP17.54■□□□□ 0.4
Rtn4-203ENSMUST00000102841 Synj1Q8CHC4 1574 aa17.5■□□□□ 0.39
Rtn4-203ENSMUST00000102841 Rapgef2Q8CHG7 1496 aa17.49■□□□□ 0.39
Rtn4-203ENSMUST00000102841 Supt16hQ920B9 1047 aa17.48■□□□□ 0.39
Rtn4-203ENSMUST00000102841 Sycp2Q9CUU3 1500 aa17.45■□□□□ 0.38
Rtn4-203ENSMUST00000102841 Znf710Q3U288 666 aa17.45■□□□□ 0.38
Rtn4-203ENSMUST00000102841 4933416C03RikQ3V063 378 aa17.44■□□□□ 0.38
Rtn4-203ENSMUST00000102841 P3h3Q8CG70 732 aa17.4■□□□□ 0.38
Rtn4-203ENSMUST00000102841 CftrP26361 1476 aa17.4■□□□□ 0.38
Rtn4-203ENSMUST00000102841 Setd5Q5XJV7 1441 aa17.39■□□□□ 0.37
Rtn4-203ENSMUST00000102841 Mrs2Q5NCE8 434 aa17.37■□□□□ 0.37
Rtn4-203ENSMUST00000102841 BlmO88700 1416 aa17.37■□□□□ 0.37
Retrieved 100 of 22,080 RNA–protein pairs in 142.9 ms