RNA–Protein interactions for RNA: ENSMUST00000102774.10

Sqstm1-202, Transcript of Sequestosome-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sqstm1, Length 2,037 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sqstm1-202ENSMUST00000102774 Gpatch8A2A6A1 1505 aa29.99■■■□□ 2.39
Sqstm1-202ENSMUST00000102774 Polr1aO35134 1717 aaKnown RBP29.99■■■□□ 2.39
Sqstm1-202ENSMUST00000102774 Ankrd26Q811D2 1581 aa29.97■■■□□ 2.39
Sqstm1-202ENSMUST00000102774 Eea1Q8BL66 1411 aa29.96■■■□□ 2.39
Sqstm1-202ENSMUST00000102774 Cux1P53564 1515 aa29.96■■■□□ 2.39
Sqstm1-202ENSMUST00000102774 Rusc2Q80U22 1514 aa29.95■■■□□ 2.38
Sqstm1-202ENSMUST00000102774 EprsQ8CGC7 1512 aaKnown RBP29.95■■■□□ 2.38
Sqstm1-202ENSMUST00000102774 Erich3F6QRE9 1637 aa29.93■■■□□ 2.38
Sqstm1-202ENSMUST00000102774 Cc2d2bA0A286YDU8 1405 aa29.92■■■□□ 2.38
Sqstm1-202ENSMUST00000102774 Setd5Q5XJV7 1441 aa29.91■■■□□ 2.38
Sqstm1-202ENSMUST00000102774 WizO88286 1684 aaKnown RBP29.86■■■□□ 2.37
Sqstm1-202ENSMUST00000102774 Adamts12Q811B3 1600 aa29.85■■■□□ 2.37
Sqstm1-202ENSMUST00000102774 Rpap1Q80TE0 1409 aa29.84■■■□□ 2.37
Sqstm1-202ENSMUST00000102774 Fyco1Q8VDC1 1437 aa29.84■■■□□ 2.37
Sqstm1-202ENSMUST00000102774 Arap1Q4LDD4 1452 aa29.83■■■□□ 2.37
Sqstm1-202ENSMUST00000102774 TchhA0A0B4J1F9 1599 aa29.79■■■□□ 2.36
Sqstm1-202ENSMUST00000102774 Abca16E9PWJ7 1678 aa29.78■■■□□ 2.36
Sqstm1-202ENSMUST00000102774 Lmo7E9PYF4 1699 aaKnown RBP29.75■■■□□ 2.35
Sqstm1-202ENSMUST00000102774 Abca5Q8K448 1642 aa29.74■■■□□ 2.35
Sqstm1-202ENSMUST00000102774 CadpsQ80TJ1 1355 aa29.74■■■□□ 2.35
Sqstm1-202ENSMUST00000102774 Arhgef5E9Q7D5 1581 aa29.74■■■□□ 2.35
Sqstm1-202ENSMUST00000102774 Gm7298A0A0N4SVU1 1476 aa29.73■■■□□ 2.35
Sqstm1-202ENSMUST00000102774 Pcf11G3X9Z4 1553 aa29.73■■■□□ 2.35
Sqstm1-202ENSMUST00000102774 Ap3b1Q9Z1T1 1105 aa29.72■■■□□ 2.35
Sqstm1-202ENSMUST00000102774 PxdnQ3UQ28 1475 aa29.71■■■□□ 2.35
Sqstm1-202ENSMUST00000102774 Soga1E1U8D0 1418 aa29.62■■■□□ 2.33
Sqstm1-202ENSMUST00000102774 Abcc2Q8VI47 1543 aa29.6■■■□□ 2.33
Sqstm1-202ENSMUST00000102774 Plekhg3Q4VAC9 1341 aa29.58■■■□□ 2.33
Sqstm1-202ENSMUST00000102774 Tiam1Q60610 1591 aa29.57■■■□□ 2.32
Sqstm1-202ENSMUST00000102774 Aebp1Q640N1 1128 aa29.54■■■□□ 2.32
Sqstm1-202ENSMUST00000102774 Arhgap27A2AB59 869 aa29.53■■■□□ 2.32
Sqstm1-202ENSMUST00000102774 BlmO88700 1416 aa29.52■■■□□ 2.32
Sqstm1-202ENSMUST00000102774 CntlnA2AM05 1397 aa29.5■■■□□ 2.31
Sqstm1-202ENSMUST00000102774 Naip1Q9QWK5 1403 aa29.49■■■□□ 2.31
Sqstm1-202ENSMUST00000102774 Slx4Q6P1D7 1565 aa29.49■■■□□ 2.31
Sqstm1-202ENSMUST00000102774 Map3k4O08648 1597 aa29.46■■■□□ 2.31
Sqstm1-202ENSMUST00000102774 Peg3Q3URU2 1571 aa29.45■■■□□ 2.31
Sqstm1-202ENSMUST00000102774 Dnmt1P13864 1620 aaKnown RBP29.45■■■□□ 2.3
Sqstm1-202ENSMUST00000102774 Fgd6Q69ZL1 1399 aa29.43■■■□□ 2.3
Sqstm1-202ENSMUST00000102774 Shroom2A2ALU4 1481 aa29.42■■■□□ 2.3
Sqstm1-202ENSMUST00000102774 WrnO09053 1401 aa29.41■■■□□ 2.3
Sqstm1-202ENSMUST00000102774 BC005561E9Q5E2 1589 aa29.39■■■□□ 2.3
Sqstm1-202ENSMUST00000102774 UbtfP25976 765 aaKnown RBP29.38■■■□□ 2.29
Sqstm1-202ENSMUST00000102774 Kif27Q7M6Z4 1394 aa29.33■■■□□ 2.29
Sqstm1-202ENSMUST00000102774 AknaQ80VW7 1404 aa29.32■■■□□ 2.28
Sqstm1-202ENSMUST00000102774 Neo1P97798 1493 aa29.3■■■□□ 2.28
Sqstm1-202ENSMUST00000102774 Acin1Q9JIX8 1338 aaKnown RBP29.28■■■□□ 2.28
Sqstm1-202ENSMUST00000102774 Lmod2Q3UHZ5 550 aa29.28■■■□□ 2.28
Sqstm1-202ENSMUST00000102774 Gm1043A0A140LJC2 1431 aa29.27■■■□□ 2.28
Sqstm1-202ENSMUST00000102774 Rapgef6Q5NCJ1 1609 aa29.23■■■□□ 2.27
Sqstm1-202ENSMUST00000102774 Zcchc11B2RX14 1644 aaKnown RBP29.22■■■□□ 2.27
Sqstm1-202ENSMUST00000102774 Abcc1O35379 1528 aa29.15■■■□□ 2.26
Sqstm1-202ENSMUST00000102774 Arhgef12Q8R4H2 1543 aaKnown RBP29.15■■■□□ 2.26
Sqstm1-202ENSMUST00000102774 Chd1P40201 1711 aa29.15■■■□□ 2.26
Sqstm1-202ENSMUST00000102774 Rrbp1Q99PL5 1605 aaKnown RBP29.13■■■□□ 2.25
Sqstm1-202ENSMUST00000102774 Arhgap31A6X8Z5 1425 aa29.13■■■□□ 2.25
Sqstm1-202ENSMUST00000102774 Jph4Q80WT0 628 aa29.12■■■□□ 2.25
Sqstm1-202ENSMUST00000102774 Ccdc141E9Q8Q6 1531 aa29.09■■■□□ 2.25
Sqstm1-202ENSMUST00000102774 Gm14025A2AP89 1413 aa29.09■■■□□ 2.25
Sqstm1-202ENSMUST00000102774 Arhgef11Q68FM7 1552 aa29.07■■■□□ 2.24
Sqstm1-202ENSMUST00000102774 Ncoa2Q61026 1462 aa29.05■■■□□ 2.24
Sqstm1-202ENSMUST00000102774 Mier1Q5UAK0 511 aa29.05■■■□□ 2.24
Sqstm1-202ENSMUST00000102774 NexmifQ5DTT1 1515 aa29.02■■■□□ 2.24
Sqstm1-202ENSMUST00000102774 Mroh2aD3Z750 1679 aa29.02■■■□□ 2.24
Sqstm1-202ENSMUST00000102774 Mug1P28665 1476 aa29.02■■■□□ 2.24
Sqstm1-202ENSMUST00000102774 Pelp1Q9DBD5 1123 aaKnown RBP29.02■■■□□ 2.24
Sqstm1-202ENSMUST00000102774 Ncapd3Q6ZQK0 1506 aa29.01■■■□□ 2.23
Sqstm1-202ENSMUST00000102774 Ncoa3O09000 1398 aa29■■■□□ 2.23
Sqstm1-202ENSMUST00000102774 Lmtk2Q3TYD6 1471 aa29■■■□□ 2.23
Sqstm1-202ENSMUST00000102774 Pabpn1Q8CCS6 302 aaKnown RBP28.98■■■□□ 2.23
Sqstm1-202ENSMUST00000102774 Cdc42bpaQ3UU96 1719 aa28.97■■■□□ 2.23
Sqstm1-202ENSMUST00000102774 Gcc2Q8CHG3 1679 aa28.96■■■□□ 2.23
Sqstm1-202ENSMUST00000102774 Fkbp15Q6P9Q6 1216 aaKnown RBP28.94■■■□□ 2.22
Sqstm1-202ENSMUST00000102774 Magi1Q6RHR9 1471 aa28.94■■■□□ 2.22
Sqstm1-202ENSMUST00000102774 Ccnb3Q810T2 1396 aa28.94■■■□□ 2.22
Sqstm1-202ENSMUST00000102774 Rpgrip1Q9EPQ2 1331 aa28.93■■■□□ 2.22
Sqstm1-202ENSMUST00000102774 Kiaa1551Q5DTW7 1521 aa28.89■■■□□ 2.22
Sqstm1-202ENSMUST00000102774 3425401B19RikD3Z1D3 1412 aa28.88■■■□□ 2.21
Sqstm1-202ENSMUST00000102774 Dhx57Q6P5D3 1388 aaKnown RBP28.88■■■□□ 2.21
Sqstm1-202ENSMUST00000102774 Prex2Q3LAC4 1598 aa28.85■■■□□ 2.21
Sqstm1-202ENSMUST00000102774 Cul7Q8VE73 1689 aa28.84■■■□□ 2.21
Sqstm1-202ENSMUST00000102774 Kdm5bQ80Y84 1544 aa28.84■■■□□ 2.21
Sqstm1-202ENSMUST00000102774 Ythdc2B2RR83 1445 aaKnown RBP28.84■■■□□ 2.21
Sqstm1-202ENSMUST00000102774 Gapvd1Q6PAR5 1458 aa28.83■■■□□ 2.21
Sqstm1-202ENSMUST00000102774 Fam163aQ8CAA5 168 aa28.82■■■□□ 2.2
Sqstm1-202ENSMUST00000102774 Fancd2Q80V62 1450 aa28.81■■■□□ 2.2
Sqstm1-202ENSMUST00000102774 Mapkbp1Q6NS57 1503 aa28.79■■■□□ 2.2
Sqstm1-202ENSMUST00000102774 NhsB1AV60 1647 aa28.76■■■□□ 2.19
Sqstm1-202ENSMUST00000102774 PtprtQ99M80 1454 aa28.75■■■□□ 2.19
Sqstm1-202ENSMUST00000102774 Cep170Q6A065 1588 aa28.74■■■□□ 2.19
Sqstm1-202ENSMUST00000102774 Adcy10Q8C0T9 1614 aa28.71■■■□□ 2.19
Sqstm1-202ENSMUST00000102774 Kiaa1210E9Q0C6 1637 aa28.7■■■□□ 2.19
Sqstm1-202ENSMUST00000102774 A2mQ6GQT1 1474 aa28.7■■■□□ 2.18
Sqstm1-202ENSMUST00000102774 Arhgef40Q3UPH7 1517 aa28.66■■■□□ 2.18
Sqstm1-202ENSMUST00000102774 Fam50aQ9WV03 339 aaKnown RBP28.66■■■□□ 2.18
Sqstm1-202ENSMUST00000102774 Fam208aQ69ZR9 1610 aaKnown RBP28.66■■■□□ 2.18
Sqstm1-202ENSMUST00000102774 Igf1rQ60751 1373 aa28.62■■■□□ 2.17
Sqstm1-202ENSMUST00000102774 Wdr7Q920I9 1489 aa28.61■■■□□ 2.17
Sqstm1-202ENSMUST00000102774 Naip2Q9QUK4 1447 aa28.6■■■□□ 2.17
Sqstm1-202ENSMUST00000102774 Kdm6bQ5NCY0 1641 aa28.6■■■□□ 2.17
Retrieved 100 of 22,080 RNA–protein pairs in 14.7 ms