RNA–Protein interactions for RNA: ENSMUST00000101616.8

Smarca1-203, Transcript of Probable global transcription activator SNF2L1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Smarca1, Length 3,991 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca1-203ENSMUST00000101616 Brd4Q9ESU6 1400 aaKnown RBP11.25□□□□□ -0.61
Smarca1-203ENSMUST00000101616 Rb1cc1Q9ESK9 1588 aa11.25□□□□□ -0.61
Smarca1-203ENSMUST00000101616 Irx3P81067 507 aa11.22□□□□□ -0.61
Smarca1-203ENSMUST00000101616 BlmO88700 1416 aa11.22□□□□□ -0.61
Smarca1-203ENSMUST00000101616 Ofd1Q80Z25 1017 aa11.22□□□□□ -0.61
Smarca1-203ENSMUST00000101616 Rangap1P46061 589 aaKnown RBP11.21□□□□□ -0.61
Smarca1-203ENSMUST00000101616 Ccdc9Q8VC31 543 aaKnown RBP11.21□□□□□ -0.61
Smarca1-203ENSMUST00000101616 Wwc2Q6NXJ0 1187 aa11.21□□□□□ -0.62
Smarca1-203ENSMUST00000101616 Ythdc1E9Q5K9 736 aaKnown RBP11.2□□□□□ -0.62
Smarca1-203ENSMUST00000101616 Sin3aQ60520 1274 aaKnown RBP11.19□□□□□ -0.62
Smarca1-203ENSMUST00000101616 NacadQ5SWP3 1504 aa11.19□□□□□ -0.62
Smarca1-203ENSMUST00000101616 Hspa5P20029 655 aaKnown RBP11.18□□□□□ -0.62
Smarca1-203ENSMUST00000101616 Vsig10D3YX43 558 aa11.17□□□□□ -0.62
Smarca1-203ENSMUST00000101616 Ccer2J3QPU5 274 aa11.16□□□□□ -0.62
Smarca1-203ENSMUST00000101616 Baz1aO88379 1555 aa11.16□□□□□ -0.62
Smarca1-203ENSMUST00000101616 Upf2A2AT37 1269 aaKnown RBP11.16□□□□□ -0.62
Smarca1-203ENSMUST00000101616 Ccdc88bQ4QRL3 1481 aa11.15□□□□□ -0.62
Smarca1-203ENSMUST00000101616 Spryd3E9Q9B3 442 aa11.15□□□□□ -0.62
Smarca1-203ENSMUST00000101616 Dbr1Q923B1 550 aa11.15□□□□□ -0.62
Smarca1-203ENSMUST00000101616 Trim30dE9PWL0 497 aa11.14□□□□□ -0.63
Smarca1-203ENSMUST00000101616 B4galnt3Q6L8S8 986 aa11.13□□□□□ -0.63
Smarca1-203ENSMUST00000101616 Setd5Q5XJV7 1441 aa11.13□□□□□ -0.63
Smarca1-203ENSMUST00000101616 Apbb1Q9QXJ1 710 aa11.13□□□□□ -0.63
Smarca1-203ENSMUST00000101616 Nlrp6Q91WS2 869 aa11.12□□□□□ -0.63
Smarca1-203ENSMUST00000101616 Hdac5Q9Z2V6 1113 aa11.11□□□□□ -0.63
Smarca1-203ENSMUST00000101616 Arid4bA2CG63 1314 aaKnown RBP11.11□□□□□ -0.63
Smarca1-203ENSMUST00000101616 Lmod3E9QA62 571 aa11.11□□□□□ -0.63
Smarca1-203ENSMUST00000101616 Npm1Q61937 292 aaKnown RBP11.11□□□□□ -0.63
Smarca1-203ENSMUST00000101616 Golga3P55937 1487 aa11.09□□□□□ -0.63
Smarca1-203ENSMUST00000101616 Erich6D3Z6S9 713 aa11.09□□□□□ -0.63
Smarca1-203ENSMUST00000101616 Rgl3Q3UYI5 709 aa11.09□□□□□ -0.63
Smarca1-203ENSMUST00000101616 Smarca2Q6DIC0 1577 aa11.08□□□□□ -0.64
Smarca1-203ENSMUST00000101616 Gtf3c3Q3TMP1 882 aa11.08□□□□□ -0.64
Smarca1-203ENSMUST00000101616 Sycp2Q9CUU3 1500 aa11.08□□□□□ -0.64
Smarca1-203ENSMUST00000101616 Hsp90ab1P11499 724 aaKnown RBP11.07□□□□□ -0.64
Smarca1-203ENSMUST00000101616 DekQ7TNV0 380 aaKnown RBP11.07□□□□□ -0.64
Smarca1-203ENSMUST00000101616 BicraF8VPZ9 1578 aa11.06□□□□□ -0.64
Smarca1-203ENSMUST00000101616 ChgaP26339 463 aaKnown RBP11.06□□□□□ -0.64
Smarca1-203ENSMUST00000101616 Gm13697A2AK42 830 aa11.05□□□□□ -0.64
Smarca1-203ENSMUST00000101616 Taok2Q6ZQ29 1240 aa11.05□□□□□ -0.64
Smarca1-203ENSMUST00000101616 Tcerg1Q8CGF7 1100 aaKnown RBP11.04□□□□□ -0.64
Smarca1-203ENSMUST00000101616 Trim26Q99PN3 545 aa11.04□□□□□ -0.64
Smarca1-203ENSMUST00000101616 Exoc6Q8R313 802 aa11.03□□□□□ -0.64
Smarca1-203ENSMUST00000101616 Grwd1Q810D6 446 aaKnown RBP11.03□□□□□ -0.64
Smarca1-203ENSMUST00000101616 Fkbp15Q6P9Q6 1216 aaKnown RBP11.02□□□□□ -0.64
Smarca1-203ENSMUST00000101616 Plcd4Q8K3R3 807 aa11.01□□□□□ -0.65
Smarca1-203ENSMUST00000101616 Ipo9Q91YE6 1041 aa11.01□□□□□ -0.65
Smarca1-203ENSMUST00000101616 Znf710Q3U288 666 aa11□□□□□ -0.65
Smarca1-203ENSMUST00000101616 Pak3Q61036 559 aa11□□□□□ -0.65
Smarca1-203ENSMUST00000101616 Trim44Q9QXA7 346 aa11□□□□□ -0.65
Smarca1-203ENSMUST00000101616 Armcx1Q9CX83 456 aa10.98□□□□□ -0.65
Smarca1-203ENSMUST00000101616 Neurod2Q62414 383 aa10.97□□□□□ -0.65
Smarca1-203ENSMUST00000101616 Eea1Q8BL66 1411 aa10.97□□□□□ -0.65
Smarca1-203ENSMUST00000101616 Plcb2A3KGF7 1181 aa10.96□□□□□ -0.66
Smarca1-203ENSMUST00000101616 Ppm1gQ61074 542 aa10.94□□□□□ -0.66
Smarca1-203ENSMUST00000101616 Dnttip2Q8R2M2 758 aaKnown RBP10.93□□□□□ -0.66
Smarca1-203ENSMUST00000101616 Pknox2Q8BG99 474 aa10.93□□□□□ -0.66
Smarca1-203ENSMUST00000101616 Chmp5Q9D7S9 219 aa10.93□□□□□ -0.66
Smarca1-203ENSMUST00000101616 AU015836B2RUM3 263 aa10.92□□□□□ -0.66
Smarca1-203ENSMUST00000101616 Cep162Q6ZQ06 1403 aa10.91□□□□□ -0.66
Smarca1-203ENSMUST00000101616 Dnai1Q8C0M8 701 aa10.91□□□□□ -0.66
Smarca1-203ENSMUST00000101616 Card11Q8CIS0 1159 aa10.91□□□□□ -0.66
Smarca1-203ENSMUST00000101616 Htatsf1Q8BGC0 757 aa10.91□□□□□ -0.66
Smarca1-203ENSMUST00000101616 Rtn4Q99P72 1162 aaKnown RBP10.88□□□□□ -0.67
Smarca1-203ENSMUST00000101616 Atp1b4Q99ME6 356 aa10.86□□□□□ -0.67
Smarca1-203ENSMUST00000101616 Smg6P61406 1418 aaKnown RBP10.84□□□□□ -0.67
Smarca1-203ENSMUST00000101616 PtmaP26350 111 aa10.83□□□□□ -0.68
Smarca1-203ENSMUST00000101616 Kdm2aP59997 1161 aa10.83□□□□□ -0.68
Smarca1-203ENSMUST00000101616 Sart3Q9JLI8 962 aaKnown RBP10.83□□□□□ -0.68
Smarca1-203ENSMUST00000101616 Cwc22Q8C5N3 908 aaKnown RBP10.82□□□□□ -0.68
Smarca1-203ENSMUST00000101616 Pkd2O35245 966 aa10.82□□□□□ -0.68
Smarca1-203ENSMUST00000101616 Gm6268A2A3U9 297 aa10.81□□□□□ -0.68
Smarca1-203ENSMUST00000101616 Rundc1Q0VDN7 615 aa10.81□□□□□ -0.68
Smarca1-203ENSMUST00000101616 Ecm2Q5FW85 670 aa10.81□□□□□ -0.68
Smarca1-203ENSMUST00000101616 Gm13695A2AK44 830 aa10.8□□□□□ -0.68
Smarca1-203ENSMUST00000101616 Rwdd1Q9CQK7 243 aa10.8□□□□□ -0.68
Smarca1-203ENSMUST00000101616 Baz1bQ9Z277 1479 aa10.8□□□□□ -0.68
Smarca1-203ENSMUST00000101616 Kcnh8P59111 1102 aa10.8□□□□□ -0.68
Smarca1-203ENSMUST00000101616 IbspQ61711 324 aa10.8□□□□□ -0.68
Smarca1-203ENSMUST00000101616 EspnQ9ET47 871 aa10.8□□□□□ -0.68
Smarca1-203ENSMUST00000101616 CatipB9EKE5 520 aa10.78□□□□□ -0.68
Smarca1-203ENSMUST00000101616 Zscan21Q07231 555 aa10.77□□□□□ -0.68
Smarca1-203ENSMUST00000101616 Erich6bQ9D4S6 220 aa10.77□□□□□ -0.69
Smarca1-203ENSMUST00000101616 Mia2Q91ZV0 1396 aa10.77□□□□□ -0.69
Smarca1-203ENSMUST00000101616 Znf692Q3U381 531 aa10.76□□□□□ -0.69
Smarca1-203ENSMUST00000101616 Rapgef2Q8CHG7 1496 aa10.76□□□□□ -0.69
Smarca1-203ENSMUST00000101616 Mphosph9A6H5Y1 991 aa10.75□□□□□ -0.69
Smarca1-203ENSMUST00000101616 Mak16Q8BGS0 296 aaKnown RBP10.75□□□□□ -0.69
Smarca1-203ENSMUST00000101616 CrbnQ8C7D2 445 aa10.75□□□□□ -0.69
Smarca1-203ENSMUST00000101616 Speer4f1Q9D5Q6 258 aa10.75□□□□□ -0.69
Smarca1-203ENSMUST00000101616 Cluap1Q8R3P7 413 aa10.75□□□□□ -0.69
Smarca1-203ENSMUST00000101616 Ubl4bQ9CQ84 188 aa10.74□□□□□ -0.69
Smarca1-203ENSMUST00000101616 SlkO54988 1233 aa10.74□□□□□ -0.69
Smarca1-203ENSMUST00000101616 Ipo8Q7TMY7 1010 aa10.73□□□□□ -0.69
Smarca1-203ENSMUST00000101616 Eif2s2Q99L45 331 aaKnown RBP10.73□□□□□ -0.69
Smarca1-203ENSMUST00000101616 Slc4a2P13808 1237 aaKnown RBP10.72□□□□□ -0.69
Smarca1-203ENSMUST00000101616 Kif15Q6P9L6 1387 aa10.72□□□□□ -0.69
Smarca1-203ENSMUST00000101616 Cabp1Q9JLK7 227 aa10.72□□□□□ -0.69
Smarca1-203ENSMUST00000101616 CntlnA2AM05 1397 aa10.7□□□□□ -0.7
Smarca1-203ENSMUST00000101616 Cnga1P29974 684 aa10.7□□□□□ -0.7
Retrieved 100 of 22,080 RNA–protein pairs in 13.1 ms