RNA–Protein interactions for RNA: ENSMUST00000077853.4

Prpf4b-201, Transcript of Serine/threonine-protein kinase PRP4 homolog, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Prpf4b, Length 7,844 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf4b-201ENSMUST00000077853 NacadQ5SWP3 1504 aa11.64□□□□□ -0.55
Prpf4b-201ENSMUST00000077853 Fkbp15Q6P9Q6 1216 aaKnown RBP11.63□□□□□ -0.55
Prpf4b-201ENSMUST00000077853 Ofd1Q80Z25 1017 aa11.63□□□□□ -0.55
Prpf4b-201ENSMUST00000077853 CanxP35564 591 aaKnown RBP11.62□□□□□ -0.55
Prpf4b-201ENSMUST00000077853 Gm13697A2AK42 830 aa11.62□□□□□ -0.55
Prpf4b-201ENSMUST00000077853 Clstn2Q9ER65 966 aa11.62□□□□□ -0.55
Prpf4b-201ENSMUST00000077853 Ccdc27Q3V036 639 aa11.61□□□□□ -0.55
Prpf4b-201ENSMUST00000077853 Atp1b4Q99ME6 356 aa11.61□□□□□ -0.55
Prpf4b-201ENSMUST00000077853 Eea1Q8BL66 1411 aa11.6□□□□□ -0.55
Prpf4b-201ENSMUST00000077853 Ifnlr1Q8CGK5 535 aa11.6□□□□□ -0.55
Prpf4b-201ENSMUST00000077853 SafbD3YXK2 937 aaKnown RBP11.59□□□□□ -0.55
Prpf4b-201ENSMUST00000077853 P3h3Q8CG70 732 aa11.56□□□□□ -0.56
Prpf4b-201ENSMUST00000077853 Rgl3Q3UYI5 709 aa11.56□□□□□ -0.56
Prpf4b-201ENSMUST00000077853 Bcl11aQ9QYE3 773 aa11.56□□□□□ -0.56
Prpf4b-201ENSMUST00000077853 Ubl4bQ9CQ84 188 aa11.55□□□□□ -0.56
Prpf4b-201ENSMUST00000077853 Hsp90ab1P11499 724 aaKnown RBP11.55□□□□□ -0.56
Prpf4b-201ENSMUST00000077853 Cwc22Q8C5N3 908 aaKnown RBP11.52□□□□□ -0.57
Prpf4b-201ENSMUST00000077853 Trim30dE9PWL0 497 aa11.51□□□□□ -0.57
Prpf4b-201ENSMUST00000077853 Mia2Q91ZV0 1396 aa11.5□□□□□ -0.57
Prpf4b-201ENSMUST00000077853 DekQ7TNV0 380 aaKnown RBP11.49□□□□□ -0.57
Prpf4b-201ENSMUST00000077853 Kif15Q6P9L6 1387 aa11.48□□□□□ -0.57
Prpf4b-201ENSMUST00000077853 Card11Q8CIS0 1159 aa11.48□□□□□ -0.57
Prpf4b-201ENSMUST00000077853 Ppm1gQ61074 542 aa11.48□□□□□ -0.57
Prpf4b-201ENSMUST00000077853 Rangap1P46061 589 aaKnown RBP11.47□□□□□ -0.57
Prpf4b-201ENSMUST00000077853 Ccdc88bQ4QRL3 1481 aa11.47□□□□□ -0.57
Prpf4b-201ENSMUST00000077853 Trim44Q9QXA7 346 aa11.45□□□□□ -0.58
Prpf4b-201ENSMUST00000077853 Cep162Q6ZQ06 1403 aa11.45□□□□□ -0.58
Prpf4b-201ENSMUST00000077853 Hspa5P20029 655 aaKnown RBP11.45□□□□□ -0.58
Prpf4b-201ENSMUST00000077853 Htatsf1Q8BGC0 757 aa11.45□□□□□ -0.58
Prpf4b-201ENSMUST00000077853 Gm13695A2AK44 830 aa11.45□□□□□ -0.58
Prpf4b-201ENSMUST00000077853 Irx3P81067 507 aa11.44□□□□□ -0.58
Prpf4b-201ENSMUST00000077853 Grwd1Q810D6 446 aaKnown RBP11.42□□□□□ -0.58
Prpf4b-201ENSMUST00000077853 Vsig10D3YX43 558 aa11.42□□□□□ -0.58
Prpf4b-201ENSMUST00000077853 Trim26Q99PN3 545 aa11.41□□□□□ -0.58
Prpf4b-201ENSMUST00000077853 Tcerg1Q8CGF7 1100 aaKnown RBP11.41□□□□□ -0.58
Prpf4b-201ENSMUST00000077853 Apbb1Q9QXJ1 710 aa11.4□□□□□ -0.58
Prpf4b-201ENSMUST00000077853 Fgd1P52734 960 aa11.4□□□□□ -0.58
Prpf4b-201ENSMUST00000077853 Mbd3Q9Z2D8 285 aaKnown RBP11.39□□□□□ -0.59
Prpf4b-201ENSMUST00000077853 Ccdc18Q640L5 1455 aa11.39□□□□□ -0.59
Prpf4b-201ENSMUST00000077853 Supt16hQ920B9 1047 aa11.38□□□□□ -0.59
Prpf4b-201ENSMUST00000077853 Wwc2Q6NXJ0 1187 aa11.38□□□□□ -0.59
Prpf4b-201ENSMUST00000077853 Plcb2A3KGF7 1181 aa11.37□□□□□ -0.59
Prpf4b-201ENSMUST00000077853 Mtus2Q3UHD3 1353 aa11.37□□□□□ -0.59
Prpf4b-201ENSMUST00000077853 Dbr1Q923B1 550 aa11.37□□□□□ -0.59
Prpf4b-201ENSMUST00000077853 Exoc6Q8R313 802 aa11.36□□□□□ -0.59
Prpf4b-201ENSMUST00000077853 Neurod2Q62414 383 aa11.35□□□□□ -0.59
Prpf4b-201ENSMUST00000077853 PtmaP26350 111 aa11.35□□□□□ -0.59
Prpf4b-201ENSMUST00000077853 B4galnt3Q6L8S8 986 aa11.35□□□□□ -0.59
Prpf4b-201ENSMUST00000077853 Slc4a3P16283 1227 aa11.34□□□□□ -0.59
Prpf4b-201ENSMUST00000077853 Sin3aQ60520 1274 aaKnown RBP11.34□□□□□ -0.59
Prpf4b-201ENSMUST00000077853 CatipB9EKE5 520 aa11.34□□□□□ -0.59
Prpf4b-201ENSMUST00000077853 Kdm5dQ62240 1548 aa11.33□□□□□ -0.6
Prpf4b-201ENSMUST00000077853 Arid4bA2CG63 1314 aaKnown RBP11.33□□□□□ -0.6
Prpf4b-201ENSMUST00000077853 Ythdc1E9Q5K9 736 aaKnown RBP11.33□□□□□ -0.6
Prpf4b-201ENSMUST00000077853 Ipo9Q91YE6 1041 aa11.32□□□□□ -0.6
Prpf4b-201ENSMUST00000077853 Mroh3A0A1D5RM54 893 aa11.32□□□□□ -0.6
Prpf4b-201ENSMUST00000077853 Srpk2O54781 681 aaKnown RBP11.32□□□□□ -0.6
Prpf4b-201ENSMUST00000077853 Lmod3E9QA62 571 aa11.32□□□□□ -0.6
Prpf4b-201ENSMUST00000077853 Fmn1Q05860 1466 aa11.31□□□□□ -0.6
Prpf4b-201ENSMUST00000077853 Kdm2aP59997 1161 aa11.31□□□□□ -0.6
Prpf4b-201ENSMUST00000077853 Baz1bQ9Z277 1479 aa11.31□□□□□ -0.6
Prpf4b-201ENSMUST00000077853 Pkd2O35245 966 aa11.31□□□□□ -0.6
Prpf4b-201ENSMUST00000077853 Map7O88735 730 aa11.3□□□□□ -0.6
Prpf4b-201ENSMUST00000077853 Rwdd1Q9CQK7 243 aa11.3□□□□□ -0.6
Prpf4b-201ENSMUST00000077853 Mapk8ip3Q9ESN9 1337 aa11.29□□□□□ -0.6
Prpf4b-201ENSMUST00000077853 IqubQ8CDK3 788 aa11.29□□□□□ -0.6
Prpf4b-201ENSMUST00000077853 Nolc1E9Q5C9 702 aaKnown RBP11.29□□□□□ -0.6
Prpf4b-201ENSMUST00000077853 Gm20521D3Z5F7 333 aa11.28□□□□□ -0.6
Prpf4b-201ENSMUST00000077853 Chmp4bQ9D8B3 224 aaKnown RBP11.28□□□□□ -0.6
Prpf4b-201ENSMUST00000077853 Rundc1Q0VDN7 615 aa11.27□□□□□ -0.6
Prpf4b-201ENSMUST00000077853 Dnai1Q8C0M8 701 aa11.27□□□□□ -0.61
Prpf4b-201ENSMUST00000077853 AU015836B2RUM3 263 aa11.27□□□□□ -0.61
Prpf4b-201ENSMUST00000077853 Ercc6F8VPZ5 1481 aa11.26□□□□□ -0.61
Prpf4b-201ENSMUST00000077853 Armcx1Q9CX83 456 aa11.26□□□□□ -0.61
Prpf4b-201ENSMUST00000077853 Arhgap35Q91YM2 1499 aa11.26□□□□□ -0.61
Prpf4b-201ENSMUST00000077853 Arhgap27A2AB59 869 aa11.26□□□□□ -0.61
Prpf4b-201ENSMUST00000077853 Rrp7aQ9D1C9 280 aaKnown RBP11.26□□□□□ -0.61
Prpf4b-201ENSMUST00000077853 Fyco1Q8VDC1 1437 aa11.25□□□□□ -0.61
Prpf4b-201ENSMUST00000077853 Chmp5Q9D7S9 219 aa11.25□□□□□ -0.61
Prpf4b-201ENSMUST00000077853 NudcO35685 332 aaKnown RBP11.25□□□□□ -0.61
Prpf4b-201ENSMUST00000077853 Mak16Q8BGS0 296 aaKnown RBP11.25□□□□□ -0.61
Prpf4b-201ENSMUST00000077853 CntlnA2AM05 1397 aa11.24□□□□□ -0.61
Prpf4b-201ENSMUST00000077853 EspnQ9ET47 871 aa11.24□□□□□ -0.61
Prpf4b-201ENSMUST00000077853 Mphosph9A6H5Y1 991 aa11.24□□□□□ -0.61
Prpf4b-201ENSMUST00000077853 Zscan21Q07231 555 aa11.23□□□□□ -0.61
Prpf4b-201ENSMUST00000077853 Spryd3E9Q9B3 442 aa11.23□□□□□ -0.61
Prpf4b-201ENSMUST00000077853 Kif27Q7M6Z4 1394 aa11.23□□□□□ -0.61
Prpf4b-201ENSMUST00000077853 Aebp1Q640N1 1128 aa11.22□□□□□ -0.61
Prpf4b-201ENSMUST00000077853 Map4P27546 1125 aaKnown RBP11.22□□□□□ -0.61
Prpf4b-201ENSMUST00000077853 KnstrnQ9D9Z1 312 aaKnown RBP11.22□□□□□ -0.61
Prpf4b-201ENSMUST00000077853 Dnttip2Q8R2M2 758 aaKnown RBP11.21□□□□□ -0.61
Prpf4b-201ENSMUST00000077853 Gm6268A2A3U9 297 aa11.2□□□□□ -0.62
Prpf4b-201ENSMUST00000077853 Speer4f1Q9D5Q6 258 aa11.2□□□□□ -0.62
Prpf4b-201ENSMUST00000077853 Exosc9Q9JHI7 438 aaKnown RBP11.2□□□□□ -0.62
Prpf4b-201ENSMUST00000077853 Fhad1A6PWD2 1420 aa11.2□□□□□ -0.62
Prpf4b-201ENSMUST00000077853 Ipo8Q7TMY7 1010 aa11.17□□□□□ -0.62
Prpf4b-201ENSMUST00000077853 Stag3O70576 1240 aa11.17□□□□□ -0.62
Prpf4b-201ENSMUST00000077853 CftrP26361 1476 aa11.17□□□□□ -0.62
Prpf4b-201ENSMUST00000077853 Casc1Q6TDU8 730 aa11.16□□□□□ -0.62
Prpf4b-201ENSMUST00000077853 Cabp1Q9JLK7 227 aa11.16□□□□□ -0.62
Retrieved 100 of 22,080 RNA–protein pairs in 11.9 ms