RNA–Protein interactions for RNA: ENSMUST00000072755.11

Col18a1-201, Transcript of Collagen alpha-1(XVIII) chain, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Col18a1, Length 5,595 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1-201ENSMUST00000072755 Rsf1E9PWW9 1441 aaKnown RBP18.66■□□□□ 0.58
Col18a1-201ENSMUST00000072755 Ercc6F8VPZ5 1481 aa18.64■□□□□ 0.57
Col18a1-201ENSMUST00000072755 Kif15Q6P9L6 1387 aa18.62■□□□□ 0.57
Col18a1-201ENSMUST00000072755 Setd5Q5XJV7 1441 aa18.62■□□□□ 0.57
Col18a1-201ENSMUST00000072755 Polr3glQ8R0C0 218 aa18.62■□□□□ 0.57
Col18a1-201ENSMUST00000072755 Clstn2Q9ER65 966 aa18.62■□□□□ 0.57
Col18a1-201ENSMUST00000072755 Irx3P81067 507 aa18.55■□□□□ 0.56
Col18a1-201ENSMUST00000072755 Plppr3Q7TPB0 716 aa18.55■□□□□ 0.56
Col18a1-201ENSMUST00000072755 Ccdc18Q640L5 1455 aa18.54■□□□□ 0.56
Col18a1-201ENSMUST00000072755 Kdm5dQ62240 1548 aa18.51■□□□□ 0.55
Col18a1-201ENSMUST00000072755 Ppp4r2Q0VGB7 417 aa18.5■□□□□ 0.55
Col18a1-201ENSMUST00000072755 Calr4Q3TQS0 420 aa18.44■□□□□ 0.54
Col18a1-201ENSMUST00000072755 Upf2A2AT37 1269 aaKnown RBP18.43■□□□□ 0.54
Col18a1-201ENSMUST00000072755 Eea1Q8BL66 1411 aa18.41■□□□□ 0.54
Col18a1-201ENSMUST00000072755 Ccdc27Q3V036 639 aa18.41■□□□□ 0.54
Col18a1-201ENSMUST00000072755 Lmod3E9QA62 571 aa18.41■□□□□ 0.54
Col18a1-201ENSMUST00000072755 Taok2Q6ZQ29 1240 aa18.4■□□□□ 0.54
Col18a1-201ENSMUST00000072755 Safb2Q80YR5 991 aaKnown RBP18.39■□□□□ 0.53
Col18a1-201ENSMUST00000072755 Mrs2Q5NCE8 434 aa18.34■□□□□ 0.53
Col18a1-201ENSMUST00000072755 Arhgap27A2AB59 869 aa18.33■□□□□ 0.52
Col18a1-201ENSMUST00000072755 Rad21Q61550 635 aaKnown RBP18.32■□□□□ 0.52
Col18a1-201ENSMUST00000072755 SafbD3YXK2 937 aaKnown RBP18.31■□□□□ 0.52
Col18a1-201ENSMUST00000072755 Gtf3c3Q3TMP1 882 aa18.31■□□□□ 0.52
Col18a1-201ENSMUST00000072755 Rgl3Q3UYI5 709 aa18.3■□□□□ 0.52
Col18a1-201ENSMUST00000072755 Wdr43Q6ZQL4 677 aaKnown RBP18.29■□□□□ 0.52
Col18a1-201ENSMUST00000072755 ArxO35085 564 aa18.26■□□□□ 0.51
Col18a1-201ENSMUST00000072755 P3h3Q8CG70 732 aa18.26■□□□□ 0.51
Col18a1-201ENSMUST00000072755 Rangap1P46061 589 aaKnown RBP18.24■□□□□ 0.51
Col18a1-201ENSMUST00000072755 Pds5bQ4VA53 1446 aaKnown RBP18.23■□□□□ 0.51
Col18a1-201ENSMUST00000072755 Mtus2Q3UHD3 1353 aa18.18■□□□□ 0.5
Col18a1-201ENSMUST00000072755 IqubQ8CDK3 788 aa18.17■□□□□ 0.5
Col18a1-201ENSMUST00000072755 Mia2Q91ZV0 1396 aa18.13■□□□□ 0.49
Col18a1-201ENSMUST00000072755 Srpk2O54781 681 aaKnown RBP18.13■□□□□ 0.49
Col18a1-201ENSMUST00000072755 Mroh3A0A1D5RM54 893 aa18.11■□□□□ 0.49
Col18a1-201ENSMUST00000072755 Kdm2aP59997 1161 aa18.11■□□□□ 0.49
Col18a1-201ENSMUST00000072755 Rrp7aQ9D1C9 280 aaKnown RBP18.11■□□□□ 0.49
Col18a1-201ENSMUST00000072755 CatipB9EKE5 520 aa18.1■□□□□ 0.49
Col18a1-201ENSMUST00000072755 Grwd1Q810D6 446 aaKnown RBP18.1■□□□□ 0.49
Col18a1-201ENSMUST00000072755 Card11Q8CIS0 1159 aa18.1■□□□□ 0.49
Col18a1-201ENSMUST00000072755 Fmn1Q05860 1466 aa18.1■□□□□ 0.49
Col18a1-201ENSMUST00000072755 Fgd1P52734 960 aa18.09■□□□□ 0.49
Col18a1-201ENSMUST00000072755 Cwc22Q8C5N3 908 aaKnown RBP18.08■□□□□ 0.49
Col18a1-201ENSMUST00000072755 Rtn4Q99P72 1162 aaKnown RBP18.07■□□□□ 0.48
Col18a1-201ENSMUST00000072755 Plcd4Q8K3R3 807 aa18.07■□□□□ 0.48
Col18a1-201ENSMUST00000072755 Tnnt2P50752 301 aa18.06■□□□□ 0.48
Col18a1-201ENSMUST00000072755 Gm20521D3Z5F7 333 aa18.05■□□□□ 0.48
Col18a1-201ENSMUST00000072755 Aebp2Q9Z248 504 aaKnown RBP18.04■□□□□ 0.48
Col18a1-201ENSMUST00000072755 Sycp2Q9CUU3 1500 aa18.04■□□□□ 0.48
Col18a1-201ENSMUST00000072755 Trim26Q99PN3 545 aa18.03■□□□□ 0.48
Col18a1-201ENSMUST00000072755 Exosc9Q9JHI7 438 aaKnown RBP18.01■□□□□ 0.47
Col18a1-201ENSMUST00000072755 Ofd1Q80Z25 1017 aa18.01■□□□□ 0.47
Col18a1-201ENSMUST00000072755 Kif27Q7M6Z4 1394 aa18■□□□□ 0.47
Col18a1-201ENSMUST00000072755 Ccdc88bQ4QRL3 1481 aa17.99■□□□□ 0.47
Col18a1-201ENSMUST00000072755 Cep162Q6ZQ06 1403 aa17.99■□□□□ 0.47
Col18a1-201ENSMUST00000072755 Trim44Q9QXA7 346 aa17.98■□□□□ 0.47
Col18a1-201ENSMUST00000072755 AU015836B2RUM3 263 aa17.97■□□□□ 0.47
Col18a1-201ENSMUST00000072755 Stk24Q99KH8 431 aa17.95■□□□□ 0.46
Col18a1-201ENSMUST00000072755 BccipQ9CWI3 316 aa17.94■□□□□ 0.46
Col18a1-201ENSMUST00000072755 Znf326O88291 580 aa17.93■□□□□ 0.46
Col18a1-201ENSMUST00000072755 Crybg2B7ZCC2 1516 aa17.92■□□□□ 0.46
Col18a1-201ENSMUST00000072755 CanxP35564 591 aaKnown RBP17.92■□□□□ 0.46
Col18a1-201ENSMUST00000072755 Stag3O70576 1240 aa17.92■□□□□ 0.46
Col18a1-201ENSMUST00000072755 Mapk8ip3Q9ESN9 1337 aa17.9■□□□□ 0.46
Col18a1-201ENSMUST00000072755 Aebp1Q640N1 1128 aa17.88■□□□□ 0.45
Col18a1-201ENSMUST00000072755 Fyco1Q8VDC1 1437 aa17.87■□□□□ 0.45
Col18a1-201ENSMUST00000072755 Rpap1Q80TE0 1409 aa17.86■□□□□ 0.45
Col18a1-201ENSMUST00000072755 Irx6Q9ER75 438 aa17.86■□□□□ 0.45
Col18a1-201ENSMUST00000072755 Znf316Q6PGE4 1016 aa17.85■□□□□ 0.45
Col18a1-201ENSMUST00000072755 Hsp90ab1P11499 724 aaKnown RBP17.85■□□□□ 0.45
Col18a1-201ENSMUST00000072755 CftrP26361 1476 aa17.84■□□□□ 0.45
Col18a1-201ENSMUST00000072755 Map4P27546 1125 aaKnown RBP17.84■□□□□ 0.45
Col18a1-201ENSMUST00000072755 Trim30dE9PWL0 497 aa17.84■□□□□ 0.45
Col18a1-201ENSMUST00000072755 AknaQ80VW7 1404 aa17.84■□□□□ 0.45
Col18a1-201ENSMUST00000072755 DekQ7TNV0 380 aaKnown RBP17.83■□□□□ 0.44
Col18a1-201ENSMUST00000072755 Hspa5P20029 655 aaKnown RBP17.82■□□□□ 0.44
Col18a1-201ENSMUST00000072755 Baz1bQ9Z277 1479 aa17.82■□□□□ 0.44
Col18a1-201ENSMUST00000072755 Supt16hQ920B9 1047 aa17.82■□□□□ 0.44
Col18a1-201ENSMUST00000072755 Podxl2Q8CAE9 603 aa17.82■□□□□ 0.44
Col18a1-201ENSMUST00000072755 Cux2P70298 1426 aa17.82■□□□□ 0.44
Col18a1-201ENSMUST00000072755 Neurod2Q62414 383 aa17.81■□□□□ 0.44
Col18a1-201ENSMUST00000072755 Zfp777B9EKF4 885 aa17.81■□□□□ 0.44
Col18a1-201ENSMUST00000072755 CntlnA2AM05 1397 aa17.8■□□□□ 0.44
Col18a1-201ENSMUST00000072755 MyclP10166 368 aa17.8■□□□□ 0.44
Col18a1-201ENSMUST00000072755 Arhgap35Q91YM2 1499 aa17.8■□□□□ 0.44
Col18a1-201ENSMUST00000072755 IbspQ61711 324 aa17.8■□□□□ 0.44
Col18a1-201ENSMUST00000072755 Pkd2O35245 966 aa17.79■□□□□ 0.44
Col18a1-201ENSMUST00000072755 Iqcf3Q9D498 203 aa17.79■□□□□ 0.44
Col18a1-201ENSMUST00000072755 Ppp1r18Q8BQ30 594 aa17.79■□□□□ 0.44
Col18a1-201ENSMUST00000072755 NgefQ8CHT1 710 aa17.78■□□□□ 0.44
Col18a1-201ENSMUST00000072755 Apbb1Q9QXJ1 710 aa17.78■□□□□ 0.44
Col18a1-201ENSMUST00000072755 Vsig10D3YX43 558 aa17.78■□□□□ 0.44
Col18a1-201ENSMUST00000072755 Gtf3c5Q8R2T8 520 aa17.76■□□□□ 0.43
Col18a1-201ENSMUST00000072755 Chmp4bQ9D8B3 224 aaKnown RBP17.76■□□□□ 0.43
Col18a1-201ENSMUST00000072755 NudcO35685 332 aaKnown RBP17.75■□□□□ 0.43
Col18a1-201ENSMUST00000072755 Phldb1Q6PDH0 1371 aaKnown RBP17.75■□□□□ 0.43
Col18a1-201ENSMUST00000072755 Fhad1A6PWD2 1420 aa17.75■□□□□ 0.43
Col18a1-201ENSMUST00000072755 Dhx57Q6P5D3 1388 aaKnown RBP17.74■□□□□ 0.43
Col18a1-201ENSMUST00000072755 Smarca2Q6DIC0 1577 aa17.74■□□□□ 0.43
Col18a1-201ENSMUST00000072755 Dnttip2Q8R2M2 758 aaKnown RBP17.73■□□□□ 0.43
Col18a1-201ENSMUST00000072755 Cnga1P29974 684 aa17.73■□□□□ 0.43
Retrieved 100 of 22,080 RNA–protein pairs in 7.5 ms