RNA–Protein interactions for RNA: ENSMUST00000072755.11

Col18a1-201, Transcript of Collagen alpha-1(XVIII) chain, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Col18a1, Length 5,595 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1-201ENSMUST00000072755 Rhox8Q6VSS7 320 aa24.49■■□□□ 1.51
Col18a1-201ENSMUST00000072755 Rpgrip1Q9EPQ2 1331 aa22.57■■□□□ 1.2
Col18a1-201ENSMUST00000072755 Las1lA2BE28 776 aaKnown RBP22.2■■□□□ 1.15
Col18a1-201ENSMUST00000072755 NischQ80TM9 1593 aa21.86■■□□□ 1.09
Col18a1-201ENSMUST00000072755 Ccdc136Q3TVA9 1136 aa21.77■■□□□ 1.07
Col18a1-201ENSMUST00000072755 Esf1Q3V1V3 845 aaKnown RBP21.7■■□□□ 1.06
Col18a1-201ENSMUST00000072755 Ehmt2Q9Z148 1263 aaKnown RBP21.66■■□□□ 1.06
Col18a1-201ENSMUST00000072755 Cngb1E1AZ71 1325 aa21.65■■□□□ 1.06
Col18a1-201ENSMUST00000072755 Trim41Q5NCC3 630 aa21.43■■□□□ 1.02
Col18a1-201ENSMUST00000072755 Amer1Q7TS75 1132 aa21.32■■□□□ 1
Col18a1-201ENSMUST00000072755 Gab3Q8BSM5 595 aa21.24■□□□□ 0.99
Col18a1-201ENSMUST00000072755 Zeb1Q64318 1117 aa21.22■□□□□ 0.99
Col18a1-201ENSMUST00000072755 Npm2Q80W85 207 aa21.18■□□□□ 0.98
Col18a1-201ENSMUST00000072755 CenpbP27790 599 aa21.18■□□□□ 0.98
Col18a1-201ENSMUST00000072755 Myt1Q8CFC2 1127 aa21.15■□□□□ 0.98
Col18a1-201ENSMUST00000072755 DiexfQ8BTT6 772 aaKnown RBP21.11■□□□□ 0.97
Col18a1-201ENSMUST00000072755 Ube2uB1AUC4 352 aa21.11■□□□□ 0.97
Col18a1-201ENSMUST00000072755 Wdr66E9Q743 1299 aa21.11■□□□□ 0.97
Col18a1-201ENSMUST00000072755 Pelp1Q9DBD5 1123 aaKnown RBP21.02■□□□□ 0.96
Col18a1-201ENSMUST00000072755 Myt1lP97500 1187 aa20.94■□□□□ 0.94
Col18a1-201ENSMUST00000072755 Pcgf6Q99NA9 353 aa20.77■□□□□ 0.91
Col18a1-201ENSMUST00000072755 Acin1Q9JIX8 1338 aaKnown RBP20.74■□□□□ 0.91
Col18a1-201ENSMUST00000072755 Ccdc180J3QNE4 1664 aa20.61■□□□□ 0.89
Col18a1-201ENSMUST00000072755 Rtl1Q7M732 1744 aa20.49■□□□□ 0.87
Col18a1-201ENSMUST00000072755 UbtfP25976 765 aaKnown RBP20.44■□□□□ 0.86
Col18a1-201ENSMUST00000072755 NefmP08553 848 aa20.43■□□□□ 0.86
Col18a1-201ENSMUST00000072755 Ttbk1Q6PCN3 1308 aa20.41■□□□□ 0.86
Col18a1-201ENSMUST00000072755 Abcc9P70170 1546 aa20.39■□□□□ 0.85
Col18a1-201ENSMUST00000072755 HrcG5E8J6 738 aa20.39■□□□□ 0.85
Col18a1-201ENSMUST00000072755 Zcchc6Q5BLK4 1491 aaKnown RBP20.35■□□□□ 0.85
Col18a1-201ENSMUST00000072755 Il27Q8K3I6 234 aa20.33■□□□□ 0.85
Col18a1-201ENSMUST00000072755 Gm35339A0A140LHH9 1649 aa20.14■□□□□ 0.81
Col18a1-201ENSMUST00000072755 Stra8P70278 393 aa20.12■□□□□ 0.81
Col18a1-201ENSMUST00000072755 Supt5hO55201 1082 aaKnown RBP20.07■□□□□ 0.8
Col18a1-201ENSMUST00000072755 Cdk11bP24788 784 aaKnown RBP19.94■□□□□ 0.78
Col18a1-201ENSMUST00000072755 Ap3b1Q9Z1T1 1105 aa19.94■□□□□ 0.78
Col18a1-201ENSMUST00000072755 Neurod1Q60867 357 aa19.92■□□□□ 0.78
Col18a1-201ENSMUST00000072755 Slc24a1Q91WD8 1130 aa19.92■□□□□ 0.78
Col18a1-201ENSMUST00000072755 Abcc8B2RUS7 1588 aa19.92■□□□□ 0.78
Col18a1-201ENSMUST00000072755 Fam50aQ9WV03 339 aaKnown RBP19.88■□□□□ 0.77
Col18a1-201ENSMUST00000072755 4933416C03RikQ3V063 378 aa19.84■□□□□ 0.77
Col18a1-201ENSMUST00000072755 Bcl11aQ9QYE3 773 aa19.75■□□□□ 0.75
Col18a1-201ENSMUST00000072755 4930567H17RikQ3V0K5 233 aa19.72■□□□□ 0.75
Col18a1-201ENSMUST00000072755 Csrnp3P59055 597 aa19.7■□□□□ 0.74
Col18a1-201ENSMUST00000072755 Anp32bQ9EST5 272 aaKnown RBP19.69■□□□□ 0.74
Col18a1-201ENSMUST00000072755 NclP09405 707 aaKnown RBP19.69■□□□□ 0.74
Col18a1-201ENSMUST00000072755 Nop58Q6DFW4 536 aaKnown RBP19.67■□□□□ 0.74
Col18a1-201ENSMUST00000072755 Rtl5Q5DTT4 599 aa19.65■□□□□ 0.74
Col18a1-201ENSMUST00000072755 NrdcQ8BHG1 1161 aa19.64■□□□□ 0.73
Col18a1-201ENSMUST00000072755 Gm38655A0A286YDK6 273 aa19.63■□□□□ 0.73
Col18a1-201ENSMUST00000072755 Npm1Q61937 292 aaKnown RBP19.63■□□□□ 0.73
Col18a1-201ENSMUST00000072755 Os9Q8K2C7 672 aa19.6■□□□□ 0.73
Col18a1-201ENSMUST00000072755 TonslQ6NZL6 1363 aa19.54■□□□□ 0.72
Col18a1-201ENSMUST00000072755 Tnnt3Q9QZ47 272 aa19.51■□□□□ 0.71
Col18a1-201ENSMUST00000072755 1700123L14RikQ3V2K7 440 aa19.48■□□□□ 0.71
Col18a1-201ENSMUST00000072755 Aplp2Q06335 707 aa19.46■□□□□ 0.71
Col18a1-201ENSMUST00000072755 Brd4Q9ESU6 1400 aaKnown RBP19.43■□□□□ 0.7
Col18a1-201ENSMUST00000072755 Mier1Q5UAK0 511 aa19.43■□□□□ 0.7
Col18a1-201ENSMUST00000072755 NeflP08551 543 aa19.4■□□□□ 0.7
Col18a1-201ENSMUST00000072755 Anks4bQ8K3X6 423 aa19.39■□□□□ 0.69
Col18a1-201ENSMUST00000072755 Lmod2Q3UHZ5 550 aa19.38■□□□□ 0.69
Col18a1-201ENSMUST00000072755 Ppargc1bQ8VHJ7 1014 aa19.34■□□□□ 0.69
Col18a1-201ENSMUST00000072755 Eif5bQ05D44 1216 aaKnown RBP19.33■□□□□ 0.68
Col18a1-201ENSMUST00000072755 Plekhg3Q4VAC9 1341 aa19.33■□□□□ 0.68
Col18a1-201ENSMUST00000072755 Rb1cc1Q9ESK9 1588 aa19.29■□□□□ 0.68
Col18a1-201ENSMUST00000072755 Anp32aO35381 247 aa19.24■□□□□ 0.67
Col18a1-201ENSMUST00000072755 Zbtb7cQ8VCZ7 619 aa19.24■□□□□ 0.67
Col18a1-201ENSMUST00000072755 Hnrnpul2Q00PI9 745 aaKnown RBP19.19■□□□□ 0.66
Col18a1-201ENSMUST00000072755 Cep164Q5DU05 1446 aa19.14■□□□□ 0.65
Col18a1-201ENSMUST00000072755 Ifnlr1Q8CGK5 535 aa19.11■□□□□ 0.65
Col18a1-201ENSMUST00000072755 Gm13697A2AK42 830 aa19.11■□□□□ 0.65
Col18a1-201ENSMUST00000072755 Clip1Q922J3 1391 aa19.1■□□□□ 0.65
Col18a1-201ENSMUST00000072755 DaxxO35613 739 aa19.1■□□□□ 0.65
Col18a1-201ENSMUST00000072755 Dcaf1Q80TR8 1506 aa19.09■□□□□ 0.65
Col18a1-201ENSMUST00000072755 ClspnQ80YR7 1315 aa19.07■□□□□ 0.64
Col18a1-201ENSMUST00000072755 Chic1Q8CBW7 227 aa19.04■□□□□ 0.64
Col18a1-201ENSMUST00000072755 Ubl4bQ9CQ84 188 aa19.03■□□□□ 0.64
Col18a1-201ENSMUST00000072755 NacadQ5SWP3 1504 aa19.01■□□□□ 0.63
Col18a1-201ENSMUST00000072755 Fam71e1A1L3C1 212 aa19.01■□□□□ 0.63
Col18a1-201ENSMUST00000072755 Hdac5Q9Z2V6 1113 aa19■□□□□ 0.63
Col18a1-201ENSMUST00000072755 Erich6D3Z6S9 713 aa18.99■□□□□ 0.63
Col18a1-201ENSMUST00000072755 PrkcshO08795 521 aa18.96■□□□□ 0.63
Col18a1-201ENSMUST00000072755 Ythdc1E9Q5K9 736 aaKnown RBP18.95■□□□□ 0.62
Col18a1-201ENSMUST00000072755 Fkbp15Q6P9Q6 1216 aaKnown RBP18.95■□□□□ 0.62
Col18a1-201ENSMUST00000072755 Sall2Q9QX96 1004 aa18.93■□□□□ 0.62
Col18a1-201ENSMUST00000072755 Mapk8ip2Q9ERE9 830 aa18.92■□□□□ 0.62
Col18a1-201ENSMUST00000072755 Atp1b4Q99ME6 356 aa18.91■□□□□ 0.62
Col18a1-201ENSMUST00000072755 Ccer2J3QPU5 274 aa18.89■□□□□ 0.61
Col18a1-201ENSMUST00000072755 Zbtb4Q5F293 982 aa18.89■□□□□ 0.61
Col18a1-201ENSMUST00000072755 Nlrp6Q91WS2 869 aa18.87■□□□□ 0.61
Col18a1-201ENSMUST00000072755 Eid3Q3V124 375 aa18.86■□□□□ 0.61
Col18a1-201ENSMUST00000072755 Baz1aO88379 1555 aa18.81■□□□□ 0.6
Col18a1-201ENSMUST00000072755 Gm13695A2AK44 830 aa18.78■□□□□ 0.6
Col18a1-201ENSMUST00000072755 Ccdc9Q8VC31 543 aaKnown RBP18.73■□□□□ 0.59
Col18a1-201ENSMUST00000072755 Pknox2Q8BG99 474 aa18.71■□□□□ 0.59
Col18a1-201ENSMUST00000072755 Prdm10Q3UTQ7 1184 aa18.7■□□□□ 0.58
Col18a1-201ENSMUST00000072755 BlmO88700 1416 aa18.7■□□□□ 0.58
Col18a1-201ENSMUST00000072755 Hsp90aa1P07901 733 aaKnown RBP18.68■□□□□ 0.58
Col18a1-201ENSMUST00000072755 Chic2Q9D9G3 165 aa18.66■□□□□ 0.58
Col18a1-201ENSMUST00000072755 Golga3P55937 1487 aa18.66■□□□□ 0.58
Retrieved 100 of 22,080 RNA–protein pairs in 100.1 ms