RNA–Protein interactions for RNA: ENSMUST00000070617.7

Scn11a-201, Transcript of Sodium channel protein type 11 subunit alpha, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scn11a, Length 5,837 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn11a-201ENSMUST00000070617 Trim44Q9QXA7 346 aa10.48□□□□□ -0.73
Scn11a-201ENSMUST00000070617 Rad21Q61550 635 aaKnown RBP10.47□□□□□ -0.73
Scn11a-201ENSMUST00000070617 Rangap1P46061 589 aaKnown RBP10.47□□□□□ -0.73
Scn11a-201ENSMUST00000070617 Mrs2Q5NCE8 434 aa10.47□□□□□ -0.73
Scn11a-201ENSMUST00000070617 Atp1b4Q99ME6 356 aa10.45□□□□□ -0.74
Scn11a-201ENSMUST00000070617 CanxP35564 591 aaKnown RBP10.45□□□□□ -0.74
Scn11a-201ENSMUST00000070617 Gm13697A2AK42 830 aa10.44□□□□□ -0.74
Scn11a-201ENSMUST00000070617 Bcl11aQ9QYE3 773 aa10.4□□□□□ -0.74
Scn11a-201ENSMUST00000070617 Smarca2Q6DIC0 1577 aa10.4□□□□□ -0.75
Scn11a-201ENSMUST00000070617 Ercc6F8VPZ5 1481 aa10.39□□□□□ -0.75
Scn11a-201ENSMUST00000070617 Ccer2J3QPU5 274 aa10.38□□□□□ -0.75
Scn11a-201ENSMUST00000070617 Ccdc27Q3V036 639 aa10.38□□□□□ -0.75
Scn11a-201ENSMUST00000070617 Pds5bQ4VA53 1446 aaKnown RBP10.37□□□□□ -0.75
Scn11a-201ENSMUST00000070617 Rsf1E9PWW9 1441 aaKnown RBP10.37□□□□□ -0.75
Scn11a-201ENSMUST00000070617 Trim30dE9PWL0 497 aa10.37□□□□□ -0.75
Scn11a-201ENSMUST00000070617 Hsp90ab1P11499 724 aaKnown RBP10.37□□□□□ -0.75
Scn11a-201ENSMUST00000070617 Clip1Q922J3 1391 aa10.36□□□□□ -0.75
Scn11a-201ENSMUST00000070617 Ubl4bQ9CQ84 188 aa10.35□□□□□ -0.75
Scn11a-201ENSMUST00000070617 Ifnlr1Q8CGK5 535 aa10.34□□□□□ -0.75
Scn11a-201ENSMUST00000070617 Hdac5Q9Z2V6 1113 aa10.33□□□□□ -0.76
Scn11a-201ENSMUST00000070617 PtmaP26350 111 aa10.31□□□□□ -0.76
Scn11a-201ENSMUST00000070617 Arid4bA2CG63 1314 aaKnown RBP10.31□□□□□ -0.76
Scn11a-201ENSMUST00000070617 P3h3Q8CG70 732 aa10.31□□□□□ -0.76
Scn11a-201ENSMUST00000070617 Gm13695A2AK44 830 aa10.3□□□□□ -0.76
Scn11a-201ENSMUST00000070617 Irx3P81067 507 aa10.29□□□□□ -0.76
Scn11a-201ENSMUST00000070617 Plcb2A3KGF7 1181 aa10.29□□□□□ -0.76
Scn11a-201ENSMUST00000070617 Htatsf1Q8BGC0 757 aa10.29□□□□□ -0.76
Scn11a-201ENSMUST00000070617 Aebp2Q9Z248 504 aaKnown RBP10.29□□□□□ -0.76
Scn11a-201ENSMUST00000070617 Kif15Q6P9L6 1387 aa10.28□□□□□ -0.76
Scn11a-201ENSMUST00000070617 Fgd1P52734 960 aa10.27□□□□□ -0.77
Scn11a-201ENSMUST00000070617 Trim26Q99PN3 545 aa10.27□□□□□ -0.77
Scn11a-201ENSMUST00000070617 Ccdc18Q640L5 1455 aa10.27□□□□□ -0.77
Scn11a-201ENSMUST00000070617 CftrP26361 1476 aa10.26□□□□□ -0.77
Scn11a-201ENSMUST00000070617 Fmn1Q05860 1466 aa10.26□□□□□ -0.77
Scn11a-201ENSMUST00000070617 Ofd1Q80Z25 1017 aa10.26□□□□□ -0.77
Scn11a-201ENSMUST00000070617 Chic2Q9D9G3 165 aa10.25□□□□□ -0.77
Scn11a-201ENSMUST00000070617 Fkbp15Q6P9Q6 1216 aaKnown RBP10.25□□□□□ -0.77
Scn11a-201ENSMUST00000070617 Ppm1gQ61074 542 aa10.23□□□□□ -0.77
Scn11a-201ENSMUST00000070617 Spryd3E9Q9B3 442 aa10.21□□□□□ -0.77
Scn11a-201ENSMUST00000070617 SafbD3YXK2 937 aaKnown RBP10.21□□□□□ -0.77
Scn11a-201ENSMUST00000070617 Cecr2E9Q2Z1 1453 aa10.21□□□□□ -0.78
Scn11a-201ENSMUST00000070617 Smarca4Q3TKT4 1613 aaKnown RBP10.2□□□□□ -0.78
Scn11a-201ENSMUST00000070617 Atad2bE9Q166 1460 aaKnown RBP10.2□□□□□ -0.78
Scn11a-201ENSMUST00000070617 AU015836B2RUM3 263 aa10.19□□□□□ -0.78
Scn11a-201ENSMUST00000070617 Apbb1Q9QXJ1 710 aa10.18□□□□□ -0.78
Scn11a-201ENSMUST00000070617 Synj1Q8CHC4 1574 aa10.18□□□□□ -0.78
Scn11a-201ENSMUST00000070617 Tnnt2P50752 301 aa10.17□□□□□ -0.78
Scn11a-201ENSMUST00000070617 Setd5Q5XJV7 1441 aa10.17□□□□□ -0.78
Scn11a-201ENSMUST00000070617 Ccdc88bQ4QRL3 1481 aa10.17□□□□□ -0.78
Scn11a-201ENSMUST00000070617 Cttnbp2B9EJA2 1648 aa10.17□□□□□ -0.78
Scn11a-201ENSMUST00000070617 Dbr1Q923B1 550 aa10.16□□□□□ -0.78
Scn11a-201ENSMUST00000070617 Eea1Q8BL66 1411 aa10.15□□□□□ -0.78
Scn11a-201ENSMUST00000070617 Znf316Q6PGE4 1016 aa10.15□□□□□ -0.78
Scn11a-201ENSMUST00000070617 Rgl3Q3UYI5 709 aa10.13□□□□□ -0.79
Scn11a-201ENSMUST00000070617 Casc1Q6TDU8 730 aa10.13□□□□□ -0.79
Scn11a-201ENSMUST00000070617 BlmO88700 1416 aa10.13□□□□□ -0.79
Scn11a-201ENSMUST00000070617 Adam1bQ8R534 806 aa10.13□□□□□ -0.79
Scn11a-201ENSMUST00000070617 Dnttip2Q8R2M2 758 aaKnown RBP10.12□□□□□ -0.79
Scn11a-201ENSMUST00000070617 B4galnt3Q6L8S8 986 aa10.12□□□□□ -0.79
Scn11a-201ENSMUST00000070617 Slc4a3P16283 1227 aa10.11□□□□□ -0.79
Scn11a-201ENSMUST00000070617 Clstn2Q9ER65 966 aa10.11□□□□□ -0.79
Scn11a-201ENSMUST00000070617 Neurod2Q62414 383 aa10.09□□□□□ -0.79
Scn11a-201ENSMUST00000070617 Cep162Q6ZQ06 1403 aa10.09□□□□□ -0.79
Scn11a-201ENSMUST00000070617 Erich6bQ9D4S6 220 aa10.09□□□□□ -0.79
Scn11a-201ENSMUST00000070617 Irx6Q9ER75 438 aa10.08□□□□□ -0.8
Scn11a-201ENSMUST00000070617 Armcx1Q9CX83 456 aa10.07□□□□□ -0.8
Scn11a-201ENSMUST00000070617 PnnO35691 725 aaKnown RBP10.06□□□□□ -0.8
Scn11a-201ENSMUST00000070617 Map7O88735 730 aa10.06□□□□□ -0.8
Scn11a-201ENSMUST00000070617 Tcerg1Q8CGF7 1100 aaKnown RBP10.06□□□□□ -0.8
Scn11a-201ENSMUST00000070617 Taok2Q6ZQ29 1240 aa10.06□□□□□ -0.8
Scn11a-201ENSMUST00000070617 MsnP26041 577 aaKnown RBP10.05□□□□□ -0.8
Scn11a-201ENSMUST00000070617 Phldb1Q6PDH0 1371 aaKnown RBP10.05□□□□□ -0.8
Scn11a-201ENSMUST00000070617 Iqgap2Q3UQ44 1575 aa10.04□□□□□ -0.8
Scn11a-201ENSMUST00000070617 Plppr3Q7TPB0 716 aa10.04□□□□□ -0.8
Scn11a-201ENSMUST00000070617 Supt16hQ920B9 1047 aa10.04□□□□□ -0.8
Scn11a-201ENSMUST00000070617 Grwd1Q810D6 446 aaKnown RBP10.03□□□□□ -0.8
Scn11a-201ENSMUST00000070617 Znf326O88291 580 aa10.03□□□□□ -0.8
Scn11a-201ENSMUST00000070617 Dnai1Q8C0M8 701 aa10.02□□□□□ -0.8
Scn11a-201ENSMUST00000070617 Gm6268A2A3U9 297 aa10.01□□□□□ -0.81
Scn11a-201ENSMUST00000070617 Card11Q8CIS0 1159 aa10.01□□□□□ -0.81
Scn11a-201ENSMUST00000070617 Chmp5Q9D7S9 219 aa10.01□□□□□ -0.81
Scn11a-201ENSMUST00000070617 Kdm2aP59997 1161 aa10□□□□□ -0.81
Scn11a-201ENSMUST00000070617 Pes1Q9EQ61 584 aaKnown RBP10□□□□□ -0.81
Scn11a-201ENSMUST00000070617 Cwc22Q8C5N3 908 aaKnown RBP10□□□□□ -0.81
Scn11a-201ENSMUST00000070617 Mapk8ip3Q9ESN9 1337 aa10□□□□□ -0.81
Scn11a-201ENSMUST00000070617 Chmp4bQ9D8B3 224 aaKnown RBP9.99□□□□□ -0.81
Scn11a-201ENSMUST00000070617 Wwc2Q6NXJ0 1187 aa9.99□□□□□ -0.81
Scn11a-201ENSMUST00000070617 Calcoco2A2A6M5 331 aa9.99□□□□□ -0.81
Scn11a-201ENSMUST00000070617 Hsp90b1P08113 802 aaKnown RBP9.99□□□□□ -0.81
Scn11a-201ENSMUST00000070617 KnstrnQ9D9Z1 312 aaKnown RBP9.98□□□□□ -0.81
Scn11a-201ENSMUST00000070617 Ipo9Q91YE6 1041 aa9.98□□□□□ -0.81
Scn11a-201ENSMUST00000070617 Rwdd1Q9CQK7 243 aa9.97□□□□□ -0.81
Scn11a-201ENSMUST00000070617 Mbd3Q9Z2D8 285 aaKnown RBP9.97□□□□□ -0.81
Scn11a-201ENSMUST00000070617 Rrp12Q6P5B0 1295 aaKnown RBP9.97□□□□□ -0.81
Scn11a-201ENSMUST00000070617 Mak16Q8BGS0 296 aaKnown RBP9.97□□□□□ -0.81
Scn11a-201ENSMUST00000070617 Cux2P70298 1426 aa9.97□□□□□ -0.81
Scn11a-201ENSMUST00000070617 Rapgef2Q8CHG7 1496 aa9.97□□□□□ -0.81
Scn11a-201ENSMUST00000070617 Gm973E9Q295 1059 aa9.95□□□□□ -0.82
Scn11a-201ENSMUST00000070617 Gtf3c3Q3TMP1 882 aa9.95□□□□□ -0.82
Scn11a-201ENSMUST00000070617 Pcmtd1P59913 357 aa9.95□□□□□ -0.82
Retrieved 100 of 22,080 RNA–protein pairs in 42.9 ms