RNA–Protein interactions for RNA: ENSMUST00000070617.7

Scn11a-201, Transcript of Sodium channel protein type 11 subunit alpha, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scn11a, Length 5,837 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn11a-201ENSMUST00000070617 Rhox8Q6VSS7 320 aa13.55□□□□□ -0.24
Scn11a-201ENSMUST00000070617 Rpgrip1Q9EPQ2 1331 aa12.86□□□□□ -0.35
Scn11a-201ENSMUST00000070617 Las1lA2BE28 776 aaKnown RBP12.61□□□□□ -0.39
Scn11a-201ENSMUST00000070617 Cngb1E1AZ71 1325 aa12.59□□□□□ -0.39
Scn11a-201ENSMUST00000070617 NischQ80TM9 1593 aa12.57□□□□□ -0.4
Scn11a-201ENSMUST00000070617 Ehmt2Q9Z148 1263 aaKnown RBP12.55□□□□□ -0.4
Scn11a-201ENSMUST00000070617 Pelp1Q9DBD5 1123 aaKnown RBP12.31□□□□□ -0.44
Scn11a-201ENSMUST00000070617 Wdr66E9Q743 1299 aa12.29□□□□□ -0.44
Scn11a-201ENSMUST00000070617 Zeb1Q64318 1117 aa12.16□□□□□ -0.46
Scn11a-201ENSMUST00000070617 Amer1Q7TS75 1132 aa12.05□□□□□ -0.48
Scn11a-201ENSMUST00000070617 CenpbP27790 599 aa12□□□□□ -0.49
Scn11a-201ENSMUST00000070617 Abcc9P70170 1546 aa11.95□□□□□ -0.5
Scn11a-201ENSMUST00000070617 Ube2uB1AUC4 352 aa11.94□□□□□ -0.5
Scn11a-201ENSMUST00000070617 Ccdc136Q3TVA9 1136 aa11.92□□□□□ -0.5
Scn11a-201ENSMUST00000070617 Gab3Q8BSM5 595 aa11.85□□□□□ -0.51
Scn11a-201ENSMUST00000070617 Esf1Q3V1V3 845 aaKnown RBP11.78□□□□□ -0.52
Scn11a-201ENSMUST00000070617 Acin1Q9JIX8 1338 aaKnown RBP11.76□□□□□ -0.53
Scn11a-201ENSMUST00000070617 Abcc8B2RUS7 1588 aa11.7□□□□□ -0.54
Scn11a-201ENSMUST00000070617 Gm35339A0A140LHH9 1649 aa11.69□□□□□ -0.54
Scn11a-201ENSMUST00000070617 Trim41Q5NCC3 630 aa11.68□□□□□ -0.54
Scn11a-201ENSMUST00000070617 Npm2Q80W85 207 aa11.65□□□□□ -0.54
Scn11a-201ENSMUST00000070617 NefmP08553 848 aa11.64□□□□□ -0.55
Scn11a-201ENSMUST00000070617 Stra8P70278 393 aa11.63□□□□□ -0.55
Scn11a-201ENSMUST00000070617 Myt1lP97500 1187 aa11.63□□□□□ -0.55
Scn11a-201ENSMUST00000070617 Ttbk1Q6PCN3 1308 aa11.62□□□□□ -0.55
Scn11a-201ENSMUST00000070617 Myt1Q8CFC2 1127 aa11.61□□□□□ -0.55
Scn11a-201ENSMUST00000070617 Slc24a1Q91WD8 1130 aa11.61□□□□□ -0.55
Scn11a-201ENSMUST00000070617 Rtl1Q7M732 1744 aa11.61□□□□□ -0.55
Scn11a-201ENSMUST00000070617 4930567H17RikQ3V0K5 233 aa11.58□□□□□ -0.56
Scn11a-201ENSMUST00000070617 Cdk11bP24788 784 aaKnown RBP11.54□□□□□ -0.56
Scn11a-201ENSMUST00000070617 Pcgf6Q99NA9 353 aa11.53□□□□□ -0.56
Scn11a-201ENSMUST00000070617 UbtfP25976 765 aaKnown RBP11.52□□□□□ -0.56
Scn11a-201ENSMUST00000070617 Ccdc180J3QNE4 1664 aa11.51□□□□□ -0.57
Scn11a-201ENSMUST00000070617 4933416C03RikQ3V063 378 aa11.5□□□□□ -0.57
Scn11a-201ENSMUST00000070617 Nop58Q6DFW4 536 aaKnown RBP11.38□□□□□ -0.59
Scn11a-201ENSMUST00000070617 Tnnt3Q9QZ47 272 aa11.36□□□□□ -0.59
Scn11a-201ENSMUST00000070617 NrdcQ8BHG1 1161 aa11.28□□□□□ -0.6
Scn11a-201ENSMUST00000070617 HrcG5E8J6 738 aa11.27□□□□□ -0.6
Scn11a-201ENSMUST00000070617 Ppargc1bQ8VHJ7 1014 aa11.27□□□□□ -0.61
Scn11a-201ENSMUST00000070617 Supt5hO55201 1082 aaKnown RBP11.26□□□□□ -0.61
Scn11a-201ENSMUST00000070617 Eif5bQ05D44 1216 aaKnown RBP11.25□□□□□ -0.61
Scn11a-201ENSMUST00000070617 DiexfQ8BTT6 772 aaKnown RBP11.25□□□□□ -0.61
Scn11a-201ENSMUST00000070617 NeflP08551 543 aa11.24□□□□□ -0.61
Scn11a-201ENSMUST00000070617 Zcchc6Q5BLK4 1491 aaKnown RBP11.2□□□□□ -0.62
Scn11a-201ENSMUST00000070617 Rtl5Q5DTT4 599 aa11.19□□□□□ -0.62
Scn11a-201ENSMUST00000070617 Anp32bQ9EST5 272 aaKnown RBP11.19□□□□□ -0.62
Scn11a-201ENSMUST00000070617 NclP09405 707 aaKnown RBP11.17□□□□□ -0.62
Scn11a-201ENSMUST00000070617 Neurod1Q60867 357 aa11.14□□□□□ -0.63
Scn11a-201ENSMUST00000070617 Fam50aQ9WV03 339 aaKnown RBP11.1□□□□□ -0.63
Scn11a-201ENSMUST00000070617 TonslQ6NZL6 1363 aa11.04□□□□□ -0.64
Scn11a-201ENSMUST00000070617 DaxxO35613 739 aa11.04□□□□□ -0.64
Scn11a-201ENSMUST00000070617 Rb1cc1Q9ESK9 1588 aa11.03□□□□□ -0.64
Scn11a-201ENSMUST00000070617 Anp32aO35381 247 aa11.01□□□□□ -0.65
Scn11a-201ENSMUST00000070617 Il27Q8K3I6 234 aa10.99□□□□□ -0.65
Scn11a-201ENSMUST00000070617 NacadQ5SWP3 1504 aa10.99□□□□□ -0.65
Scn11a-201ENSMUST00000070617 Dcaf1Q80TR8 1506 aa10.98□□□□□ -0.65
Scn11a-201ENSMUST00000070617 Ap3b1Q9Z1T1 1105 aa10.98□□□□□ -0.65
Scn11a-201ENSMUST00000070617 Os9Q8K2C7 672 aa10.95□□□□□ -0.66
Scn11a-201ENSMUST00000070617 Mier1Q5UAK0 511 aa10.93□□□□□ -0.66
Scn11a-201ENSMUST00000070617 Gm38655A0A286YDK6 273 aa10.92□□□□□ -0.66
Scn11a-201ENSMUST00000070617 ClspnQ80YR7 1315 aa10.89□□□□□ -0.67
Scn11a-201ENSMUST00000070617 Brd4Q9ESU6 1400 aaKnown RBP10.88□□□□□ -0.67
Scn11a-201ENSMUST00000070617 Baz1aO88379 1555 aa10.87□□□□□ -0.67
Scn11a-201ENSMUST00000070617 Csrnp3P59055 597 aa10.85□□□□□ -0.67
Scn11a-201ENSMUST00000070617 Anks4bQ8K3X6 423 aa10.81□□□□□ -0.68
Scn11a-201ENSMUST00000070617 Aplp2Q06335 707 aa10.79□□□□□ -0.68
Scn11a-201ENSMUST00000070617 Kdm5dQ62240 1548 aa10.77□□□□□ -0.69
Scn11a-201ENSMUST00000070617 Mapk8ip2Q9ERE9 830 aa10.77□□□□□ -0.69
Scn11a-201ENSMUST00000070617 ArxO35085 564 aa10.76□□□□□ -0.69
Scn11a-201ENSMUST00000070617 Sall2Q9QX96 1004 aa10.75□□□□□ -0.69
Scn11a-201ENSMUST00000070617 Cep164Q5DU05 1446 aa10.7□□□□□ -0.7
Scn11a-201ENSMUST00000070617 Ppp4r2Q0VGB7 417 aa10.68□□□□□ -0.7
Scn11a-201ENSMUST00000070617 Zbtb7cQ8VCZ7 619 aa10.68□□□□□ -0.7
Scn11a-201ENSMUST00000070617 Plekhg3Q4VAC9 1341 aa10.66□□□□□ -0.7
Scn11a-201ENSMUST00000070617 Zbtb4Q5F293 982 aa10.66□□□□□ -0.7
Scn11a-201ENSMUST00000070617 CatipB9EKE5 520 aa10.66□□□□□ -0.7
Scn11a-201ENSMUST00000070617 Lmod2Q3UHZ5 550 aa10.66□□□□□ -0.7
Scn11a-201ENSMUST00000070617 Calr4Q3TQS0 420 aa10.66□□□□□ -0.7
Scn11a-201ENSMUST00000070617 Polr3glQ8R0C0 218 aa10.65□□□□□ -0.7
Scn11a-201ENSMUST00000070617 Eid3Q3V124 375 aa10.64□□□□□ -0.71
Scn11a-201ENSMUST00000070617 Ythdc1E9Q5K9 736 aaKnown RBP10.63□□□□□ -0.71
Scn11a-201ENSMUST00000070617 Lmod3E9QA62 571 aa10.62□□□□□ -0.71
Scn11a-201ENSMUST00000070617 Nlrp6Q91WS2 869 aa10.62□□□□□ -0.71
Scn11a-201ENSMUST00000070617 Crybg2B7ZCC2 1516 aa10.62□□□□□ -0.71
Scn11a-201ENSMUST00000070617 Upf2A2AT37 1269 aaKnown RBP10.6□□□□□ -0.71
Scn11a-201ENSMUST00000070617 Chic1Q8CBW7 227 aa10.6□□□□□ -0.71
Scn11a-201ENSMUST00000070617 Hnrnpul2Q00PI9 745 aaKnown RBP10.6□□□□□ -0.71
Scn11a-201ENSMUST00000070617 Ccdc9Q8VC31 543 aaKnown RBP10.59□□□□□ -0.71
Scn11a-201ENSMUST00000070617 Hsp90aa1P07901 733 aaKnown RBP10.58□□□□□ -0.72
Scn11a-201ENSMUST00000070617 Prdm10Q3UTQ7 1184 aa10.58□□□□□ -0.72
Scn11a-201ENSMUST00000070617 Wdr43Q6ZQL4 677 aaKnown RBP10.58□□□□□ -0.72
Scn11a-201ENSMUST00000070617 Npm1Q61937 292 aaKnown RBP10.55□□□□□ -0.72
Scn11a-201ENSMUST00000070617 ScribQ80U72 1612 aa10.54□□□□□ -0.72
Scn11a-201ENSMUST00000070617 Sycp2Q9CUU3 1500 aa10.54□□□□□ -0.72
Scn11a-201ENSMUST00000070617 1700123L14RikQ3V2K7 440 aa10.54□□□□□ -0.72
Scn11a-201ENSMUST00000070617 Golga3P55937 1487 aa10.53□□□□□ -0.72
Scn11a-201ENSMUST00000070617 DekQ7TNV0 380 aaKnown RBP10.49□□□□□ -0.73
Scn11a-201ENSMUST00000070617 Fam71e1A1L3C1 212 aa10.48□□□□□ -0.73
Scn11a-201ENSMUST00000070617 Erich6D3Z6S9 713 aa10.48□□□□□ -0.73
Scn11a-201ENSMUST00000070617 Vsig10D3YX43 558 aa10.48□□□□□ -0.73
Retrieved 100 of 22,080 RNA–protein pairs in 135.2 ms