RNA–Protein interactions for RNA: ENSMUST00000070478.3

Sdc3-201, Transcript of Syndecan-3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sdc3, Length 4,973 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc3-201ENSMUST00000070478 Rgl3Q3UYI5 709 aa23.95■■□□□ 1.42
Sdc3-201ENSMUST00000070478 Rad21Q61550 635 aaKnown RBP23.91■■□□□ 1.42
Sdc3-201ENSMUST00000070478 Anks4bQ8K3X6 423 aa23.89■■□□□ 1.42
Sdc3-201ENSMUST00000070478 P3h3Q8CG70 732 aa23.86■■□□□ 1.41
Sdc3-201ENSMUST00000070478 Rangap1P46061 589 aaKnown RBP23.86■■□□□ 1.41
Sdc3-201ENSMUST00000070478 Gm38655A0A286YDK6 273 aa23.85■■□□□ 1.41
Sdc3-201ENSMUST00000070478 Upf2A2AT37 1269 aaKnown RBP23.82■■□□□ 1.4
Sdc3-201ENSMUST00000070478 DaxxO35613 739 aa23.8■■□□□ 1.4
Sdc3-201ENSMUST00000070478 Calr4Q3TQS0 420 aa23.79■■□□□ 1.4
Sdc3-201ENSMUST00000070478 Pds5bQ4VA53 1446 aaKnown RBP23.79■■□□□ 1.4
Sdc3-201ENSMUST00000070478 ArxO35085 564 aa23.77■■□□□ 1.4
Sdc3-201ENSMUST00000070478 Grwd1Q810D6 446 aaKnown RBP23.73■■□□□ 1.39
Sdc3-201ENSMUST00000070478 Kdm2aP59997 1161 aa23.72■■□□□ 1.39
Sdc3-201ENSMUST00000070478 Rrp7aQ9D1C9 280 aaKnown RBP23.7■■□□□ 1.39
Sdc3-201ENSMUST00000070478 DiexfQ8BTT6 772 aaKnown RBP23.69■■□□□ 1.38
Sdc3-201ENSMUST00000070478 Mroh3A0A1D5RM54 893 aa23.68■■□□□ 1.38
Sdc3-201ENSMUST00000070478 Ppp4r2Q0VGB7 417 aa23.68■■□□□ 1.38
Sdc3-201ENSMUST00000070478 Aebp2Q9Z248 504 aaKnown RBP23.68■■□□□ 1.38
Sdc3-201ENSMUST00000070478 Mtus2Q3UHD3 1353 aa23.67■■□□□ 1.38
Sdc3-201ENSMUST00000070478 IqubQ8CDK3 788 aa23.62■■□□□ 1.37
Sdc3-201ENSMUST00000070478 Srpk2O54781 681 aaKnown RBP23.61■■□□□ 1.37
Sdc3-201ENSMUST00000070478 Ccdc88bQ4QRL3 1481 aa23.61■■□□□ 1.37
Sdc3-201ENSMUST00000070478 Card11Q8CIS0 1159 aa23.6■■□□□ 1.37
Sdc3-201ENSMUST00000070478 Gm20521D3Z5F7 333 aa23.56■■□□□ 1.36
Sdc3-201ENSMUST00000070478 Fmn1Q05860 1466 aa23.55■■□□□ 1.36
Sdc3-201ENSMUST00000070478 Sycp2Q9CUU3 1500 aa23.54■■□□□ 1.36
Sdc3-201ENSMUST00000070478 Wdr43Q6ZQL4 677 aaKnown RBP23.53■■□□□ 1.36
Sdc3-201ENSMUST00000070478 Mia2Q91ZV0 1396 aa23.53■■□□□ 1.36
Sdc3-201ENSMUST00000070478 Trim26Q99PN3 545 aa23.52■■□□□ 1.36
Sdc3-201ENSMUST00000070478 Aplp2Q06335 707 aa23.52■■□□□ 1.36
Sdc3-201ENSMUST00000070478 Kif27Q7M6Z4 1394 aa23.51■■□□□ 1.35
Sdc3-201ENSMUST00000070478 Cep162Q6ZQ06 1403 aa23.5■■□□□ 1.35
Sdc3-201ENSMUST00000070478 Cwc22Q8C5N3 908 aaKnown RBP23.5■■□□□ 1.35
Sdc3-201ENSMUST00000070478 Stk24Q99KH8 431 aa23.48■■□□□ 1.35
Sdc3-201ENSMUST00000070478 Exosc9Q9JHI7 438 aaKnown RBP23.48■■□□□ 1.35
Sdc3-201ENSMUST00000070478 Fgd1P52734 960 aa23.47■■□□□ 1.35
Sdc3-201ENSMUST00000070478 Ofd1Q80Z25 1017 aa23.45■■□□□ 1.34
Sdc3-201ENSMUST00000070478 Aebp1Q640N1 1128 aa23.44■■□□□ 1.34
Sdc3-201ENSMUST00000070478 Hspa5P20029 655 aaKnown RBP23.39■■□□□ 1.34
Sdc3-201ENSMUST00000070478 CftrP26361 1476 aa23.36■■□□□ 1.33
Sdc3-201ENSMUST00000070478 Cux2P70298 1426 aa23.35■■□□□ 1.33
Sdc3-201ENSMUST00000070478 AknaQ80VW7 1404 aa23.35■■□□□ 1.33
Sdc3-201ENSMUST00000070478 Map4P27546 1125 aaKnown RBP23.35■■□□□ 1.33
Sdc3-201ENSMUST00000070478 Stag3O70576 1240 aa23.34■■□□□ 1.33
Sdc3-201ENSMUST00000070478 Irx6Q9ER75 438 aa23.34■■□□□ 1.33
Sdc3-201ENSMUST00000070478 Arid3cA6PWV5 409 aa23.34■■□□□ 1.33
Sdc3-201ENSMUST00000070478 Crybg2B7ZCC2 1516 aa23.33■■□□□ 1.32
Sdc3-201ENSMUST00000070478 MyclP10166 368 aa23.32■■□□□ 1.32
Sdc3-201ENSMUST00000070478 Rpap1Q80TE0 1409 aa23.32■■□□□ 1.32
Sdc3-201ENSMUST00000070478 Pkd2O35245 966 aa23.3■■□□□ 1.32
Sdc3-201ENSMUST00000070478 Ppp1r18Q8BQ30 594 aa23.29■■□□□ 1.32
Sdc3-201ENSMUST00000070478 Cecr2E9Q2Z1 1453 aa23.29■■□□□ 1.32
Sdc3-201ENSMUST00000070478 NgefQ8CHT1 710 aa23.27■■□□□ 1.31
Sdc3-201ENSMUST00000070478 Neurod2Q62414 383 aa23.26■■□□□ 1.31
Sdc3-201ENSMUST00000070478 Mapk8ip3Q9ESN9 1337 aa23.26■■□□□ 1.31
Sdc3-201ENSMUST00000070478 Baz1bQ9Z277 1479 aa23.25■■□□□ 1.31
Sdc3-201ENSMUST00000070478 Phldb1Q6PDH0 1371 aaKnown RBP23.24■■□□□ 1.31
Sdc3-201ENSMUST00000070478 Cabp1Q9JLK7 227 aa23.23■■□□□ 1.31
Sdc3-201ENSMUST00000070478 Apbb1Q9QXJ1 710 aa23.23■■□□□ 1.31
Sdc3-201ENSMUST00000070478 Fyco1Q8VDC1 1437 aa23.23■■□□□ 1.31
Sdc3-201ENSMUST00000070478 Trim30dE9PWL0 497 aa23.21■■□□□ 1.31
Sdc3-201ENSMUST00000070478 Cnga1P29974 684 aa23.2■■□□□ 1.3
Sdc3-201ENSMUST00000070478 CntlnA2AM05 1397 aa23.19■■□□□ 1.3
Sdc3-201ENSMUST00000070478 Trak1Q6PD31 939 aa23.18■■□□□ 1.3
Sdc3-201ENSMUST00000070478 Lemd3Q9WU40 921 aa23.18■■□□□ 1.3
Sdc3-201ENSMUST00000070478 Atad2bE9Q166 1460 aaKnown RBP23.17■■□□□ 1.3
Sdc3-201ENSMUST00000070478 Rundc1Q0VDN7 615 aa23.15■■□□□ 1.3
Sdc3-201ENSMUST00000070478 Wwc2Q6NXJ0 1187 aa23.13■■□□□ 1.29
Sdc3-201ENSMUST00000070478 Mphosph9A6H5Y1 991 aa23.11■■□□□ 1.29
Sdc3-201ENSMUST00000070478 Hsp90ab1P11499 724 aaKnown RBP23.11■■□□□ 1.29
Sdc3-201ENSMUST00000070478 Ifit1bl1D3Z6F0 470 aa23.1■■□□□ 1.29
Sdc3-201ENSMUST00000070478 CanxP35564 591 aaKnown RBP23.1■■□□□ 1.29
Sdc3-201ENSMUST00000070478 Carmil1Q6EDY6 1374 aa23.09■■□□□ 1.29
Sdc3-201ENSMUST00000070478 Gm6268A2A3U9 297 aa23.09■■□□□ 1.29
Sdc3-201ENSMUST00000070478 Iqcf3Q9D498 203 aa23.09■■□□□ 1.29
Sdc3-201ENSMUST00000070478 DekQ7TNV0 380 aaKnown RBP23.08■■□□□ 1.28
Sdc3-201ENSMUST00000070478 Smarca2Q6DIC0 1577 aa23.08■■□□□ 1.28
Sdc3-201ENSMUST00000070478 Synj1Q8CHC4 1574 aa23.07■■□□□ 1.28
Sdc3-201ENSMUST00000070478 Arhgap35Q91YM2 1499 aa23.07■■□□□ 1.28
Sdc3-201ENSMUST00000070478 Zfp777B9EKF4 885 aa23.06■■□□□ 1.28
Sdc3-201ENSMUST00000070478 Gtf2e1Q9D0D5 440 aa23.04■■□□□ 1.28
Sdc3-201ENSMUST00000070478 Sin3aQ60520 1274 aaKnown RBP23.03■■□□□ 1.28
Sdc3-201ENSMUST00000070478 Rapgef2Q8CHG7 1496 aa23.03■■□□□ 1.28
Sdc3-201ENSMUST00000070478 1700019A02RikA0A087WPV9 146 aa23.02■■□□□ 1.28
Sdc3-201ENSMUST00000070478 Stk26Q99JT2 416 aa23.02■■□□□ 1.28
Sdc3-201ENSMUST00000070478 Dhx57Q6P5D3 1388 aaKnown RBP23.02■■□□□ 1.28
Sdc3-201ENSMUST00000070478 NudcO35685 332 aaKnown RBP23.01■■□□□ 1.27
Sdc3-201ENSMUST00000070478 Vsig10D3YX43 558 aa23.01■■□□□ 1.27
Sdc3-201ENSMUST00000070478 Fhad1A6PWD2 1420 aa23.01■■□□□ 1.27
Sdc3-201ENSMUST00000070478 LrpprcQ6PB66 1392 aaKnown RBP23.01■■□□□ 1.27
Sdc3-201ENSMUST00000070478 Hsp90aa1P07901 733 aaKnown RBP23.01■■□□□ 1.27
Sdc3-201ENSMUST00000070478 ScribQ80U72 1612 aa22.99■■□□□ 1.27
Sdc3-201ENSMUST00000070478 Smarca4Q3TKT4 1613 aaKnown RBP22.97■■□□□ 1.27
Sdc3-201ENSMUST00000070478 Kif3bQ61771 747 aa22.97■■□□□ 1.27
Sdc3-201ENSMUST00000070478 Chmp4bQ9D8B3 224 aaKnown RBP22.94■■□□□ 1.26
Sdc3-201ENSMUST00000070478 Nup155Q99P88 1391 aaKnown RBP22.93■■□□□ 1.26
Sdc3-201ENSMUST00000070478 Arid4bA2CG63 1314 aaKnown RBP22.93■■□□□ 1.26
Sdc3-201ENSMUST00000070478 Tmf1B9EKI3 1091 aa22.92■■□□□ 1.26
Sdc3-201ENSMUST00000070478 1700123L14RikQ3V2K7 440 aa22.91■■□□□ 1.26
Sdc3-201ENSMUST00000070478 Sart1Q9Z315 806 aaKnown RBP22.91■■□□□ 1.26
Retrieved 100 of 22,080 RNA–protein pairs in 39.5 ms