RNA–Protein interactions for RNA: ENSMUST00000068439.12

Pdlim1-201, Transcript of PDZ and LIM domain protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pdlim1, Length 2,571 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1-201ENSMUST00000068439 Grin2aP35436 1464 aa24.18■■□□□ 1.46
Pdlim1-201ENSMUST00000068439 Arap1Q4LDD4 1452 aa24.18■■□□□ 1.46
Pdlim1-201ENSMUST00000068439 Cux1P53564 1515 aa24.16■■□□□ 1.46
Pdlim1-201ENSMUST00000068439 Polr1aO35134 1717 aaKnown RBP24.15■■□□□ 1.46
Pdlim1-201ENSMUST00000068439 Pbrm1Q8BSQ9 1634 aaKnown RBP24.15■■□□□ 1.46
Pdlim1-201ENSMUST00000068439 Gpatch8A2A6A1 1505 aa24.13■■□□□ 1.45
Pdlim1-201ENSMUST00000068439 Nup160Q9Z0W3 1402 aaKnown RBP24.11■■□□□ 1.45
Pdlim1-201ENSMUST00000068439 Rpgrip1Q9EPQ2 1331 aa24.11■■□□□ 1.45
Pdlim1-201ENSMUST00000068439 Arhgef5E9Q7D5 1581 aa24.11■■□□□ 1.45
Pdlim1-201ENSMUST00000068439 Rpap1Q80TE0 1409 aa24.1■■□□□ 1.45
Pdlim1-201ENSMUST00000068439 EprsQ8CGC7 1512 aaKnown RBP24.09■■□□□ 1.45
Pdlim1-201ENSMUST00000068439 Fyco1Q8VDC1 1437 aa24.08■■□□□ 1.45
Pdlim1-201ENSMUST00000068439 Setd1bQ8CFT2 1985 aa24.08■■□□□ 1.45
Pdlim1-201ENSMUST00000068439 Lmo7E9PYF4 1699 aaKnown RBP24.04■■□□□ 1.44
Pdlim1-201ENSMUST00000068439 Pcf11G3X9Z4 1553 aa24.01■■□□□ 1.43
Pdlim1-201ENSMUST00000068439 Adamts12Q811B3 1600 aa24■■□□□ 1.43
Pdlim1-201ENSMUST00000068439 Eif4g3Q80XI3 1579 aaKnown RBP23.99■■□□□ 1.43
Pdlim1-201ENSMUST00000068439 Cc2d2bA0A286YDU8 1405 aa23.99■■□□□ 1.43
Pdlim1-201ENSMUST00000068439 Ap3b1Q9Z1T1 1105 aa23.97■■□□□ 1.43
Pdlim1-201ENSMUST00000068439 Tiam1Q60610 1591 aa23.97■■□□□ 1.43
Pdlim1-201ENSMUST00000068439 CadpsQ80TJ1 1355 aa23.96■■□□□ 1.43
Pdlim1-201ENSMUST00000068439 Plekhg3Q4VAC9 1341 aa23.96■■□□□ 1.43
Pdlim1-201ENSMUST00000068439 WizO88286 1684 aaKnown RBP23.94■■□□□ 1.42
Pdlim1-201ENSMUST00000068439 Rusc2Q80U22 1514 aa23.93■■□□□ 1.42
Pdlim1-201ENSMUST00000068439 Abca5Q8K448 1642 aa23.93■■□□□ 1.42
Pdlim1-201ENSMUST00000068439 Gm7298A0A0N4SVU1 1476 aa23.92■■□□□ 1.42
Pdlim1-201ENSMUST00000068439 Naip1Q9QWK5 1403 aa23.91■■□□□ 1.42
Pdlim1-201ENSMUST00000068439 TchhA0A0B4J1F9 1599 aa23.9■■□□□ 1.42
Pdlim1-201ENSMUST00000068439 UbtfP25976 765 aaKnown RBP23.89■■□□□ 1.42
Pdlim1-201ENSMUST00000068439 CntlnA2AM05 1397 aa23.89■■□□□ 1.41
Pdlim1-201ENSMUST00000068439 Abca16E9PWJ7 1678 aa23.87■■□□□ 1.41
Pdlim1-201ENSMUST00000068439 PxdnQ3UQ28 1475 aa23.86■■□□□ 1.41
Pdlim1-201ENSMUST00000068439 Soga1E1U8D0 1418 aa23.86■■□□□ 1.41
Pdlim1-201ENSMUST00000068439 Aebp1Q640N1 1128 aa23.85■■□□□ 1.41
Pdlim1-201ENSMUST00000068439 Slx4Q6P1D7 1565 aa23.85■■□□□ 1.41
Pdlim1-201ENSMUST00000068439 Peg3Q3URU2 1571 aa23.84■■□□□ 1.41
Pdlim1-201ENSMUST00000068439 BlmO88700 1416 aa23.84■■□□□ 1.41
Pdlim1-201ENSMUST00000068439 Mier1Q5UAK0 511 aa23.77■■□□□ 1.4
Pdlim1-201ENSMUST00000068439 Abcc2Q8VI47 1543 aa23.76■■□□□ 1.39
Pdlim1-201ENSMUST00000068439 Gm1043A0A140LJC2 1431 aa23.69■■□□□ 1.38
Pdlim1-201ENSMUST00000068439 Arhgap27A2AB59 869 aa23.67■■□□□ 1.38
Pdlim1-201ENSMUST00000068439 Shroom2A2ALU4 1481 aa23.65■■□□□ 1.38
Pdlim1-201ENSMUST00000068439 Ncapd3Q6ZQK0 1506 aa23.65■■□□□ 1.38
Pdlim1-201ENSMUST00000068439 WrnO09053 1401 aa23.64■■□□□ 1.38
Pdlim1-201ENSMUST00000068439 Kif27Q7M6Z4 1394 aa23.64■■□□□ 1.37
Pdlim1-201ENSMUST00000068439 Map3k4O08648 1597 aa23.63■■□□□ 1.37
Pdlim1-201ENSMUST00000068439 Lmod2Q3UHZ5 550 aa23.61■■□□□ 1.37
Pdlim1-201ENSMUST00000068439 Dnmt1P13864 1620 aaKnown RBP23.59■■□□□ 1.37
Pdlim1-201ENSMUST00000068439 Fgd6Q69ZL1 1399 aa23.55■■□□□ 1.36
Pdlim1-201ENSMUST00000068439 BC005561E9Q5E2 1589 aa23.53■■□□□ 1.36
Pdlim1-201ENSMUST00000068439 Rapgef6Q5NCJ1 1609 aa23.51■■□□□ 1.35
Pdlim1-201ENSMUST00000068439 Lmtk2Q3TYD6 1471 aa23.49■■□□□ 1.35
Pdlim1-201ENSMUST00000068439 Neo1P97798 1493 aa23.47■■□□□ 1.35
Pdlim1-201ENSMUST00000068439 NefmP08553 848 aa23.47■■□□□ 1.35
Pdlim1-201ENSMUST00000068439 3425401B19RikD3Z1D3 1412 aa23.44■■□□□ 1.34
Pdlim1-201ENSMUST00000068439 AknaQ80VW7 1404 aa23.43■■□□□ 1.34
Pdlim1-201ENSMUST00000068439 Arhgap31A6X8Z5 1425 aa23.42■■□□□ 1.34
Pdlim1-201ENSMUST00000068439 Zcchc11B2RX14 1644 aaKnown RBP23.42■■□□□ 1.34
Pdlim1-201ENSMUST00000068439 NexmifQ5DTT1 1515 aa23.41■■□□□ 1.34
Pdlim1-201ENSMUST00000068439 Mug1P28665 1476 aa23.41■■□□□ 1.34
Pdlim1-201ENSMUST00000068439 Arhgef11Q68FM7 1552 aa23.4■■□□□ 1.34
Pdlim1-201ENSMUST00000068439 Arhgef12Q8R4H2 1543 aaKnown RBP23.4■■□□□ 1.34
Pdlim1-201ENSMUST00000068439 Ccnb3Q810T2 1396 aa23.4■■□□□ 1.34
Pdlim1-201ENSMUST00000068439 Ncoa3O09000 1398 aa23.39■■□□□ 1.34
Pdlim1-201ENSMUST00000068439 Ncoa2Q61026 1462 aa23.38■■□□□ 1.33
Pdlim1-201ENSMUST00000068439 Gcc2Q8CHG3 1679 aa23.38■■□□□ 1.33
Pdlim1-201ENSMUST00000068439 Ccdc141E9Q8Q6 1531 aa23.37■■□□□ 1.33
Pdlim1-201ENSMUST00000068439 Rrbp1Q99PL5 1605 aaKnown RBP23.37■■□□□ 1.33
Pdlim1-201ENSMUST00000068439 Jph4Q80WT0 628 aa23.37■■□□□ 1.33
Pdlim1-201ENSMUST00000068439 Kdm5bQ80Y84 1544 aa23.33■■□□□ 1.33
Pdlim1-201ENSMUST00000068439 Mroh2aD3Z750 1679 aa23.31■■□□□ 1.32
Pdlim1-201ENSMUST00000068439 Kiaa1551Q5DTW7 1521 aa23.31■■□□□ 1.32
Pdlim1-201ENSMUST00000068439 Gm14025A2AP89 1413 aa23.3■■□□□ 1.32
Pdlim1-201ENSMUST00000068439 Magi1Q6RHR9 1471 aa23.3■■□□□ 1.32
Pdlim1-201ENSMUST00000068439 Cdc42bpaQ3UU96 1719 aa23.29■■□□□ 1.32
Pdlim1-201ENSMUST00000068439 Abcc1O35379 1528 aa23.29■■□□□ 1.32
Pdlim1-201ENSMUST00000068439 Dhx57Q6P5D3 1388 aaKnown RBP23.28■■□□□ 1.32
Pdlim1-201ENSMUST00000068439 A2mQ6GQT1 1474 aa23.25■■□□□ 1.31
Pdlim1-201ENSMUST00000068439 Fam163aQ8CAA5 168 aa23.25■■□□□ 1.31
Pdlim1-201ENSMUST00000068439 Chd1P40201 1711 aa23.24■■□□□ 1.31
Pdlim1-201ENSMUST00000068439 Mapkbp1Q6NS57 1503 aa23.23■■□□□ 1.31
Pdlim1-201ENSMUST00000068439 Naip2Q9QUK4 1447 aa23.23■■□□□ 1.31
Pdlim1-201ENSMUST00000068439 Fam50aQ9WV03 339 aaKnown RBP23.21■■□□□ 1.31
Pdlim1-201ENSMUST00000068439 Mia2Q91ZV0 1396 aa23.2■■□□□ 1.3
Pdlim1-201ENSMUST00000068439 Prex2Q3LAC4 1598 aa23.18■■□□□ 1.3
Pdlim1-201ENSMUST00000068439 Fhad1A6PWD2 1420 aa23.18■■□□□ 1.3
Pdlim1-201ENSMUST00000068439 Fancd2Q80V62 1450 aa23.17■■□□□ 1.3
Pdlim1-201ENSMUST00000068439 Fkbp15Q6P9Q6 1216 aaKnown RBP23.14■■□□□ 1.29
Pdlim1-201ENSMUST00000068439 Arhgef40Q3UPH7 1517 aa23.14■■□□□ 1.29
Pdlim1-201ENSMUST00000068439 Vps8Q0P5W1 1427 aa23.13■■□□□ 1.29
Pdlim1-201ENSMUST00000068439 Adcy10Q8C0T9 1614 aa23.13■■□□□ 1.29
Pdlim1-201ENSMUST00000068439 UacaQ8CGB3 1411 aa23.1■■□□□ 1.29
Pdlim1-201ENSMUST00000068439 Cul7Q8VE73 1689 aa23.09■■□□□ 1.29
Pdlim1-201ENSMUST00000068439 NhsB1AV60 1647 aa23.07■■□□□ 1.28
Pdlim1-201ENSMUST00000068439 Abcc5Q9R1X5 1436 aa23.07■■□□□ 1.28
Pdlim1-201ENSMUST00000068439 Kiaa1210E9Q0C6 1637 aa23.07■■□□□ 1.28
Pdlim1-201ENSMUST00000068439 Fam208aQ69ZR9 1610 aaKnown RBP23.07■■□□□ 1.28
Pdlim1-201ENSMUST00000068439 Mlh3A0A1Y7VMP7 1443 aa23.06■■□□□ 1.28
Pdlim1-201ENSMUST00000068439 Kdm6bQ5NCY0 1641 aa23.05■■□□□ 1.28
Pdlim1-201ENSMUST00000068439 Plekhh2Q8C115 1491 aa23.04■■□□□ 1.28
Retrieved 100 of 22,080 RNA–protein pairs in 20.5 ms