RNA–Protein interactions for RNA: ENSMUST00000060479.13

Ush2a-201, Transcript of Usherin, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ush2a, Length 15,695 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2a-201ENSMUST00000060479 Setd5Q5XJV7 1441 aa6.95□□□□□ -1.3
Ush2a-201ENSMUST00000060479 Sin3aQ60520 1274 aaKnown RBP6.94□□□□□ -1.3
Ush2a-201ENSMUST00000060479 Wwc2Q6NXJ0 1187 aa6.94□□□□□ -1.3
Ush2a-201ENSMUST00000060479 Supt16hQ920B9 1047 aa6.94□□□□□ -1.3
Ush2a-201ENSMUST00000060479 Nolc1E9Q5C9 702 aaKnown RBP6.93□□□□□ -1.3
Ush2a-201ENSMUST00000060479 Cwc22Q8C5N3 908 aaKnown RBP6.93□□□□□ -1.3
Ush2a-201ENSMUST00000060479 Hdac5Q9Z2V6 1113 aa6.93□□□□□ -1.3
Ush2a-201ENSMUST00000060479 Rgl3Q3UYI5 709 aa6.91□□□□□ -1.3
Ush2a-201ENSMUST00000060479 Golga3P55937 1487 aa6.91□□□□□ -1.3
Ush2a-201ENSMUST00000060479 CanxP35564 591 aaKnown RBP6.9□□□□□ -1.3
Ush2a-201ENSMUST00000060479 Prdm10Q3UTQ7 1184 aa6.9□□□□□ -1.31
Ush2a-201ENSMUST00000060479 Fkbp15Q6P9Q6 1216 aaKnown RBP6.9□□□□□ -1.31
Ush2a-201ENSMUST00000060479 Gm35339A0A140LHH9 1649 aa6.9□□□□□ -1.31
Ush2a-201ENSMUST00000060479 Polr3glQ8R0C0 218 aa6.89□□□□□ -1.31
Ush2a-201ENSMUST00000060479 Erich6D3Z6S9 713 aa6.88□□□□□ -1.31
Ush2a-201ENSMUST00000060479 Tcerg1Q8CGF7 1100 aaKnown RBP6.87□□□□□ -1.31
Ush2a-201ENSMUST00000060479 ArxO35085 564 aa6.87□□□□□ -1.31
Ush2a-201ENSMUST00000060479 Eea1Q8BL66 1411 aa6.85□□□□□ -1.31
Ush2a-201ENSMUST00000060479 CatipB9EKE5 520 aa6.85□□□□□ -1.31
Ush2a-201ENSMUST00000060479 Ifnlr1Q8CGK5 535 aa6.85□□□□□ -1.31
Ush2a-201ENSMUST00000060479 Card11Q8CIS0 1159 aa6.84□□□□□ -1.31
Ush2a-201ENSMUST00000060479 Grwd1Q810D6 446 aaKnown RBP6.84□□□□□ -1.31
Ush2a-201ENSMUST00000060479 Ipo9Q91YE6 1041 aa6.84□□□□□ -1.31
Ush2a-201ENSMUST00000060479 Ppm1gQ61074 542 aa6.84□□□□□ -1.31
Ush2a-201ENSMUST00000060479 Aebp1Q640N1 1128 aa6.84□□□□□ -1.31
Ush2a-201ENSMUST00000060479 Gm13695A2AK44 830 aa6.84□□□□□ -1.32
Ush2a-201ENSMUST00000060479 Clstn2Q9ER65 966 aa6.84□□□□□ -1.32
Ush2a-201ENSMUST00000060479 Ccdc88bQ4QRL3 1481 aa6.83□□□□□ -1.32
Ush2a-201ENSMUST00000060479 Irx3P81067 507 aa6.83□□□□□ -1.32
Ush2a-201ENSMUST00000060479 Znf710Q3U288 666 aa6.83□□□□□ -1.32
Ush2a-201ENSMUST00000060479 Mphosph9A6H5Y1 991 aa6.82□□□□□ -1.32
Ush2a-201ENSMUST00000060479 Exoc6Q8R313 802 aa6.82□□□□□ -1.32
Ush2a-201ENSMUST00000060479 Dbr1Q923B1 550 aa6.82□□□□□ -1.32
Ush2a-201ENSMUST00000060479 B4galnt3Q6L8S8 986 aa6.81□□□□□ -1.32
Ush2a-201ENSMUST00000060479 Trim30dE9PWL0 497 aa6.81□□□□□ -1.32
Ush2a-201ENSMUST00000060479 Apbb1Q9QXJ1 710 aa6.81□□□□□ -1.32
Ush2a-201ENSMUST00000060479 Pkd2O35245 966 aa6.81□□□□□ -1.32
Ush2a-201ENSMUST00000060479 Hsp90ab1P11499 724 aaKnown RBP6.8□□□□□ -1.32
Ush2a-201ENSMUST00000060479 Rundc1Q0VDN7 615 aa6.8□□□□□ -1.32
Ush2a-201ENSMUST00000060479 Cep162Q6ZQ06 1403 aa6.8□□□□□ -1.32
Ush2a-201ENSMUST00000060479 Htatsf1Q8BGC0 757 aa6.79□□□□□ -1.32
Ush2a-201ENSMUST00000060479 Trim26Q99PN3 545 aa6.79□□□□□ -1.32
Ush2a-201ENSMUST00000060479 Kif15Q6P9L6 1387 aa6.78□□□□□ -1.32
Ush2a-201ENSMUST00000060479 Pknox2Q8BG99 474 aa6.78□□□□□ -1.32
Ush2a-201ENSMUST00000060479 Rwdd1Q9CQK7 243 aa6.78□□□□□ -1.32
Ush2a-201ENSMUST00000060479 DekQ7TNV0 380 aaKnown RBP6.78□□□□□ -1.32
Ush2a-201ENSMUST00000060479 Cabp1Q9JLK7 227 aa6.78□□□□□ -1.32
Ush2a-201ENSMUST00000060479 Neurod2Q62414 383 aa6.77□□□□□ -1.33
Ush2a-201ENSMUST00000060479 Mbd3Q9Z2D8 285 aaKnown RBP6.77□□□□□ -1.33
Ush2a-201ENSMUST00000060479 Rangap1P46061 589 aaKnown RBP6.77□□□□□ -1.33
Ush2a-201ENSMUST00000060479 Mia2Q91ZV0 1396 aa6.77□□□□□ -1.33
Ush2a-201ENSMUST00000060479 Kdm2aP59997 1161 aa6.76□□□□□ -1.33
Ush2a-201ENSMUST00000060479 Chmp5Q9D7S9 219 aa6.76□□□□□ -1.33
Ush2a-201ENSMUST00000060479 Zscan21Q07231 555 aa6.76□□□□□ -1.33
Ush2a-201ENSMUST00000060479 Mroh3A0A1D5RM54 893 aa6.75□□□□□ -1.33
Ush2a-201ENSMUST00000060479 Mak16Q8BGS0 296 aaKnown RBP6.75□□□□□ -1.33
Ush2a-201ENSMUST00000060479 Trak1Q6PD31 939 aa6.74□□□□□ -1.33
Ush2a-201ENSMUST00000060479 Atp1b4Q99ME6 356 aa6.74□□□□□ -1.33
Ush2a-201ENSMUST00000060479 Rrp7aQ9D1C9 280 aaKnown RBP6.74□□□□□ -1.33
Ush2a-201ENSMUST00000060479 Arhgap27A2AB59 869 aa6.74□□□□□ -1.33
Ush2a-201ENSMUST00000060479 Gm20521D3Z5F7 333 aa6.74□□□□□ -1.33
Ush2a-201ENSMUST00000060479 Ythdc1E9Q5K9 736 aaKnown RBP6.74□□□□□ -1.33
Ush2a-201ENSMUST00000060479 AU015836B2RUM3 263 aa6.74□□□□□ -1.33
Ush2a-201ENSMUST00000060479 EspnQ9ET47 871 aa6.73□□□□□ -1.33
Ush2a-201ENSMUST00000060479 Vsig10D3YX43 558 aa6.73□□□□□ -1.33
Ush2a-201ENSMUST00000060479 Gtf3c3Q3TMP1 882 aa6.73□□□□□ -1.33
Ush2a-201ENSMUST00000060479 ChgaP26339 463 aaKnown RBP6.73□□□□□ -1.33
Ush2a-201ENSMUST00000060479 NacadQ5SWP3 1504 aa6.72□□□□□ -1.33
Ush2a-201ENSMUST00000060479 PnisrA2AJT4 805 aaKnown RBP6.72□□□□□ -1.33
Ush2a-201ENSMUST00000060479 Lmod3E9QA62 571 aa6.71□□□□□ -1.34
Ush2a-201ENSMUST00000060479 Spryd3E9Q9B3 442 aa6.71□□□□□ -1.34
Ush2a-201ENSMUST00000060479 CntlnA2AM05 1397 aa6.71□□□□□ -1.34
Ush2a-201ENSMUST00000060479 Plcb2A3KGF7 1181 aa6.7□□□□□ -1.34
Ush2a-201ENSMUST00000060479 Slc4a2P13808 1237 aaKnown RBP6.7□□□□□ -1.34
Ush2a-201ENSMUST00000060479 Dnai1Q8C0M8 701 aa6.7□□□□□ -1.34
Ush2a-201ENSMUST00000060479 Trim44Q9QXA7 346 aa6.7□□□□□ -1.34
Ush2a-201ENSMUST00000060479 Ipo8Q7TMY7 1010 aa6.7□□□□□ -1.34
Ush2a-201ENSMUST00000060479 Pak3Q61036 559 aa6.7□□□□□ -1.34
Ush2a-201ENSMUST00000060479 Map4P27546 1125 aaKnown RBP6.69□□□□□ -1.34
Ush2a-201ENSMUST00000060479 Armcx1Q9CX83 456 aa6.69□□□□□ -1.34
Ush2a-201ENSMUST00000060479 Pank3Q8R2W9 370 aa6.69□□□□□ -1.34
Ush2a-201ENSMUST00000060479 Washc2Q6PGL7 1334 aa6.69□□□□□ -1.34
Ush2a-201ENSMUST00000060479 Srpk2O54781 681 aaKnown RBP6.68□□□□□ -1.34
Ush2a-201ENSMUST00000060479 Tmf1B9EKI3 1091 aa6.67□□□□□ -1.34
Ush2a-201ENSMUST00000060479 Speer4f1Q9D5Q6 258 aa6.67□□□□□ -1.34
Ush2a-201ENSMUST00000060479 NudcO35685 332 aaKnown RBP6.67□□□□□ -1.34
Ush2a-201ENSMUST00000060479 Dnttip2Q8R2M2 758 aaKnown RBP6.67□□□□□ -1.34
Ush2a-201ENSMUST00000060479 Smg6P61406 1418 aaKnown RBP6.67□□□□□ -1.34
Ush2a-201ENSMUST00000060479 Rb1cc1Q9ESK9 1588 aa6.66□□□□□ -1.34
Ush2a-201ENSMUST00000060479 Stk24Q99KH8 431 aa6.65□□□□□ -1.34
Ush2a-201ENSMUST00000060479 Cnga1P29974 684 aa6.65□□□□□ -1.34
Ush2a-201ENSMUST00000060479 Ifit1bl1D3Z6F0 470 aa6.65□□□□□ -1.34
Ush2a-201ENSMUST00000060479 Esx1O88933 382 aa6.64□□□□□ -1.35
Ush2a-201ENSMUST00000060479 Map7O88735 730 aa6.64□□□□□ -1.35
Ush2a-201ENSMUST00000060479 Taok2Q6ZQ29 1240 aa6.64□□□□□ -1.35
Ush2a-201ENSMUST00000060479 Gtf2e1Q9D0D5 440 aa6.64□□□□□ -1.35
Ush2a-201ENSMUST00000060479 IqubQ8CDK3 788 aa6.64□□□□□ -1.35
Ush2a-201ENSMUST00000060479 Mre11Q61216 706 aa6.63□□□□□ -1.35
Ush2a-201ENSMUST00000060479 CrbnQ8C7D2 445 aa6.63□□□□□ -1.35
Ush2a-201ENSMUST00000060479 Mtus2Q3UHD3 1353 aa6.63□□□□□ -1.35
Retrieved 100 of 22,080 RNA–protein pairs in 26 ms