RNA–Protein interactions for RNA: ENSMUST00000047511.13

Shtn1-201, Transcript of Shootin-1, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Shtn1, Length 4,081 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shtn1-201ENSMUST00000047511 Anks4bQ8K3X6 423 aa16.55■□□□□ 0.24
Shtn1-201ENSMUST00000047511 4933416C03RikQ3V063 378 aa16.52■□□□□ 0.24
Shtn1-201ENSMUST00000047511 Cep162Q6ZQ06 1403 aa16.51■□□□□ 0.23
Shtn1-201ENSMUST00000047511 Gm13697A2AK42 830 aa16.5■□□□□ 0.23
Shtn1-201ENSMUST00000047511 Tnnt3Q9QZ47 272 aa16.5■□□□□ 0.23
Shtn1-201ENSMUST00000047511 Smarca4Q3TKT4 1613 aaKnown RBP16.5■□□□□ 0.23
Shtn1-201ENSMUST00000047511 Atp1b4Q99ME6 356 aa16.5■□□□□ 0.23
Shtn1-201ENSMUST00000047511 Fmn1Q05860 1466 aa16.47■□□□□ 0.23
Shtn1-201ENSMUST00000047511 Ccer2J3QPU5 274 aa16.46■□□□□ 0.23
Shtn1-201ENSMUST00000047511 Aplp2Q06335 707 aa16.46■□□□□ 0.23
Shtn1-201ENSMUST00000047511 Dnajc5bQ9CQ94 199 aa16.44■□□□□ 0.22
Shtn1-201ENSMUST00000047511 Phldb1Q6PDH0 1371 aaKnown RBP16.44■□□□□ 0.22
Shtn1-201ENSMUST00000047511 Rgl3Q3UYI5 709 aa16.41■□□□□ 0.22
Shtn1-201ENSMUST00000047511 Cttnbp2B9EJA2 1648 aa16.41■□□□□ 0.22
Shtn1-201ENSMUST00000047511 Cux2P70298 1426 aa16.39■□□□□ 0.21
Shtn1-201ENSMUST00000047511 Rapgef2Q8CHG7 1496 aa16.37■□□□□ 0.21
Shtn1-201ENSMUST00000047511 NeflP08551 543 aa16.36■□□□□ 0.21
Shtn1-201ENSMUST00000047511 Iqgap2Q3UQ44 1575 aa16.35■□□□□ 0.21
Shtn1-201ENSMUST00000047511 Aebp1Q640N1 1128 aa16.34■□□□□ 0.21
Shtn1-201ENSMUST00000047511 Hspa5P20029 655 aaKnown RBP16.33■□□□□ 0.21
Shtn1-201ENSMUST00000047511 Grwd1Q810D6 446 aaKnown RBP16.33■□□□□ 0.2
Shtn1-201ENSMUST00000047511 Mrs2Q5NCE8 434 aa16.32■□□□□ 0.2
Shtn1-201ENSMUST00000047511 Fam71e1A1L3C1 212 aa16.3■□□□□ 0.2
Shtn1-201ENSMUST00000047511 Cc2d2aQ8CFW7 1633 aa16.29■□□□□ 0.2
Shtn1-201ENSMUST00000047511 Gm13695A2AK44 830 aa16.25■□□□□ 0.19
Shtn1-201ENSMUST00000047511 Baz1bQ9Z277 1479 aa16.25■□□□□ 0.19
Shtn1-201ENSMUST00000047511 Rrp7aQ9D1C9 280 aaKnown RBP16.24■□□□□ 0.19
Shtn1-201ENSMUST00000047511 Nlrp6Q91WS2 869 aa16.23■□□□□ 0.19
Shtn1-201ENSMUST00000047511 Rad21Q61550 635 aaKnown RBP16.22■□□□□ 0.19
Shtn1-201ENSMUST00000047511 Kif27Q7M6Z4 1394 aa16.22■□□□□ 0.19
Shtn1-201ENSMUST00000047511 Kdm2aP59997 1161 aa16.21■□□□□ 0.19
Shtn1-201ENSMUST00000047511 Polr3glQ8R0C0 218 aa16.2■□□□□ 0.18
Shtn1-201ENSMUST00000047511 Rpap1Q80TE0 1409 aa16.19■□□□□ 0.18
Shtn1-201ENSMUST00000047511 Rangap1P46061 589 aaKnown RBP16.19■□□□□ 0.18
Shtn1-201ENSMUST00000047511 Anp32aO35381 247 aa16.18■□□□□ 0.18
Shtn1-201ENSMUST00000047511 Cabp1Q9JLK7 227 aa16.18■□□□□ 0.18
Shtn1-201ENSMUST00000047511 Clstn2Q9ER65 966 aa16.17■□□□□ 0.18
Shtn1-201ENSMUST00000047511 Arid3cA6PWV5 409 aa16.16■□□□□ 0.18
Shtn1-201ENSMUST00000047511 Top2bQ64511 1612 aa16.16■□□□□ 0.18
Shtn1-201ENSMUST00000047511 Sin3aQ60520 1274 aaKnown RBP16.16■□□□□ 0.18
Shtn1-201ENSMUST00000047511 LrpprcQ6PB66 1392 aaKnown RBP16.15■□□□□ 0.18
Shtn1-201ENSMUST00000047511 Mtus2Q3UHD3 1353 aa16.14■□□□□ 0.17
Shtn1-201ENSMUST00000047511 PrkcshO08795 521 aa16.14■□□□□ 0.17
Shtn1-201ENSMUST00000047511 P3h3Q8CG70 732 aa16.14■□□□□ 0.17
Shtn1-201ENSMUST00000047511 Rtl5Q5DTT4 599 aa16.14■□□□□ 0.17
Shtn1-201ENSMUST00000047511 AknaQ80VW7 1404 aa16.12■□□□□ 0.17
Shtn1-201ENSMUST00000047511 DaxxO35613 739 aa16.1■□□□□ 0.17
Shtn1-201ENSMUST00000047511 Dhx29Q6PGC1 1365 aaKnown RBP16.1■□□□□ 0.17
Shtn1-201ENSMUST00000047511 Frmpd1A2AKB4 1549 aa16.08■□□□□ 0.17
Shtn1-201ENSMUST00000047511 Mroh3A0A1D5RM54 893 aa16.08■□□□□ 0.17
Shtn1-201ENSMUST00000047511 Pkd2O35245 966 aa16.08■□□□□ 0.16
Shtn1-201ENSMUST00000047511 Card11Q8CIS0 1159 aa16.06■□□□□ 0.16
Shtn1-201ENSMUST00000047511 Calr4Q3TQS0 420 aa16.05■□□□□ 0.16
Shtn1-201ENSMUST00000047511 Top2aQ01320 1528 aaKnown RBP16.05■□□□□ 0.16
Shtn1-201ENSMUST00000047511 Trak1Q6PD31 939 aa16.05■□□□□ 0.16
Shtn1-201ENSMUST00000047511 Stk24Q99KH8 431 aa16.04■□□□□ 0.16
Shtn1-201ENSMUST00000047511 Carmil1Q6EDY6 1374 aa16.04■□□□□ 0.16
Shtn1-201ENSMUST00000047511 Mia2Q91ZV0 1396 aa16.03■□□□□ 0.16
Shtn1-201ENSMUST00000047511 Wwc2Q6NXJ0 1187 aa16.02■□□□□ 0.16
Shtn1-201ENSMUST00000047511 Map4P27546 1125 aaKnown RBP16.02■□□□□ 0.15
Shtn1-201ENSMUST00000047511 Hdac5Q9Z2V6 1113 aa16.01■□□□□ 0.15
Shtn1-201ENSMUST00000047511 CntlnA2AM05 1397 aa16.01■□□□□ 0.15
Shtn1-201ENSMUST00000047511 SafbD3YXK2 937 aaKnown RBP16.01■□□□□ 0.15
Shtn1-201ENSMUST00000047511 Ppp4r2Q0VGB7 417 aa16.01■□□□□ 0.15
Shtn1-201ENSMUST00000047511 Mphosph9A6H5Y1 991 aa16■□□□□ 0.15
Shtn1-201ENSMUST00000047511 Fyco1Q8VDC1 1437 aa15.99■□□□□ 0.15
Shtn1-201ENSMUST00000047511 Safb2Q80YR5 991 aaKnown RBP15.98■□□□□ 0.15
Shtn1-201ENSMUST00000047511 ArxO35085 564 aa15.97■□□□□ 0.15
Shtn1-201ENSMUST00000047511 PtprkP35822 1457 aa15.97■□□□□ 0.15
Shtn1-201ENSMUST00000047511 Ppp1r18Q8BQ30 594 aa15.97■□□□□ 0.15
Shtn1-201ENSMUST00000047511 Ccnb3Q810T2 1396 aa15.95■□□□□ 0.14
Shtn1-201ENSMUST00000047511 Gm20521D3Z5F7 333 aa15.94■□□□□ 0.14
Shtn1-201ENSMUST00000047511 Trim26Q99PN3 545 aa15.93■□□□□ 0.14
Shtn1-201ENSMUST00000047511 Wdr62Q3U3T8 1523 aa15.93■□□□□ 0.14
Shtn1-201ENSMUST00000047511 4930567H17RikQ3V0K5 233 aa15.93■□□□□ 0.14
Shtn1-201ENSMUST00000047511 Rad54l2Q99NG0 1466 aa15.91■□□□□ 0.14
Shtn1-201ENSMUST00000047511 Srpk2O54781 681 aaKnown RBP15.91■□□□□ 0.14
Shtn1-201ENSMUST00000047511 Cnga1P29974 684 aa15.91■□□□□ 0.14
Shtn1-201ENSMUST00000047511 Rundc1Q0VDN7 615 aa15.91■□□□□ 0.14
Shtn1-201ENSMUST00000047511 Ofd1Q80Z25 1017 aa15.9■□□□□ 0.14
Shtn1-201ENSMUST00000047511 WrnO09053 1401 aa15.9■□□□□ 0.14
Shtn1-201ENSMUST00000047511 Ecm2Q5FW85 670 aa15.89■□□□□ 0.14
Shtn1-201ENSMUST00000047511 Arhgap35Q91YM2 1499 aa15.88■□□□□ 0.13
Shtn1-201ENSMUST00000047511 Pabpn1Q8CCS6 302 aaKnown RBP15.87■□□□□ 0.13
Shtn1-201ENSMUST00000047511 Ifit1bl1D3Z6F0 470 aa15.87■□□□□ 0.13
Shtn1-201ENSMUST00000047511 Apbb1Q9QXJ1 710 aa15.85■□□□□ 0.13
Shtn1-201ENSMUST00000047511 Sart1Q9Z315 806 aaKnown RBP15.85■□□□□ 0.13
Shtn1-201ENSMUST00000047511 Mrc2Q64449 1479 aa15.85■□□□□ 0.13
Shtn1-201ENSMUST00000047511 Cwc22Q8C5N3 908 aaKnown RBP15.83■□□□□ 0.12
Shtn1-201ENSMUST00000047511 Neurod2Q62414 383 aa15.83■□□□□ 0.12
Shtn1-201ENSMUST00000047511 Wdr43Q6ZQL4 677 aaKnown RBP15.82■□□□□ 0.12
Shtn1-201ENSMUST00000047511 Urb2E9Q7L1 1524 aaKnown RBP15.82■□□□□ 0.12
Shtn1-201ENSMUST00000047511 Shroom4Q1W617 1475 aa15.82■□□□□ 0.12
Shtn1-201ENSMUST00000047511 Kif3bQ61771 747 aa15.8■□□□□ 0.12
Shtn1-201ENSMUST00000047511 Efcab5A0JP43 1406 aa15.8■□□□□ 0.12
Shtn1-201ENSMUST00000047511 Exoc6Q8R313 802 aa15.79■□□□□ 0.12
Shtn1-201ENSMUST00000047511 Exosc9Q9JHI7 438 aaKnown RBP15.79■□□□□ 0.12
Shtn1-201ENSMUST00000047511 Lemd3Q9WU40 921 aa15.79■□□□□ 0.12
Shtn1-201ENSMUST00000047511 Zfp644E9QA22 1323 aa15.79■□□□□ 0.12
Shtn1-201ENSMUST00000047511 Duox2A2AQ99 1517 aa15.78■□□□□ 0.12
Retrieved 100 of 22,080 RNA–protein pairs in 97 ms