RNA–Protein interactions for RNA: ENSMUST00000044565.14

Col16a1-201, Transcript of Collagen alpha-1(XVI) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col16a1, Length 5,206 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1-201ENSMUST00000044565 CftrP26361 1476 aa20.74■□□□□ 0.91
Col16a1-201ENSMUST00000044565 Smarca2Q6DIC0 1577 aa20.74■□□□□ 0.91
Col16a1-201ENSMUST00000044565 Polr3glQ8R0C0 218 aa20.74■□□□□ 0.91
Col16a1-201ENSMUST00000044565 Phldb1Q6PDH0 1371 aaKnown RBP20.74■□□□□ 0.91
Col16a1-201ENSMUST00000044565 Upf2A2AT37 1269 aaKnown RBP20.7■□□□□ 0.9
Col16a1-201ENSMUST00000044565 Smarca4Q3TKT4 1613 aaKnown RBP20.7■□□□□ 0.9
Col16a1-201ENSMUST00000044565 Myt1Q8CFC2 1127 aa20.69■□□□□ 0.9
Col16a1-201ENSMUST00000044565 Cecr2E9Q2Z1 1453 aa20.69■□□□□ 0.9
Col16a1-201ENSMUST00000044565 P3h3Q8CG70 732 aa20.68■□□□□ 0.9
Col16a1-201ENSMUST00000044565 Mia2Q91ZV0 1396 aa20.67■□□□□ 0.9
Col16a1-201ENSMUST00000044565 Rgl3Q3UYI5 709 aa20.66■□□□□ 0.9
Col16a1-201ENSMUST00000044565 Cux2P70298 1426 aa20.65■□□□□ 0.9
Col16a1-201ENSMUST00000044565 DiexfQ8BTT6 772 aaKnown RBP20.65■□□□□ 0.9
Col16a1-201ENSMUST00000044565 IqubQ8CDK3 788 aa20.64■□□□□ 0.89
Col16a1-201ENSMUST00000044565 Kif27Q7M6Z4 1394 aa20.63■□□□□ 0.89
Col16a1-201ENSMUST00000044565 Sall2Q9QX96 1004 aa20.62■□□□□ 0.89
Col16a1-201ENSMUST00000044565 Rrp7aQ9D1C9 280 aaKnown RBP20.62■□□□□ 0.89
Col16a1-201ENSMUST00000044565 Anp32aO35381 247 aa20.61■□□□□ 0.89
Col16a1-201ENSMUST00000044565 Cep162Q6ZQ06 1403 aa20.6■□□□□ 0.89
Col16a1-201ENSMUST00000044565 Ccdc88bQ4QRL3 1481 aa20.58■□□□□ 0.88
Col16a1-201ENSMUST00000044565 Srpk2O54781 681 aaKnown RBP20.57■□□□□ 0.88
Col16a1-201ENSMUST00000044565 Mroh3A0A1D5RM54 893 aa20.56■□□□□ 0.88
Col16a1-201ENSMUST00000044565 Synj1Q8CHC4 1574 aa20.53■□□□□ 0.88
Col16a1-201ENSMUST00000044565 AknaQ80VW7 1404 aa20.53■□□□□ 0.88
Col16a1-201ENSMUST00000044565 Mrs2Q5NCE8 434 aa20.53■□□□□ 0.88
Col16a1-201ENSMUST00000044565 Cwc22Q8C5N3 908 aaKnown RBP20.5■□□□□ 0.87
Col16a1-201ENSMUST00000044565 Baz1bQ9Z277 1479 aa20.48■□□□□ 0.87
Col16a1-201ENSMUST00000044565 Rpap1Q80TE0 1409 aa20.48■□□□□ 0.87
Col16a1-201ENSMUST00000044565 Cttnbp2B9EJA2 1648 aa20.47■□□□□ 0.87
Col16a1-201ENSMUST00000044565 Aebp1Q640N1 1128 aa20.47■□□□□ 0.87
Col16a1-201ENSMUST00000044565 Gm20521D3Z5F7 333 aa20.46■□□□□ 0.87
Col16a1-201ENSMUST00000044565 Ppp1r18Q8BQ30 594 aa20.46■□□□□ 0.87
Col16a1-201ENSMUST00000044565 Kdm2aP59997 1161 aa20.45■□□□□ 0.86
Col16a1-201ENSMUST00000044565 Dhx57Q6P5D3 1388 aaKnown RBP20.45■□□□□ 0.86
Col16a1-201ENSMUST00000044565 Card11Q8CIS0 1159 aa20.44■□□□□ 0.86
Col16a1-201ENSMUST00000044565 4930567H17RikQ3V0K5 233 aa20.44■□□□□ 0.86
Col16a1-201ENSMUST00000044565 Fyco1Q8VDC1 1437 aa20.44■□□□□ 0.86
Col16a1-201ENSMUST00000044565 Iqgap2Q3UQ44 1575 aa20.44■□□□□ 0.86
Col16a1-201ENSMUST00000044565 CntlnA2AM05 1397 aa20.43■□□□□ 0.86
Col16a1-201ENSMUST00000044565 Rad21Q61550 635 aaKnown RBP20.41■□□□□ 0.86
Col16a1-201ENSMUST00000044565 Grwd1Q810D6 446 aaKnown RBP20.41■□□□□ 0.86
Col16a1-201ENSMUST00000044565 Carmil1Q6EDY6 1374 aa20.41■□□□□ 0.86
Col16a1-201ENSMUST00000044565 Exosc9Q9JHI7 438 aaKnown RBP20.39■□□□□ 0.85
Col16a1-201ENSMUST00000044565 Zfp777B9EKF4 885 aa20.36■□□□□ 0.85
Col16a1-201ENSMUST00000044565 Stk24Q99KH8 431 aa20.35■□□□□ 0.85
Col16a1-201ENSMUST00000044565 LrpprcQ6PB66 1392 aaKnown RBP20.35■□□□□ 0.85
Col16a1-201ENSMUST00000044565 MyclP10166 368 aa20.34■□□□□ 0.85
Col16a1-201ENSMUST00000044565 Lemd3Q9WU40 921 aa20.34■□□□□ 0.85
Col16a1-201ENSMUST00000044565 Map4P27546 1125 aaKnown RBP20.32■□□□□ 0.84
Col16a1-201ENSMUST00000044565 Anks4bQ8K3X6 423 aa20.32■□□□□ 0.84
Col16a1-201ENSMUST00000044565 Calr4Q3TQS0 420 aa20.3■□□□□ 0.84
Col16a1-201ENSMUST00000044565 Arid3cA6PWV5 409 aa20.3■□□□□ 0.84
Col16a1-201ENSMUST00000044565 Stag3O70576 1240 aa20.29■□□□□ 0.84
Col16a1-201ENSMUST00000044565 Arhgap35Q91YM2 1499 aa20.29■□□□□ 0.84
Col16a1-201ENSMUST00000044565 Fgd1P52734 960 aa20.28■□□□□ 0.84
Col16a1-201ENSMUST00000044565 Csrnp3P59055 597 aa20.25■□□□□ 0.83
Col16a1-201ENSMUST00000044565 Rsph4aQ8BYM7 716 aa20.25■□□□□ 0.83
Col16a1-201ENSMUST00000044565 Rangap1P46061 589 aaKnown RBP20.25■□□□□ 0.83
Col16a1-201ENSMUST00000044565 Dhx29Q6PGC1 1365 aaKnown RBP20.24■□□□□ 0.83
Col16a1-201ENSMUST00000044565 Mapk8ip3Q9ESN9 1337 aa20.19■□□□□ 0.82
Col16a1-201ENSMUST00000044565 Pkd2O35245 966 aa20.19■□□□□ 0.82
Col16a1-201ENSMUST00000044565 Iqcf3Q9D498 203 aa20.17■□□□□ 0.82
Col16a1-201ENSMUST00000044565 Plekhh2Q8C115 1491 aa20.15■□□□□ 0.82
Col16a1-201ENSMUST00000044565 Rapgef2Q8CHG7 1496 aa20.14■□□□□ 0.81
Col16a1-201ENSMUST00000044565 DaxxO35613 739 aa20.14■□□□□ 0.81
Col16a1-201ENSMUST00000044565 Cabp1Q9JLK7 227 aa20.14■□□□□ 0.81
Col16a1-201ENSMUST00000044565 Ofd1Q80Z25 1017 aa20.13■□□□□ 0.81
Col16a1-201ENSMUST00000044565 Fhad1A6PWD2 1420 aa20.11■□□□□ 0.81
Col16a1-201ENSMUST00000044565 Ppp4r2Q0VGB7 417 aa20.1■□□□□ 0.81
Col16a1-201ENSMUST00000044565 Wdr43Q6ZQL4 677 aaKnown RBP20.1■□□□□ 0.81
Col16a1-201ENSMUST00000044565 Hspa5P20029 655 aaKnown RBP20.09■□□□□ 0.81
Col16a1-201ENSMUST00000044565 Trim26Q99PN3 545 aa20.09■□□□□ 0.81
Col16a1-201ENSMUST00000044565 NgefQ8CHT1 710 aa20.08■□□□□ 0.8
Col16a1-201ENSMUST00000044565 Arid4bA2CG63 1314 aaKnown RBP20.07■□□□□ 0.8
Col16a1-201ENSMUST00000044565 Aebp2Q9Z248 504 aaKnown RBP20.07■□□□□ 0.8
Col16a1-201ENSMUST00000044565 ArxO35085 564 aa20.07■□□□□ 0.8
Col16a1-201ENSMUST00000044565 Mphosph9A6H5Y1 991 aa20.07■□□□□ 0.8
Col16a1-201ENSMUST00000044565 Trak1Q6PD31 939 aa20.07■□□□□ 0.8
Col16a1-201ENSMUST00000044565 Nup155Q99P88 1391 aaKnown RBP20.06■□□□□ 0.8
Col16a1-201ENSMUST00000044565 Pabpn1Q8CCS6 302 aaKnown RBP20.06■□□□□ 0.8
Col16a1-201ENSMUST00000044565 Chmp4bQ9D8B3 224 aaKnown RBP20.06■□□□□ 0.8
Col16a1-201ENSMUST00000044565 Gtf2e1Q9D0D5 440 aa20.05■□□□□ 0.8
Col16a1-201ENSMUST00000044565 NudcO35685 332 aaKnown RBP20.05■□□□□ 0.8
Col16a1-201ENSMUST00000044565 UacaQ8CGB3 1411 aa20.04■□□□□ 0.8
Col16a1-201ENSMUST00000044565 Ncoa2Q61026 1462 aa20.02■□□□□ 0.8
Col16a1-201ENSMUST00000044565 Aplp2Q06335 707 aa20.01■□□□□ 0.79
Col16a1-201ENSMUST00000044565 Rundc1Q0VDN7 615 aa20.01■□□□□ 0.79
Col16a1-201ENSMUST00000044565 Kif3bQ61771 747 aa20.01■□□□□ 0.79
Col16a1-201ENSMUST00000044565 Ifit1bl1D3Z6F0 470 aa20.01■□□□□ 0.79
Col16a1-201ENSMUST00000044565 Ccnb3Q810T2 1396 aa20.01■□□□□ 0.79
Col16a1-201ENSMUST00000044565 Efcab5A0JP43 1406 aa20■□□□□ 0.79
Col16a1-201ENSMUST00000044565 Sart1Q9Z315 806 aaKnown RBP19.99■□□□□ 0.79
Col16a1-201ENSMUST00000044565 WrnO09053 1401 aa19.98■□□□□ 0.79
Col16a1-201ENSMUST00000044565 Irx6Q9ER75 438 aa19.98■□□□□ 0.79
Col16a1-201ENSMUST00000044565 Soga1E1U8D0 1418 aa19.97■□□□□ 0.79
Col16a1-201ENSMUST00000044565 Psme1P97371 249 aa19.97■□□□□ 0.79
Col16a1-201ENSMUST00000044565 BicraF8VPZ9 1578 aa19.96■□□□□ 0.79
Col16a1-201ENSMUST00000044565 Polr1aO35134 1717 aaKnown RBP19.95■□□□□ 0.78
Col16a1-201ENSMUST00000044565 Stard8Q8K031 1019 aa19.95■□□□□ 0.78
Col16a1-201ENSMUST00000044565 Cnga1P29974 684 aa19.94■□□□□ 0.78
Retrieved 100 of 22,080 RNA–protein pairs in 28.6 ms