RNA–Protein interactions for RNA: ENSMUST00000042012.6

Sf3b3-201, Transcript of Splicing factor 3B subunit 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sf3b3, Length 4,525 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b3-201ENSMUST00000042012 Dhx29Q6PGC1 1365 aaKnown RBP12.69□□□□□ -0.38
Sf3b3-201ENSMUST00000042012 Eid3Q3V124 375 aa12.69□□□□□ -0.38
Sf3b3-201ENSMUST00000042012 Kif27Q7M6Z4 1394 aa12.68□□□□□ -0.38
Sf3b3-201ENSMUST00000042012 Fmn1Q05860 1466 aa12.67□□□□□ -0.38
Sf3b3-201ENSMUST00000042012 Rpap1Q80TE0 1409 aa12.67□□□□□ -0.38
Sf3b3-201ENSMUST00000042012 Ggt6Q6PDE7 497 aa12.66□□□□□ -0.38
Sf3b3-201ENSMUST00000042012 Mtus2Q3UHD3 1353 aa12.66□□□□□ -0.38
Sf3b3-201ENSMUST00000042012 NeflP08551 543 aa12.65□□□□□ -0.38
Sf3b3-201ENSMUST00000042012 IqubQ8CDK3 788 aa12.64□□□□□ -0.39
Sf3b3-201ENSMUST00000042012 Rsph4aQ8BYM7 716 aa12.63□□□□□ -0.39
Sf3b3-201ENSMUST00000042012 Baz1bQ9Z277 1479 aa12.63□□□□□ -0.39
Sf3b3-201ENSMUST00000042012 Arid4bA2CG63 1314 aaKnown RBP12.63□□□□□ -0.39
Sf3b3-201ENSMUST00000042012 Mroh3A0A1D5RM54 893 aa12.6□□□□□ -0.39
Sf3b3-201ENSMUST00000042012 Soga1E1U8D0 1418 aa12.6□□□□□ -0.39
Sf3b3-201ENSMUST00000042012 Srpk2O54781 681 aaKnown RBP12.59□□□□□ -0.39
Sf3b3-201ENSMUST00000042012 Iqgap2Q3UQ44 1575 aa12.59□□□□□ -0.39
Sf3b3-201ENSMUST00000042012 Stk24Q99KH8 431 aa12.58□□□□□ -0.4
Sf3b3-201ENSMUST00000042012 Kdm2aP59997 1161 aa12.57□□□□□ -0.4
Sf3b3-201ENSMUST00000042012 Aebp1Q640N1 1128 aa12.56□□□□□ -0.4
Sf3b3-201ENSMUST00000042012 Mrc2Q64449 1479 aa12.55□□□□□ -0.4
Sf3b3-201ENSMUST00000042012 Rgl3Q3UYI5 709 aa12.54□□□□□ -0.4
Sf3b3-201ENSMUST00000042012 Ppargc1bQ8VHJ7 1014 aa12.54□□□□□ -0.4
Sf3b3-201ENSMUST00000042012 Smarca2Q6DIC0 1577 aa12.53□□□□□ -0.4
Sf3b3-201ENSMUST00000042012 NgefQ8CHT1 710 aa12.53□□□□□ -0.4
Sf3b3-201ENSMUST00000042012 Dhx57Q6P5D3 1388 aaKnown RBP12.53□□□□□ -0.4
Sf3b3-201ENSMUST00000042012 Eif5bQ05D44 1216 aaKnown RBP12.52□□□□□ -0.4
Sf3b3-201ENSMUST00000042012 Gm20521D3Z5F7 333 aa12.52□□□□□ -0.41
Sf3b3-201ENSMUST00000042012 Txndc2Q6P902 515 aa12.5□□□□□ -0.41
Sf3b3-201ENSMUST00000042012 Exosc9Q9JHI7 438 aaKnown RBP12.5□□□□□ -0.41
Sf3b3-201ENSMUST00000042012 Urb2E9Q7L1 1524 aaKnown RBP12.5□□□□□ -0.41
Sf3b3-201ENSMUST00000042012 Jph4Q80WT0 628 aa12.49□□□□□ -0.41
Sf3b3-201ENSMUST00000042012 Carmil1Q6EDY6 1374 aa12.48□□□□□ -0.41
Sf3b3-201ENSMUST00000042012 HdgfP51859 237 aaKnown RBP12.47□□□□□ -0.41
Sf3b3-201ENSMUST00000042012 Psme1P97371 249 aa12.47□□□□□ -0.41
Sf3b3-201ENSMUST00000042012 Kif3bQ61771 747 aa12.46□□□□□ -0.41
Sf3b3-201ENSMUST00000042012 Dnajc5bQ9CQ94 199 aa12.46□□□□□ -0.41
Sf3b3-201ENSMUST00000042012 Polr3glQ8R0C0 218 aa12.45□□□□□ -0.42
Sf3b3-201ENSMUST00000042012 Synj1Q8CHC4 1574 aa12.44□□□□□ -0.42
Sf3b3-201ENSMUST00000042012 Map4P27546 1125 aaKnown RBP12.44□□□□□ -0.42
Sf3b3-201ENSMUST00000042012 Cttnbp2B9EJA2 1648 aa12.43□□□□□ -0.42
Sf3b3-201ENSMUST00000042012 Cyb5rlB1AS42 316 aa12.42□□□□□ -0.42
Sf3b3-201ENSMUST00000042012 Stag3O70576 1240 aa12.42□□□□□ -0.42
Sf3b3-201ENSMUST00000042012 Grwd1Q810D6 446 aaKnown RBP12.41□□□□□ -0.42
Sf3b3-201ENSMUST00000042012 Fgd6Q69ZL1 1399 aa12.41□□□□□ -0.42
Sf3b3-201ENSMUST00000042012 Sart1Q9Z315 806 aaKnown RBP12.41□□□□□ -0.42
Sf3b3-201ENSMUST00000042012 Ccdc88bQ4QRL3 1481 aa12.4□□□□□ -0.42
Sf3b3-201ENSMUST00000042012 WrnO09053 1401 aa12.39□□□□□ -0.43
Sf3b3-201ENSMUST00000042012 Zfp777B9EKF4 885 aa12.39□□□□□ -0.43
Sf3b3-201ENSMUST00000042012 Bcl11bQ99PV8 884 aa12.39□□□□□ -0.43
Sf3b3-201ENSMUST00000042012 Cep162Q6ZQ06 1403 aa12.37□□□□□ -0.43
Sf3b3-201ENSMUST00000042012 Nop58Q6DFW4 536 aaKnown RBP12.35□□□□□ -0.43
Sf3b3-201ENSMUST00000042012 Efcab5A0JP43 1406 aa12.34□□□□□ -0.43
Sf3b3-201ENSMUST00000042012 CntlnA2AM05 1397 aa12.34□□□□□ -0.43
Sf3b3-201ENSMUST00000042012 Ecm2Q5FW85 670 aa12.33□□□□□ -0.44
Sf3b3-201ENSMUST00000042012 Pip4k2bQ80XI4 416 aa12.33□□□□□ -0.44
Sf3b3-201ENSMUST00000042012 Mia2Q91ZV0 1396 aa12.33□□□□□ -0.44
Sf3b3-201ENSMUST00000042012 Shroom4Q1W617 1475 aa12.33□□□□□ -0.44
Sf3b3-201ENSMUST00000042012 Stk26Q99JT2 416 aa12.32□□□□□ -0.44
Sf3b3-201ENSMUST00000042012 Cabp1Q9JLK7 227 aa12.31□□□□□ -0.44
Sf3b3-201ENSMUST00000042012 Frmpd1A2AKB4 1549 aa12.31□□□□□ -0.44
Sf3b3-201ENSMUST00000042012 Aplp2Q06335 707 aa12.3□□□□□ -0.44
Sf3b3-201ENSMUST00000042012 Irx6Q9ER75 438 aa12.3□□□□□ -0.44
Sf3b3-201ENSMUST00000042012 Mapk8ip2Q9ERE9 830 aa12.3□□□□□ -0.44
Sf3b3-201ENSMUST00000042012 CadpsQ80TJ1 1355 aa12.3□□□□□ -0.44
Sf3b3-201ENSMUST00000042012 Fyco1Q8VDC1 1437 aa12.29□□□□□ -0.44
Sf3b3-201ENSMUST00000042012 Tnnt3Q9QZ47 272 aa12.28□□□□□ -0.44
Sf3b3-201ENSMUST00000042012 Card11Q8CIS0 1159 aa12.28□□□□□ -0.44
Sf3b3-201ENSMUST00000042012 Cc2d2bA0A286YDU8 1405 aa12.28□□□□□ -0.44
Sf3b3-201ENSMUST00000042012 Cc2d2aQ8CFW7 1633 aa12.27□□□□□ -0.44
Sf3b3-201ENSMUST00000042012 Rangap1P46061 589 aaKnown RBP12.27□□□□□ -0.44
Sf3b3-201ENSMUST00000042012 Sox12Q04890 314 aa12.27□□□□□ -0.45
Sf3b3-201ENSMUST00000042012 Ift140E9PY46 1464 aa12.26□□□□□ -0.45
Sf3b3-201ENSMUST00000042012 Ncoa2Q61026 1462 aa12.26□□□□□ -0.45
Sf3b3-201ENSMUST00000042012 Trak1Q6PD31 939 aa12.25□□□□□ -0.45
Sf3b3-201ENSMUST00000042012 Gm14025A2AP89 1413 aa12.24□□□□□ -0.45
Sf3b3-201ENSMUST00000042012 Fbln2P37889 1221 aa12.24□□□□□ -0.45
Sf3b3-201ENSMUST00000042012 Duox2A2AQ99 1517 aa12.24□□□□□ -0.45
Sf3b3-201ENSMUST00000042012 Rad54l2Q99NG0 1466 aa12.24□□□□□ -0.45
Sf3b3-201ENSMUST00000042012 Ccnb3Q810T2 1396 aa12.23□□□□□ -0.45
Sf3b3-201ENSMUST00000042012 Iqcf3Q9D498 203 aa12.23□□□□□ -0.45
Sf3b3-201ENSMUST00000042012 ClspnQ80YR7 1315 aa12.22□□□□□ -0.45
Sf3b3-201ENSMUST00000042012 Ap3b2Q9JME5 1082 aa12.21□□□□□ -0.45
Sf3b3-201ENSMUST00000042012 Plb1Q3TTY0 1478 aa12.21□□□□□ -0.46
Sf3b3-201ENSMUST00000042012 Utp14aQ640M1 767 aaKnown RBP12.2□□□□□ -0.46
Sf3b3-201ENSMUST00000042012 Q8BT18 775 aa12.2□□□□□ -0.46
Sf3b3-201ENSMUST00000042012 PogzQ8BZH4 1409 aaKnown RBP12.2□□□□□ -0.46
Sf3b3-201ENSMUST00000042012 Plekhh2Q8C115 1491 aa12.2□□□□□ -0.46
Sf3b3-201ENSMUST00000042012 Pkd2O35245 966 aa12.19□□□□□ -0.46
Sf3b3-201ENSMUST00000042012 Gtf2e1Q9D0D5 440 aa12.19□□□□□ -0.46
Sf3b3-201ENSMUST00000042012 Cnga1P29974 684 aa12.19□□□□□ -0.46
Sf3b3-201ENSMUST00000042012 Spag9Q58A65 1321 aaKnown RBP12.19□□□□□ -0.46
Sf3b3-201ENSMUST00000042012 Ifit1bl1D3Z6F0 470 aa12.19□□□□□ -0.46
Sf3b3-201ENSMUST00000042012 Cwc22Q8C5N3 908 aaKnown RBP12.19□□□□□ -0.46
Sf3b3-201ENSMUST00000042012 Nup155Q99P88 1391 aaKnown RBP12.19□□□□□ -0.46
Sf3b3-201ENSMUST00000042012 Fgd1P52734 960 aa12.18□□□□□ -0.46
Sf3b3-201ENSMUST00000042012 Mapk8ip3Q9ESN9 1337 aa12.17□□□□□ -0.46
Sf3b3-201ENSMUST00000042012 Tdrd9Q14BI7 1383 aa12.17□□□□□ -0.46
Sf3b3-201ENSMUST00000042012 BicraF8VPZ9 1578 aa12.16□□□□□ -0.46
Sf3b3-201ENSMUST00000042012 Rad21Q61550 635 aaKnown RBP12.15□□□□□ -0.46
Sf3b3-201ENSMUST00000042012 Ppm1fQ8CGA0 452 aa12.15□□□□□ -0.46
Retrieved 100 of 22,080 RNA–protein pairs in 42.4 ms