RNA–Protein interactions for RNA: ENSMUST00000042012.6

Sf3b3-201, Transcript of Splicing factor 3B subunit 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sf3b3, Length 4,525 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b3-201ENSMUST00000042012 Rhox8Q6VSS7 320 aa17■□□□□ 0.31
Sf3b3-201ENSMUST00000042012 NischQ80TM9 1593 aa15.49■□□□□ 0.07
Sf3b3-201ENSMUST00000042012 Esf1Q3V1V3 845 aaKnown RBP15.37■□□□□ 0.05
Sf3b3-201ENSMUST00000042012 Ccdc136Q3TVA9 1136 aa15.14■□□□□ 0.01
Sf3b3-201ENSMUST00000042012 Abcc9P70170 1546 aa15.07■□□□□ 0
Sf3b3-201ENSMUST00000042012 Cngb1E1AZ71 1325 aa15.02■□□□□ -0
Sf3b3-201ENSMUST00000042012 Zeb1Q64318 1117 aa14.98□□□□□ -0.01
Sf3b3-201ENSMUST00000042012 Trim41Q5NCC3 630 aa14.95□□□□□ -0.02
Sf3b3-201ENSMUST00000042012 Npm2Q80W85 207 aa14.75□□□□□ -0.05
Sf3b3-201ENSMUST00000042012 Gm35339A0A140LHH9 1649 aa14.73□□□□□ -0.05
Sf3b3-201ENSMUST00000042012 Il27Q8K3I6 234 aa14.56□□□□□ -0.08
Sf3b3-201ENSMUST00000042012 Gab3Q8BSM5 595 aa14.54□□□□□ -0.08
Sf3b3-201ENSMUST00000042012 Ube2uB1AUC4 352 aa14.5□□□□□ -0.09
Sf3b3-201ENSMUST00000042012 Myt1lP97500 1187 aa14.47□□□□□ -0.09
Sf3b3-201ENSMUST00000042012 Zcchc6Q5BLK4 1491 aaKnown RBP14.43□□□□□ -0.1
Sf3b3-201ENSMUST00000042012 Abcc8B2RUS7 1588 aa14.26□□□□□ -0.13
Sf3b3-201ENSMUST00000042012 Npm1Q61937 292 aaKnown RBP14.24□□□□□ -0.13
Sf3b3-201ENSMUST00000042012 Ehmt2Q9Z148 1263 aaKnown RBP14.06□□□□□ -0.16
Sf3b3-201ENSMUST00000042012 Ubl4bQ9CQ84 188 aa14□□□□□ -0.17
Sf3b3-201ENSMUST00000042012 Ttbk1Q6PCN3 1308 aa13.91□□□□□ -0.18
Sf3b3-201ENSMUST00000042012 Pelp1Q9DBD5 1123 aaKnown RBP13.87□□□□□ -0.19
Sf3b3-201ENSMUST00000042012 Ifnlr1Q8CGK5 535 aa13.86□□□□□ -0.19
Sf3b3-201ENSMUST00000042012 Las1lA2BE28 776 aaKnown RBP13.82□□□□□ -0.2
Sf3b3-201ENSMUST00000042012 NacadQ5SWP3 1504 aa13.81□□□□□ -0.2
Sf3b3-201ENSMUST00000042012 Ap3b1Q9Z1T1 1105 aa13.76□□□□□ -0.21
Sf3b3-201ENSMUST00000042012 UbtfP25976 765 aaKnown RBP13.73□□□□□ -0.21
Sf3b3-201ENSMUST00000042012 Gm13697A2AK42 830 aa13.71□□□□□ -0.22
Sf3b3-201ENSMUST00000042012 Plppr3Q7TPB0 716 aa13.69□□□□□ -0.22
Sf3b3-201ENSMUST00000042012 Brd4Q9ESU6 1400 aaKnown RBP13.69□□□□□ -0.22
Sf3b3-201ENSMUST00000042012 Wdr66E9Q743 1299 aa13.66□□□□□ -0.22
Sf3b3-201ENSMUST00000042012 HrcG5E8J6 738 aa13.65□□□□□ -0.22
Sf3b3-201ENSMUST00000042012 Ercc6F8VPZ5 1481 aa13.63□□□□□ -0.23
Sf3b3-201ENSMUST00000042012 Fkbp15Q6P9Q6 1216 aaKnown RBP13.63□□□□□ -0.23
Sf3b3-201ENSMUST00000042012 Fam50aQ9WV03 339 aaKnown RBP13.62□□□□□ -0.23
Sf3b3-201ENSMUST00000042012 Rb1cc1Q9ESK9 1588 aa13.59□□□□□ -0.23
Sf3b3-201ENSMUST00000042012 Os9Q8K2C7 672 aa13.59□□□□□ -0.23
Sf3b3-201ENSMUST00000042012 Rpgrip1Q9EPQ2 1331 aa13.58□□□□□ -0.24
Sf3b3-201ENSMUST00000042012 NclP09405 707 aaKnown RBP13.55□□□□□ -0.24
Sf3b3-201ENSMUST00000042012 Hnrnpul2Q00PI9 745 aaKnown RBP13.5□□□□□ -0.25
Sf3b3-201ENSMUST00000042012 Zbtb7cQ8VCZ7 619 aa13.49□□□□□ -0.25
Sf3b3-201ENSMUST00000042012 Lmod2Q3UHZ5 550 aa13.48□□□□□ -0.25
Sf3b3-201ENSMUST00000042012 Pds5bQ4VA53 1446 aaKnown RBP13.46□□□□□ -0.25
Sf3b3-201ENSMUST00000042012 Ccdc180J3QNE4 1664 aa13.44□□□□□ -0.26
Sf3b3-201ENSMUST00000042012 Rsf1E9PWW9 1441 aaKnown RBP13.43□□□□□ -0.26
Sf3b3-201ENSMUST00000042012 Kif15Q6P9L6 1387 aa13.42□□□□□ -0.26
Sf3b3-201ENSMUST00000042012 Safb2Q80YR5 991 aaKnown RBP13.41□□□□□ -0.26
Sf3b3-201ENSMUST00000042012 Gm13695A2AK44 830 aa13.4□□□□□ -0.27
Sf3b3-201ENSMUST00000042012 Neurod1Q60867 357 aa13.36□□□□□ -0.27
Sf3b3-201ENSMUST00000042012 Kdm5dQ62240 1548 aa13.35□□□□□ -0.27
Sf3b3-201ENSMUST00000042012 Rtl1Q7M732 1744 aa13.35□□□□□ -0.27
Sf3b3-201ENSMUST00000042012 Slc24a1Q91WD8 1130 aa13.34□□□□□ -0.27
Sf3b3-201ENSMUST00000042012 Atp1b4Q99ME6 356 aa13.31□□□□□ -0.28
Sf3b3-201ENSMUST00000042012 Cep164Q5DU05 1446 aa13.29□□□□□ -0.28
Sf3b3-201ENSMUST00000042012 Erich6D3Z6S9 713 aa13.27□□□□□ -0.29
Sf3b3-201ENSMUST00000042012 Ccdc18Q640L5 1455 aa13.26□□□□□ -0.29
Sf3b3-201ENSMUST00000042012 Baz1aO88379 1555 aa13.26□□□□□ -0.29
Sf3b3-201ENSMUST00000042012 NefmP08553 848 aa13.26□□□□□ -0.29
Sf3b3-201ENSMUST00000042012 Anp32bQ9EST5 272 aaKnown RBP13.25□□□□□ -0.29
Sf3b3-201ENSMUST00000042012 Hdac5Q9Z2V6 1113 aa13.22□□□□□ -0.29
Sf3b3-201ENSMUST00000042012 Plekhg3Q4VAC9 1341 aa13.19□□□□□ -0.3
Sf3b3-201ENSMUST00000042012 Cdk11bP24788 784 aaKnown RBP13.18□□□□□ -0.3
Sf3b3-201ENSMUST00000042012 Arhgap27A2AB59 869 aa13.15□□□□□ -0.3
Sf3b3-201ENSMUST00000042012 Ppp1r18Q8BQ30 594 aa13.15□□□□□ -0.3
Sf3b3-201ENSMUST00000042012 Sycp2Q9CUU3 1500 aa13.13□□□□□ -0.31
Sf3b3-201ENSMUST00000042012 Dcaf1Q80TR8 1506 aa13.12□□□□□ -0.31
Sf3b3-201ENSMUST00000042012 Chic1Q8CBW7 227 aa13.11□□□□□ -0.31
Sf3b3-201ENSMUST00000042012 Phldb1Q6PDH0 1371 aaKnown RBP13.1□□□□□ -0.31
Sf3b3-201ENSMUST00000042012 MyclP10166 368 aa13.09□□□□□ -0.31
Sf3b3-201ENSMUST00000042012 Clip1Q922J3 1391 aa13.08□□□□□ -0.32
Sf3b3-201ENSMUST00000042012 Clstn2Q9ER65 966 aa13.03□□□□□ -0.32
Sf3b3-201ENSMUST00000042012 Atad2bE9Q166 1460 aaKnown RBP13.02□□□□□ -0.33
Sf3b3-201ENSMUST00000042012 Stra8P70278 393 aa13.01□□□□□ -0.33
Sf3b3-201ENSMUST00000042012 Golga3P55937 1487 aa12.98□□□□□ -0.33
Sf3b3-201ENSMUST00000042012 Pabpn1Q8CCS6 302 aaKnown RBP12.98□□□□□ -0.33
Sf3b3-201ENSMUST00000042012 AknaQ80VW7 1404 aa12.98□□□□□ -0.33
Sf3b3-201ENSMUST00000042012 NrdcQ8BHG1 1161 aa12.97□□□□□ -0.33
Sf3b3-201ENSMUST00000042012 Cux2P70298 1426 aa12.96□□□□□ -0.34
Sf3b3-201ENSMUST00000042012 P3h3Q8CG70 732 aa12.96□□□□□ -0.34
Sf3b3-201ENSMUST00000042012 Arid3cA6PWV5 409 aa12.94□□□□□ -0.34
Sf3b3-201ENSMUST00000042012 MlecQ6ZQI3 291 aaKnown RBP12.93□□□□□ -0.34
Sf3b3-201ENSMUST00000042012 Zbtb4Q5F293 982 aa12.92□□□□□ -0.34
Sf3b3-201ENSMUST00000042012 Setd5Q5XJV7 1441 aa12.92□□□□□ -0.34
Sf3b3-201ENSMUST00000042012 BlmO88700 1416 aa12.9□□□□□ -0.34
Sf3b3-201ENSMUST00000042012 Chic2Q9D9G3 165 aa12.89□□□□□ -0.35
Sf3b3-201ENSMUST00000042012 Ccer2J3QPU5 274 aa12.84□□□□□ -0.35
Sf3b3-201ENSMUST00000042012 Prdm10Q3UTQ7 1184 aa12.83□□□□□ -0.36
Sf3b3-201ENSMUST00000042012 ScribQ80U72 1612 aa12.82□□□□□ -0.36
Sf3b3-201ENSMUST00000042012 TonslQ6NZL6 1363 aa12.82□□□□□ -0.36
Sf3b3-201ENSMUST00000042012 Acin1Q9JIX8 1338 aaKnown RBP12.81□□□□□ -0.36
Sf3b3-201ENSMUST00000042012 Crybg2B7ZCC2 1516 aa12.8□□□□□ -0.36
Sf3b3-201ENSMUST00000042012 DiexfQ8BTT6 772 aaKnown RBP12.78□□□□□ -0.36
Sf3b3-201ENSMUST00000042012 Rrp7aQ9D1C9 280 aaKnown RBP12.76□□□□□ -0.37
Sf3b3-201ENSMUST00000042012 Lemd3Q9WU40 921 aa12.75□□□□□ -0.37
Sf3b3-201ENSMUST00000042012 Nlrp6Q91WS2 869 aa12.73□□□□□ -0.37
Sf3b3-201ENSMUST00000042012 Cecr2E9Q2Z1 1453 aa12.72□□□□□ -0.37
Sf3b3-201ENSMUST00000042012 Mier1Q5UAK0 511 aa12.71□□□□□ -0.37
Sf3b3-201ENSMUST00000042012 Smarca4Q3TKT4 1613 aaKnown RBP12.71□□□□□ -0.38
Sf3b3-201ENSMUST00000042012 CftrP26361 1476 aa12.7□□□□□ -0.38
Sf3b3-201ENSMUST00000042012 Eea1Q8BL66 1411 aa12.7□□□□□ -0.38
Sf3b3-201ENSMUST00000042012 LrpprcQ6PB66 1392 aaKnown RBP12.7□□□□□ -0.38
Retrieved 100 of 22,080 RNA–protein pairs in 43.6 ms