RNA–Protein interactions for RNA: ENSMUST00000040783.10

Usp40-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Usp40, Length 5,049 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40-201ENSMUST00000040783 Arhgap27A2AB59 869 aa10.31□□□□□ -0.76
Usp40-201ENSMUST00000040783 Prdm10Q3UTQ7 1184 aa10.28□□□□□ -0.76
Usp40-201ENSMUST00000040783 ClspnQ80YR7 1315 aa10.23□□□□□ -0.77
Usp40-201ENSMUST00000040783 Sycp2Q9CUU3 1500 aa10.22□□□□□ -0.77
Usp40-201ENSMUST00000040783 Ccdc9Q8VC31 543 aaKnown RBP10.2□□□□□ -0.78
Usp40-201ENSMUST00000040783 PrkcshO08795 521 aa10.2□□□□□ -0.78
Usp40-201ENSMUST00000040783 Anp32aO35381 247 aa10.19□□□□□ -0.78
Usp40-201ENSMUST00000040783 P3h3Q8CG70 732 aa10.19□□□□□ -0.78
Usp40-201ENSMUST00000040783 Eea1Q8BL66 1411 aa10.19□□□□□ -0.78
Usp40-201ENSMUST00000040783 Pknox2Q8BG99 474 aa10.18□□□□□ -0.78
Usp40-201ENSMUST00000040783 CatipB9EKE5 520 aa10.14□□□□□ -0.79
Usp40-201ENSMUST00000040783 Mapk8ip2Q9ERE9 830 aa10.14□□□□□ -0.79
Usp40-201ENSMUST00000040783 Polr3glQ8R0C0 218 aa10.13□□□□□ -0.79
Usp40-201ENSMUST00000040783 Fam71e1A1L3C1 212 aa10.12□□□□□ -0.79
Usp40-201ENSMUST00000040783 Phldb1Q6PDH0 1371 aaKnown RBP10.12□□□□□ -0.79
Usp40-201ENSMUST00000040783 Ppp1r18Q8BQ30 594 aa10.11□□□□□ -0.79
Usp40-201ENSMUST00000040783 DaxxO35613 739 aa10.1□□□□□ -0.79
Usp40-201ENSMUST00000040783 Rrp7aQ9D1C9 280 aaKnown RBP10.1□□□□□ -0.79
Usp40-201ENSMUST00000040783 Crybg2B7ZCC2 1516 aa10.1□□□□□ -0.79
Usp40-201ENSMUST00000040783 MyclP10166 368 aa10.09□□□□□ -0.79
Usp40-201ENSMUST00000040783 Rgl3Q3UYI5 709 aa10.08□□□□□ -0.8
Usp40-201ENSMUST00000040783 Mtus2Q3UHD3 1353 aa10.08□□□□□ -0.8
Usp40-201ENSMUST00000040783 Cux2P70298 1426 aa10.08□□□□□ -0.8
Usp40-201ENSMUST00000040783 Atad2bE9Q166 1460 aaKnown RBP10.08□□□□□ -0.8
Usp40-201ENSMUST00000040783 IqubQ8CDK3 788 aa10.08□□□□□ -0.8
Usp40-201ENSMUST00000040783 Fmn1Q05860 1466 aa10.07□□□□□ -0.8
Usp40-201ENSMUST00000040783 AknaQ80VW7 1404 aa10.07□□□□□ -0.8
Usp40-201ENSMUST00000040783 Aebp2Q9Z248 504 aaKnown RBP10.06□□□□□ -0.8
Usp40-201ENSMUST00000040783 Mroh3A0A1D5RM54 893 aa10.05□□□□□ -0.8
Usp40-201ENSMUST00000040783 Srpk2O54781 681 aaKnown RBP10.05□□□□□ -0.8
Usp40-201ENSMUST00000040783 Kif27Q7M6Z4 1394 aa10.04□□□□□ -0.8
Usp40-201ENSMUST00000040783 Kdm2aP59997 1161 aa10.04□□□□□ -0.8
Usp40-201ENSMUST00000040783 BccipQ9CWI3 316 aa10.02□□□□□ -0.8
Usp40-201ENSMUST00000040783 Arid3cA6PWV5 409 aa10.02□□□□□ -0.81
Usp40-201ENSMUST00000040783 CftrP26361 1476 aa10.01□□□□□ -0.81
Usp40-201ENSMUST00000040783 Gm20521D3Z5F7 333 aa10□□□□□ -0.81
Usp40-201ENSMUST00000040783 Rpap1Q80TE0 1409 aa9.98□□□□□ -0.81
Usp40-201ENSMUST00000040783 Aebp1Q640N1 1128 aa9.98□□□□□ -0.81
Usp40-201ENSMUST00000040783 Grwd1Q810D6 446 aaKnown RBP9.98□□□□□ -0.81
Usp40-201ENSMUST00000040783 Stk24Q99KH8 431 aa9.98□□□□□ -0.81
Usp40-201ENSMUST00000040783 Upf2A2AT37 1269 aaKnown RBP9.98□□□□□ -0.81
Usp40-201ENSMUST00000040783 Exosc9Q9JHI7 438 aaKnown RBP9.97□□□□□ -0.81
Usp40-201ENSMUST00000040783 Mia2Q91ZV0 1396 aa9.97□□□□□ -0.81
Usp40-201ENSMUST00000040783 Lemd3Q9WU40 921 aa9.97□□□□□ -0.81
Usp40-201ENSMUST00000040783 SafbD3YXK2 937 aaKnown RBP9.96□□□□□ -0.81
Usp40-201ENSMUST00000040783 Cecr2E9Q2Z1 1453 aa9.96□□□□□ -0.81
Usp40-201ENSMUST00000040783 Hsp90aa1P07901 733 aaKnown RBP9.96□□□□□ -0.82
Usp40-201ENSMUST00000040783 Ccdc88bQ4QRL3 1481 aa9.96□□□□□ -0.82
Usp40-201ENSMUST00000040783 Baz1bQ9Z277 1479 aa9.96□□□□□ -0.82
Usp40-201ENSMUST00000040783 Irx3P81067 507 aa9.95□□□□□ -0.82
Usp40-201ENSMUST00000040783 Mrs2Q5NCE8 434 aa9.95□□□□□ -0.82
Usp40-201ENSMUST00000040783 Rangap1P46061 589 aaKnown RBP9.95□□□□□ -0.82
Usp40-201ENSMUST00000040783 Rad21Q61550 635 aaKnown RBP9.95□□□□□ -0.82
Usp40-201ENSMUST00000040783 Cep162Q6ZQ06 1403 aa9.95□□□□□ -0.82
Usp40-201ENSMUST00000040783 ScribQ80U72 1612 aa9.94□□□□□ -0.82
Usp40-201ENSMUST00000040783 Card11Q8CIS0 1159 aa9.94□□□□□ -0.82
Usp40-201ENSMUST00000040783 Smarca4Q3TKT4 1613 aaKnown RBP9.94□□□□□ -0.82
Usp40-201ENSMUST00000040783 Znf326O88291 580 aa9.93□□□□□ -0.82
Usp40-201ENSMUST00000040783 Znf316Q6PGE4 1016 aa9.93□□□□□ -0.82
Usp40-201ENSMUST00000040783 Q8BT18 775 aa9.93□□□□□ -0.82
Usp40-201ENSMUST00000040783 Stag3O70576 1240 aa9.92□□□□□ -0.82
Usp40-201ENSMUST00000040783 Cwc22Q8C5N3 908 aaKnown RBP9.92□□□□□ -0.82
Usp40-201ENSMUST00000040783 LrpprcQ6PB66 1392 aaKnown RBP9.91□□□□□ -0.82
Usp40-201ENSMUST00000040783 Map4P27546 1125 aaKnown RBP9.91□□□□□ -0.82
Usp40-201ENSMUST00000040783 Dhx57Q6P5D3 1388 aaKnown RBP9.91□□□□□ -0.82
Usp40-201ENSMUST00000040783 Pabpn1Q8CCS6 302 aaKnown RBP9.9□□□□□ -0.82
Usp40-201ENSMUST00000040783 NgefQ8CHT1 710 aa9.9□□□□□ -0.82
Usp40-201ENSMUST00000040783 Carmil1Q6EDY6 1374 aa9.88□□□□□ -0.83
Usp40-201ENSMUST00000040783 Smarca2Q6DIC0 1577 aa9.88□□□□□ -0.83
Usp40-201ENSMUST00000040783 Zfp777B9EKF4 885 aa9.88□□□□□ -0.83
Usp40-201ENSMUST00000040783 Fgd1P52734 960 aa9.88□□□□□ -0.83
Usp40-201ENSMUST00000040783 CntlnA2AM05 1397 aa9.88□□□□□ -0.83
Usp40-201ENSMUST00000040783 MlecQ6ZQI3 291 aaKnown RBP9.88□□□□□ -0.83
Usp40-201ENSMUST00000040783 Rsph4aQ8BYM7 716 aa9.87□□□□□ -0.83
Usp40-201ENSMUST00000040783 Dhx29Q6PGC1 1365 aaKnown RBP9.87□□□□□ -0.83
Usp40-201ENSMUST00000040783 Gtf3c5Q8R2T8 520 aa9.87□□□□□ -0.83
Usp40-201ENSMUST00000040783 Synj1Q8CHC4 1574 aa9.87□□□□□ -0.83
Usp40-201ENSMUST00000040783 Podxl2Q8CAE9 603 aa9.86□□□□□ -0.83
Usp40-201ENSMUST00000040783 Fyco1Q8VDC1 1437 aa9.86□□□□□ -0.83
Usp40-201ENSMUST00000040783 Arid4bA2CG63 1314 aaKnown RBP9.84□□□□□ -0.83
Usp40-201ENSMUST00000040783 Irx6Q9ER75 438 aa9.83□□□□□ -0.84
Usp40-201ENSMUST00000040783 Trim26Q99PN3 545 aa9.83□□□□□ -0.84
Usp40-201ENSMUST00000040783 Cabp1Q9JLK7 227 aa9.82□□□□□ -0.84
Usp40-201ENSMUST00000040783 Mapk8ip3Q9ESN9 1337 aa9.82□□□□□ -0.84
Usp40-201ENSMUST00000040783 Iqgap2Q3UQ44 1575 aa9.82□□□□□ -0.84
Usp40-201ENSMUST00000040783 Pkd2O35245 966 aa9.82□□□□□ -0.84
Usp40-201ENSMUST00000040783 Iqcf3Q9D498 203 aa9.81□□□□□ -0.84
Usp40-201ENSMUST00000040783 Kif3bQ61771 747 aa9.81□□□□□ -0.84
Usp40-201ENSMUST00000040783 Cttnbp2B9EJA2 1648 aa9.81□□□□□ -0.84
Usp40-201ENSMUST00000040783 Psme1P97371 249 aa9.81□□□□□ -0.84
Usp40-201ENSMUST00000040783 Ccdc27Q3V036 639 aa9.8□□□□□ -0.84
Usp40-201ENSMUST00000040783 Trak1Q6PD31 939 aa9.8□□□□□ -0.84
Usp40-201ENSMUST00000040783 Txndc2Q6P902 515 aa9.8□□□□□ -0.84
Usp40-201ENSMUST00000040783 Tnnt2P50752 301 aa9.79□□□□□ -0.84
Usp40-201ENSMUST00000040783 Taok2Q6ZQ29 1240 aa9.79□□□□□ -0.84
Usp40-201ENSMUST00000040783 Gtf3c3Q3TMP1 882 aa9.79□□□□□ -0.84
Usp40-201ENSMUST00000040783 ArxO35085 564 aa9.78□□□□□ -0.84
Usp40-201ENSMUST00000040783 Calr4Q3TQS0 420 aa9.78□□□□□ -0.84
Usp40-201ENSMUST00000040783 Cnga1P29974 684 aa9.78□□□□□ -0.84
Usp40-201ENSMUST00000040783 Sart1Q9Z315 806 aaKnown RBP9.78□□□□□ -0.84
Retrieved 100 of 22,080 RNA–protein pairs in 13.9 ms