RNA–Protein interactions for RNA: ENSMUST00000029549.15

Tpm3-201, Transcript of Tropomyosin alpha-3 chain, mousemouse

TSL 1 (best) BASIC

Gene Tpm3, Length 2,230 nt, Biotype protein coding, Subcellular localisation Exosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm3-201ENSMUST00000029549 Setd5Q5XJV7 1441 aa21.97■■□□□ 1.11
Tpm3-201ENSMUST00000029549 Plekhg3Q4VAC9 1341 aa21.96■■□□□ 1.11
Tpm3-201ENSMUST00000029549 Arhgef5E9Q7D5 1581 aa21.94■■□□□ 1.1
Tpm3-201ENSMUST00000029549 Rusc2Q80U22 1514 aa21.92■■□□□ 1.1
Tpm3-201ENSMUST00000029549 Magi3Q9EQJ9 1476 aa21.92■■□□□ 1.1
Tpm3-201ENSMUST00000029549 Erich3F6QRE9 1637 aa21.88■■□□□ 1.09
Tpm3-201ENSMUST00000029549 Carmil1Q6EDY6 1374 aa21.88■■□□□ 1.09
Tpm3-201ENSMUST00000029549 Ankrd26Q811D2 1581 aa21.87■■□□□ 1.09
Tpm3-201ENSMUST00000029549 Grin2aP35436 1464 aa21.87■■□□□ 1.09
Tpm3-201ENSMUST00000029549 SynmQ70IV5 1561 aa21.87■■□□□ 1.09
Tpm3-201ENSMUST00000029549 Nup160Q9Z0W3 1402 aaKnown RBP21.87■■□□□ 1.09
Tpm3-201ENSMUST00000029549 Pcgf6Q99NA9 353 aa21.84■■□□□ 1.09
Tpm3-201ENSMUST00000029549 Pla2r1Q62028 1487 aa21.84■■□□□ 1.09
Tpm3-201ENSMUST00000029549 Ap3b1Q9Z1T1 1105 aa21.83■■□□□ 1.08
Tpm3-201ENSMUST00000029549 Pbrm1Q8BSQ9 1634 aaKnown RBP21.8■■□□□ 1.08
Tpm3-201ENSMUST00000029549 Tiam1Q60610 1591 aa21.79■■□□□ 1.08
Tpm3-201ENSMUST00000029549 Ncapd3Q6ZQK0 1506 aa21.78■■□□□ 1.08
Tpm3-201ENSMUST00000029549 Cux1P53564 1515 aa21.75■■□□□ 1.07
Tpm3-201ENSMUST00000029549 Naip1Q9QWK5 1403 aa21.73■■□□□ 1.07
Tpm3-201ENSMUST00000029549 Pcf11G3X9Z4 1553 aa21.73■■□□□ 1.07
Tpm3-201ENSMUST00000029549 Cc2d2bA0A286YDU8 1405 aa21.72■■□□□ 1.07
Tpm3-201ENSMUST00000029549 Lmo7E9PYF4 1699 aaKnown RBP21.72■■□□□ 1.07
Tpm3-201ENSMUST00000029549 Polr1aO35134 1717 aaKnown RBP21.69■■□□□ 1.06
Tpm3-201ENSMUST00000029549 Fyco1Q8VDC1 1437 aa21.68■■□□□ 1.06
Tpm3-201ENSMUST00000029549 BlmO88700 1416 aa21.67■■□□□ 1.06
Tpm3-201ENSMUST00000029549 CntlnA2AM05 1397 aa21.66■■□□□ 1.06
Tpm3-201ENSMUST00000029549 Rpap1Q80TE0 1409 aa21.66■■□□□ 1.06
Tpm3-201ENSMUST00000029549 Supt5hO55201 1082 aaKnown RBP21.66■■□□□ 1.06
Tpm3-201ENSMUST00000029549 WizO88286 1684 aaKnown RBP21.64■■□□□ 1.05
Tpm3-201ENSMUST00000029549 Slx4Q6P1D7 1565 aa21.64■■□□□ 1.05
Tpm3-201ENSMUST00000029549 Gpatch8A2A6A1 1505 aa21.61■■□□□ 1.05
Tpm3-201ENSMUST00000029549 Abca16E9PWJ7 1678 aa21.61■■□□□ 1.05
Tpm3-201ENSMUST00000029549 EprsQ8CGC7 1512 aaKnown RBP21.61■■□□□ 1.05
Tpm3-201ENSMUST00000029549 PxdnQ3UQ28 1475 aa21.61■■□□□ 1.05
Tpm3-201ENSMUST00000029549 Peg3Q3URU2 1571 aa21.57■■□□□ 1.04
Tpm3-201ENSMUST00000029549 Shroom2A2ALU4 1481 aa21.56■■□□□ 1.04
Tpm3-201ENSMUST00000029549 Aebp1Q640N1 1128 aa21.55■■□□□ 1.04
Tpm3-201ENSMUST00000029549 Adamts12Q811B3 1600 aa21.55■■□□□ 1.04
Tpm3-201ENSMUST00000029549 Pelp1Q9DBD5 1123 aaKnown RBP21.54■■□□□ 1.04
Tpm3-201ENSMUST00000029549 Abcc2Q8VI47 1543 aa21.54■■□□□ 1.04
Tpm3-201ENSMUST00000029549 TchhA0A0B4J1F9 1599 aa21.52■■□□□ 1.03
Tpm3-201ENSMUST00000029549 Las1lA2BE28 776 aaKnown RBP21.51■■□□□ 1.03
Tpm3-201ENSMUST00000029549 Arhgap27A2AB59 869 aa21.48■■□□□ 1.03
Tpm3-201ENSMUST00000029549 Kdm5bQ80Y84 1544 aa21.48■■□□□ 1.03
Tpm3-201ENSMUST00000029549 AknaQ80VW7 1404 aa21.47■■□□□ 1.03
Tpm3-201ENSMUST00000029549 Lmod2Q3UHZ5 550 aa21.47■■□□□ 1.03
Tpm3-201ENSMUST00000029549 Fgd6Q69ZL1 1399 aa21.46■■□□□ 1.03
Tpm3-201ENSMUST00000029549 CadpsQ80TJ1 1355 aa21.46■■□□□ 1.03
Tpm3-201ENSMUST00000029549 BC005561E9Q5E2 1589 aa21.45■■□□□ 1.03
Tpm3-201ENSMUST00000029549 Pabpn1Q8CCS6 302 aaKnown RBP21.45■■□□□ 1.03
Tpm3-201ENSMUST00000029549 Abca5Q8K448 1642 aa21.44■■□□□ 1.02
Tpm3-201ENSMUST00000029549 Gm7298A0A0N4SVU1 1476 aa21.43■■□□□ 1.02
Tpm3-201ENSMUST00000029549 Gm1043A0A140LJC2 1431 aa21.43■■□□□ 1.02
Tpm3-201ENSMUST00000029549 Dnmt1P13864 1620 aaKnown RBP21.43■■□□□ 1.02
Tpm3-201ENSMUST00000029549 TonslQ6NZL6 1363 aa21.41■■□□□ 1.02
Tpm3-201ENSMUST00000029549 Neo1P97798 1493 aa21.39■■□□□ 1.01
Tpm3-201ENSMUST00000029549 Map3k4O08648 1597 aa21.37■■□□□ 1.01
Tpm3-201ENSMUST00000029549 3425401B19RikD3Z1D3 1412 aa21.36■■□□□ 1.01
Tpm3-201ENSMUST00000029549 Soga1E1U8D0 1418 aa21.33■■□□□ 1.01
Tpm3-201ENSMUST00000029549 Abcc1O35379 1528 aa21.33■■□□□ 1.01
Tpm3-201ENSMUST00000029549 Chd1P40201 1711 aa21.33■■□□□ 1.01
Tpm3-201ENSMUST00000029549 Sall2Q9QX96 1004 aa21.33■■□□□ 1
Tpm3-201ENSMUST00000029549 Zcchc11B2RX14 1644 aaKnown RBP21.31■■□□□ 1
Tpm3-201ENSMUST00000029549 Kif27Q7M6Z4 1394 aa21.29■■□□□ 1
Tpm3-201ENSMUST00000029549 Col17a1Q07563 1470 aa21.27■■□□□ 1
Tpm3-201ENSMUST00000029549 Fam50aQ9WV03 339 aaKnown RBP21.27■□□□□ 0.99
Tpm3-201ENSMUST00000029549 WrnO09053 1401 aa21.26■□□□□ 0.99
Tpm3-201ENSMUST00000029549 Aebp2Q9Z248 504 aaKnown RBP21.26■□□□□ 0.99
Tpm3-201ENSMUST00000029549 Lmtk2Q3TYD6 1471 aa21.24■□□□□ 0.99
Tpm3-201ENSMUST00000029549 Mia2Q91ZV0 1396 aa21.23■□□□□ 0.99
Tpm3-201ENSMUST00000029549 Gapvd1Q6PAR5 1458 aa21.23■□□□□ 0.99
Tpm3-201ENSMUST00000029549 Fhad1A6PWD2 1420 aa21.22■□□□□ 0.99
Tpm3-201ENSMUST00000029549 Wdr66E9Q743 1299 aa21.21■□□□□ 0.99
Tpm3-201ENSMUST00000029549 Cep170Q6A065 1588 aa21.2■□□□□ 0.98
Tpm3-201ENSMUST00000029549 Ccnb3Q810T2 1396 aa21.2■□□□□ 0.98
Tpm3-201ENSMUST00000029549 Dnajc5P60904 198 aa21.2■□□□□ 0.98
Tpm3-201ENSMUST00000029549 Naip2Q9QUK4 1447 aa21.19■□□□□ 0.98
Tpm3-201ENSMUST00000029549 PtprtQ99M80 1454 aa21.19■□□□□ 0.98
Tpm3-201ENSMUST00000029549 Eid3Q3V124 375 aa21.19■□□□□ 0.98
Tpm3-201ENSMUST00000029549 Fkbp15Q6P9Q6 1216 aaKnown RBP21.19■□□□□ 0.98
Tpm3-201ENSMUST00000029549 Ythdc2B2RR83 1445 aaKnown RBP21.18■□□□□ 0.98
Tpm3-201ENSMUST00000029549 Arhgef12Q8R4H2 1543 aaKnown RBP21.17■□□□□ 0.98
Tpm3-201ENSMUST00000029549 Gm14025A2AP89 1413 aa21.17■□□□□ 0.98
Tpm3-201ENSMUST00000029549 Vps8Q0P5W1 1427 aa21.16■□□□□ 0.98
Tpm3-201ENSMUST00000029549 ClspnQ80YR7 1315 aa21.15■□□□□ 0.98
Tpm3-201ENSMUST00000029549 Ccer2J3QPU5 274 aa21.15■□□□□ 0.98
Tpm3-201ENSMUST00000029549 A2mQ6GQT1 1474 aa21.15■□□□□ 0.98
Tpm3-201ENSMUST00000029549 Gcc2Q8CHG3 1679 aa21.13■□□□□ 0.97
Tpm3-201ENSMUST00000029549 Jph4Q80WT0 628 aa21.13■□□□□ 0.97
Tpm3-201ENSMUST00000029549 NexmifQ5DTT1 1515 aa21.12■□□□□ 0.97
Tpm3-201ENSMUST00000029549 Rapgef6Q5NCJ1 1609 aa21.09■□□□□ 0.97
Tpm3-201ENSMUST00000029549 Adgrl3Q80TS3 1537 aa21.07■□□□□ 0.96
Tpm3-201ENSMUST00000029549 Gm156Q58A37 223 aa21.07■□□□□ 0.96
Tpm3-201ENSMUST00000029549 Ifnlr1Q8CGK5 535 aa21.06■□□□□ 0.96
Tpm3-201ENSMUST00000029549 Ankrd36D3Z4K0 1415 aa21.06■□□□□ 0.96
Tpm3-201ENSMUST00000029549 Mug1P28665 1476 aa21.06■□□□□ 0.96
Tpm3-201ENSMUST00000029549 Arhgap31A6X8Z5 1425 aa21.05■□□□□ 0.96
Tpm3-201ENSMUST00000029549 Ncoa3O09000 1398 aa21.04■□□□□ 0.96
Tpm3-201ENSMUST00000029549 UacaQ8CGB3 1411 aa21.03■□□□□ 0.96
Tpm3-201ENSMUST00000029549 Mroh2aD3Z750 1679 aa21.02■□□□□ 0.95
Retrieved 100 of 22,080 RNA–protein pairs in 90 ms