RNA–Protein interactions for RNA: ENSMUST00000029549.15

Tpm3-201, Transcript of Tropomyosin alpha-3 chain, mousemouse

TSL 1 (best) BASIC

Gene Tpm3, Length 2,230 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm3-201ENSMUST00000029549 Gm35339A0A140LHH9 1649 aa29.37■■■□□ 2.29
Tpm3-201ENSMUST00000029549 NischQ80TM9 1593 aa29.23■■■□□ 2.27
Tpm3-201ENSMUST00000029549 Abcc9P70170 1546 aa28.31■■■□□ 2.12
Tpm3-201ENSMUST00000029549 Abcc8B2RUS7 1588 aa28.14■■■□□ 2.1
Tpm3-201ENSMUST00000029549 ScribQ80U72 1612 aa27.04■■□□□ 1.92
Tpm3-201ENSMUST00000029549 Rhox8Q6VSS7 320 aa26.56■■□□□ 1.84
Tpm3-201ENSMUST00000029549 Kdm5dQ62240 1548 aa26.17■■□□□ 1.78
Tpm3-201ENSMUST00000029549 Rtl1Q7M732 1744 aa26.04■■□□□ 1.76
Tpm3-201ENSMUST00000029549 NacadQ5SWP3 1504 aa26.02■■□□□ 1.76
Tpm3-201ENSMUST00000029549 Dcaf1Q80TR8 1506 aa25.93■■□□□ 1.74
Tpm3-201ENSMUST00000029549 Sycp2Q9CUU3 1500 aa25.55■■□□□ 1.68
Tpm3-201ENSMUST00000029549 Rb1cc1Q9ESK9 1588 aa25.54■■□□□ 1.68
Tpm3-201ENSMUST00000029549 Ccdc180J3QNE4 1664 aa25.46■■□□□ 1.67
Tpm3-201ENSMUST00000029549 BicraF8VPZ9 1578 aa25.26■■□□□ 1.63
Tpm3-201ENSMUST00000029549 Baz1aO88379 1555 aa25.22■■□□□ 1.63
Tpm3-201ENSMUST00000029549 Zcchc6Q5BLK4 1491 aaKnown RBP25.15■■□□□ 1.62
Tpm3-201ENSMUST00000029549 Crybg2B7ZCC2 1516 aa24.91■■□□□ 1.58
Tpm3-201ENSMUST00000029549 Ccdc136Q3TVA9 1136 aa24.67■■□□□ 1.54
Tpm3-201ENSMUST00000029549 Smarca2Q6DIC0 1577 aa24.62■■□□□ 1.53
Tpm3-201ENSMUST00000029549 Cecr2E9Q2Z1 1453 aa24.38■■□□□ 1.49
Tpm3-201ENSMUST00000029549 HrcG5E8J6 738 aa24.34■■□□□ 1.49
Tpm3-201ENSMUST00000029549 Trim41Q5NCC3 630 aa24.29■■□□□ 1.48
Tpm3-201ENSMUST00000029549 Pds5bQ4VA53 1446 aaKnown RBP24.24■■□□□ 1.47
Tpm3-201ENSMUST00000029549 Dnajc5bQ9CQ94 199 aa24.17■■□□□ 1.46
Tpm3-201ENSMUST00000029549 Smarca4Q3TKT4 1613 aaKnown RBP24.15■■□□□ 1.46
Tpm3-201ENSMUST00000029549 Atad2bE9Q166 1460 aaKnown RBP24.14■■□□□ 1.45
Tpm3-201ENSMUST00000029549 Thoc2B1AZI6 1594 aaKnown RBP24.03■■□□□ 1.44
Tpm3-201ENSMUST00000029549 Brd4Q9ESU6 1400 aaKnown RBP24.02■■□□□ 1.44
Tpm3-201ENSMUST00000029549 Iqgap2Q3UQ44 1575 aa24.02■■□□□ 1.44
Tpm3-201ENSMUST00000029549 Synj1Q8CHC4 1574 aa23.85■■□□□ 1.41
Tpm3-201ENSMUST00000029549 Ercc6F8VPZ5 1481 aa23.79■■□□□ 1.4
Tpm3-201ENSMUST00000029549 CftrP26361 1476 aa23.76■■□□□ 1.39
Tpm3-201ENSMUST00000029549 Frmpd1A2AKB4 1549 aa23.73■■□□□ 1.39
Tpm3-201ENSMUST00000029549 Cc2d2aQ8CFW7 1633 aa23.73■■□□□ 1.39
Tpm3-201ENSMUST00000029549 Wdr62Q3U3T8 1523 aa23.72■■□□□ 1.39
Tpm3-201ENSMUST00000029549 Cep164Q5DU05 1446 aa23.7■■□□□ 1.38
Tpm3-201ENSMUST00000029549 Cttnbp2B9EJA2 1648 aa23.69■■□□□ 1.38
Tpm3-201ENSMUST00000029549 Golga3P55937 1487 aa23.65■■□□□ 1.38
Tpm3-201ENSMUST00000029549 Cngb1E1AZ71 1325 aa23.63■■□□□ 1.37
Tpm3-201ENSMUST00000029549 Unc13aQ4KUS2 1712 aa23.55■■□□□ 1.36
Tpm3-201ENSMUST00000029549 Fam135aQ6NS59 1506 aa23.5■■□□□ 1.35
Tpm3-201ENSMUST00000029549 Rsf1E9PWW9 1441 aaKnown RBP23.5■■□□□ 1.35
Tpm3-201ENSMUST00000029549 Esf1Q3V1V3 845 aaKnown RBP23.49■■□□□ 1.35
Tpm3-201ENSMUST00000029549 Chic1Q8CBW7 227 aa23.45■■□□□ 1.34
Tpm3-201ENSMUST00000029549 Top2bQ64511 1612 aa23.44■■□□□ 1.34
Tpm3-201ENSMUST00000029549 Ccdc88bQ4QRL3 1481 aa23.39■■□□□ 1.34
Tpm3-201ENSMUST00000029549 Phldb1Q6PDH0 1371 aaKnown RBP23.37■■□□□ 1.33
Tpm3-201ENSMUST00000029549 Rpgrip1Q9EPQ2 1331 aa23.29■■□□□ 1.32
Tpm3-201ENSMUST00000029549 Ubl4bQ9CQ84 188 aa23.24■■□□□ 1.31
Tpm3-201ENSMUST00000029549 Ehmt2Q9Z148 1263 aaKnown RBP23.17■■□□□ 1.3
Tpm3-201ENSMUST00000029549 Gab3Q8BSM5 595 aa23.14■■□□□ 1.29
Tpm3-201ENSMUST00000029549 Acin1Q9JIX8 1338 aaKnown RBP23.12■■□□□ 1.29
Tpm3-201ENSMUST00000029549 Fmn1Q05860 1466 aa23.1■■□□□ 1.29
Tpm3-201ENSMUST00000029549 Kif15Q6P9L6 1387 aa23■■□□□ 1.27
Tpm3-201ENSMUST00000029549 Mrc2Q64449 1479 aa22.97■■□□□ 1.27
Tpm3-201ENSMUST00000029549 Lamc3Q9R0B6 1581 aa22.94■■□□□ 1.26
Tpm3-201ENSMUST00000029549 Top2aQ01320 1528 aaKnown RBP22.93■■□□□ 1.26
Tpm3-201ENSMUST00000029549 Cux2P70298 1426 aa22.89■■□□□ 1.26
Tpm3-201ENSMUST00000029549 Baz1bQ9Z277 1479 aa22.88■■□□□ 1.25
Tpm3-201ENSMUST00000029549 TnnQ80Z71 1560 aa22.83■■□□□ 1.24
Tpm3-201ENSMUST00000029549 Rapgef2Q8CHG7 1496 aa22.81■■□□□ 1.24
Tpm3-201ENSMUST00000029549 Kif21aQ9QXL2 1672 aa22.72■■□□□ 1.23
Tpm3-201ENSMUST00000029549 Il27Q8K3I6 234 aa22.72■■□□□ 1.23
Tpm3-201ENSMUST00000029549 Camsap1A2AHC3 1581 aa22.63■■□□□ 1.21
Tpm3-201ENSMUST00000029549 Cep162Q6ZQ06 1403 aa22.61■■□□□ 1.21
Tpm3-201ENSMUST00000029549 Npm1Q61937 292 aaKnown RBP22.61■■□□□ 1.21
Tpm3-201ENSMUST00000029549 Lrriq1Q0P5X1 1673 aa22.56■■□□□ 1.2
Tpm3-201ENSMUST00000029549 Ccdc18Q640L5 1455 aa22.53■■□□□ 1.2
Tpm3-201ENSMUST00000029549 Npm2Q80W85 207 aa22.5■■□□□ 1.19
Tpm3-201ENSMUST00000029549 Eif4g1Q6NZJ6 1600 aaKnown RBP22.48■■□□□ 1.19
Tpm3-201ENSMUST00000029549 Dhx29Q6PGC1 1365 aaKnown RBP22.43■■□□□ 1.18
Tpm3-201ENSMUST00000029549 LrpprcQ6PB66 1392 aaKnown RBP22.42■■□□□ 1.18
Tpm3-201ENSMUST00000029549 Myt1lP97500 1187 aa22.41■■□□□ 1.18
Tpm3-201ENSMUST00000029549 NrkQ9R0G8 1455 aa22.38■■□□□ 1.17
Tpm3-201ENSMUST00000029549 PtprkP35822 1457 aa22.37■■□□□ 1.17
Tpm3-201ENSMUST00000029549 Grin2bQ01097 1482 aa22.34■■□□□ 1.17
Tpm3-201ENSMUST00000029549 Urb2E9Q7L1 1524 aaKnown RBP22.34■■□□□ 1.17
Tpm3-201ENSMUST00000029549 Shroom4Q1W617 1475 aa22.33■■□□□ 1.17
Tpm3-201ENSMUST00000029549 Plb1Q3TTY0 1478 aa22.33■■□□□ 1.17
Tpm3-201ENSMUST00000029549 PogzQ8BZH4 1409 aaKnown RBP22.33■■□□□ 1.17
Tpm3-201ENSMUST00000029549 Crocc2F6XLV1 1638 aa22.32■■□□□ 1.16
Tpm3-201ENSMUST00000029549 Arhgap35Q91YM2 1499 aa22.32■■□□□ 1.16
Tpm3-201ENSMUST00000029549 Duox2A2AQ99 1517 aa22.27■■□□□ 1.16
Tpm3-201ENSMUST00000029549 Mier1Q5UAK0 511 aa22.22■■□□□ 1.15
Tpm3-201ENSMUST00000029549 Samd9lQ69Z37 1561 aa22.2■■□□□ 1.14
Tpm3-201ENSMUST00000029549 Clip1Q922J3 1391 aa22.2■■□□□ 1.14
Tpm3-201ENSMUST00000029549 Map3k1P53349 1493 aa22.19■■□□□ 1.14
Tpm3-201ENSMUST00000029549 Eif4g3Q80XI3 1579 aaKnown RBP22.14■■□□□ 1.13
Tpm3-201ENSMUST00000029549 UbtfP25976 765 aaKnown RBP22.11■■□□□ 1.13
Tpm3-201ENSMUST00000029549 Mroh2bQ7M6Y6 1581 aa22.11■■□□□ 1.13
Tpm3-201ENSMUST00000029549 NefmP08553 848 aa22.1■■□□□ 1.13
Tpm3-201ENSMUST00000029549 Efcab5A0JP43 1406 aa22.08■■□□□ 1.13
Tpm3-201ENSMUST00000029549 Eea1Q8BL66 1411 aa22.07■■□□□ 1.12
Tpm3-201ENSMUST00000029549 Rad54l2Q99NG0 1466 aa22.06■■□□□ 1.12
Tpm3-201ENSMUST00000029549 Setd1bQ8CFT2 1985 aa22.06■■□□□ 1.12
Tpm3-201ENSMUST00000029549 Zeb1Q64318 1117 aa22.04■■□□□ 1.12
Tpm3-201ENSMUST00000029549 Disp1Q3TDN0 1521 aa22.03■■□□□ 1.12
Tpm3-201ENSMUST00000029549 Ift140E9PY46 1464 aa22■■□□□ 1.11
Tpm3-201ENSMUST00000029549 AqrQ8CFQ3 1481 aaKnown RBP22■■□□□ 1.11
Tpm3-201ENSMUST00000029549 Arap1Q4LDD4 1452 aa21.98■■□□□ 1.11
Retrieved 100 of 22,080 RNA–protein pairs in 13.6 ms