RNA–Protein interactions for RNA: ENSMUST00000029414.11

Ssr3-201, Transcript of Translocon-associated protein subunit gamma, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ssr3, Length 2,957 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr3-201ENSMUST00000029414 Abca16E9PWJ7 1678 aa13.62□□□□□ -0.23
Ssr3-201ENSMUST00000029414 Gapvd1Q6PAR5 1458 aa13.6□□□□□ -0.23
Ssr3-201ENSMUST00000029414 Dnmt1P13864 1620 aaKnown RBP13.6□□□□□ -0.23
Ssr3-201ENSMUST00000029414 Arhgef5E9Q7D5 1581 aa13.6□□□□□ -0.23
Ssr3-201ENSMUST00000029414 Abcc1O35379 1528 aa13.59□□□□□ -0.23
Ssr3-201ENSMUST00000029414 WizO88286 1684 aaKnown RBP13.56□□□□□ -0.24
Ssr3-201ENSMUST00000029414 TchhA0A0B4J1F9 1599 aa13.55□□□□□ -0.24
Ssr3-201ENSMUST00000029414 Adamts12Q811B3 1600 aa13.55□□□□□ -0.24
Ssr3-201ENSMUST00000029414 BC005561E9Q5E2 1589 aa13.55□□□□□ -0.24
Ssr3-201ENSMUST00000029414 Phf23Q8BSN5 401 aa13.55□□□□□ -0.24
Ssr3-201ENSMUST00000029414 Abcc2Q8VI47 1543 aa13.54□□□□□ -0.24
Ssr3-201ENSMUST00000029414 Map3k4O08648 1597 aa13.54□□□□□ -0.24
Ssr3-201ENSMUST00000029414 AknaQ80VW7 1404 aa13.53□□□□□ -0.24
Ssr3-201ENSMUST00000029414 PtprtQ99M80 1454 aa13.51□□□□□ -0.25
Ssr3-201ENSMUST00000029414 Mroh2bQ7M6Y6 1581 aa13.51□□□□□ -0.25
Ssr3-201ENSMUST00000029414 CadpsQ80TJ1 1355 aa13.5□□□□□ -0.25
Ssr3-201ENSMUST00000029414 Pprc1Q6NZN1 1644 aa13.49□□□□□ -0.25
Ssr3-201ENSMUST00000029414 Gm156Q58A37 223 aa13.49□□□□□ -0.25
Ssr3-201ENSMUST00000029414 Eif4g1Q6NZJ6 1600 aaKnown RBP13.48□□□□□ -0.25
Ssr3-201ENSMUST00000029414 PxdnQ3UQ28 1475 aa13.47□□□□□ -0.25
Ssr3-201ENSMUST00000029414 EprsQ8CGC7 1512 aaKnown RBP13.47□□□□□ -0.25
Ssr3-201ENSMUST00000029414 Ythdc2B2RR83 1445 aaKnown RBP13.47□□□□□ -0.25
Ssr3-201ENSMUST00000029414 Rapgef2Q8CHG7 1496 aa13.46□□□□□ -0.25
Ssr3-201ENSMUST00000029414 Neo1P97798 1493 aa13.45□□□□□ -0.26
Ssr3-201ENSMUST00000029414 Setbp1Q9Z180 1582 aa13.44□□□□□ -0.26
Ssr3-201ENSMUST00000029414 Soga1E1U8D0 1418 aa13.43□□□□□ -0.26
Ssr3-201ENSMUST00000029414 Zeb1Q64318 1117 aa13.43□□□□□ -0.26
Ssr3-201ENSMUST00000029414 Ak9G3UYQ4 1894 aa13.43□□□□□ -0.26
Ssr3-201ENSMUST00000029414 Slx4Q6P1D7 1565 aa13.42□□□□□ -0.26
Ssr3-201ENSMUST00000029414 Arhgef12Q8R4H2 1543 aaKnown RBP13.42□□□□□ -0.26
Ssr3-201ENSMUST00000029414 Ttbk1Q6PCN3 1308 aa13.4□□□□□ -0.26
Ssr3-201ENSMUST00000029414 Abca5Q8K448 1642 aa13.4□□□□□ -0.26
Ssr3-201ENSMUST00000029414 Map3k1P53349 1493 aa13.4□□□□□ -0.26
Ssr3-201ENSMUST00000029414 Gm14025A2AP89 1413 aa13.4□□□□□ -0.26
Ssr3-201ENSMUST00000029414 Pcdh10E9PXQ7 1057 aa13.39□□□□□ -0.27
Ssr3-201ENSMUST00000029414 Arhgap27A2AB59 869 aa13.39□□□□□ -0.27
Ssr3-201ENSMUST00000029414 Polr1aO35134 1717 aaKnown RBP13.39□□□□□ -0.27
Ssr3-201ENSMUST00000029414 Carmil1Q6EDY6 1374 aa13.36□□□□□ -0.27
Ssr3-201ENSMUST00000029414 AI481877A2ALV5 1481 aa13.36□□□□□ -0.27
Ssr3-201ENSMUST00000029414 Arhgap35Q91YM2 1499 aa13.35□□□□□ -0.27
Ssr3-201ENSMUST00000029414 Npm2Q80W85 207 aa13.34□□□□□ -0.27
Ssr3-201ENSMUST00000029414 Gm7298A0A0N4SVU1 1476 aa13.34□□□□□ -0.27
Ssr3-201ENSMUST00000029414 Rrbp1Q99PL5 1605 aaKnown RBP13.33□□□□□ -0.28
Ssr3-201ENSMUST00000029414 Rpap1Q80TE0 1409 aa13.32□□□□□ -0.28
Ssr3-201ENSMUST00000029414 AdgbG3UZ78 1657 aa13.26□□□□□ -0.29
Ssr3-201ENSMUST00000029414 Cul7Q8VE73 1689 aa13.26□□□□□ -0.29
Ssr3-201ENSMUST00000029414 Cux1P53564 1515 aa13.25□□□□□ -0.29
Ssr3-201ENSMUST00000029414 Clasp1Q80TV8 1535 aaKnown RBP13.25□□□□□ -0.29
Ssr3-201ENSMUST00000029414 Ttc37F8VPK0 1563 aa13.25□□□□□ -0.29
Ssr3-201ENSMUST00000029414 Jph4Q80WT0 628 aa13.24□□□□□ -0.29
Ssr3-201ENSMUST00000029414 Kdm5bQ80Y84 1544 aa13.22□□□□□ -0.29
Ssr3-201ENSMUST00000029414 Mapkbp1Q6NS57 1503 aa13.2□□□□□ -0.3
Ssr3-201ENSMUST00000029414 WrnO09053 1401 aa13.2□□□□□ -0.3
Ssr3-201ENSMUST00000029414 Lrrc9Q8CDN9 1456 aa13.2□□□□□ -0.3
Ssr3-201ENSMUST00000029414 NhsB1AV60 1647 aa13.2□□□□□ -0.3
Ssr3-201ENSMUST00000029414 Clip1Q922J3 1391 aa13.2□□□□□ -0.3
Ssr3-201ENSMUST00000029414 Cep162Q6ZQ06 1403 aa13.19□□□□□ -0.3
Ssr3-201ENSMUST00000029414 Fyco1Q8VDC1 1437 aa13.19□□□□□ -0.3
Ssr3-201ENSMUST00000029414 Ppp1r18Q8BQ30 594 aa13.19□□□□□ -0.3
Ssr3-201ENSMUST00000029414 HrcG5E8J6 738 aa13.18□□□□□ -0.3
Ssr3-201ENSMUST00000029414 Igf1rQ60751 1373 aa13.17□□□□□ -0.3
Ssr3-201ENSMUST00000029414 Gcc2Q8CHG3 1679 aa13.16□□□□□ -0.3
Ssr3-201ENSMUST00000029414 Gab3Q8BSM5 595 aa13.15□□□□□ -0.3
Ssr3-201ENSMUST00000029414 Ankrd26Q811D2 1581 aa13.15□□□□□ -0.3
Ssr3-201ENSMUST00000029414 Wdr7Q920I9 1489 aa13.14□□□□□ -0.31
Ssr3-201ENSMUST00000029414 Ccdc141E9Q8Q6 1531 aa13.14□□□□□ -0.31
Ssr3-201ENSMUST00000029414 Arhgef11Q68FM7 1552 aa13.14□□□□□ -0.31
Ssr3-201ENSMUST00000029414 Znf608Q56A10 1511 aa13.13□□□□□ -0.31
Ssr3-201ENSMUST00000029414 Mroh2aD3Z750 1679 aa13.13□□□□□ -0.31
Ssr3-201ENSMUST00000029414 Depdc5P61460 1591 aa13.12□□□□□ -0.31
Ssr3-201ENSMUST00000029414 Kiaa1210E9Q0C6 1637 aa13.12□□□□□ -0.31
Ssr3-201ENSMUST00000029414 Ifnlr1Q8CGK5 535 aa13.11□□□□□ -0.31
Ssr3-201ENSMUST00000029414 Zfyve16Q80U44 1528 aa13.11□□□□□ -0.31
Ssr3-201ENSMUST00000029414 Rapgef6Q5NCJ1 1609 aa13.1□□□□□ -0.31
Ssr3-201ENSMUST00000029414 Arhgap31A6X8Z5 1425 aa13.1□□□□□ -0.31
Ssr3-201ENSMUST00000029414 Erich3F6QRE9 1637 aa13.1□□□□□ -0.31
Ssr3-201ENSMUST00000029414 Fkbp15Q6P9Q6 1216 aaKnown RBP13.1□□□□□ -0.31
Ssr3-201ENSMUST00000029414 Abca8bQ8K440 1620 aa13.07□□□□□ -0.32
Ssr3-201ENSMUST00000029414 AglF8VPN4 1532 aa13.06□□□□□ -0.32
Ssr3-201ENSMUST00000029414 Lmo7E9PYF4 1699 aaKnown RBP13.06□□□□□ -0.32
Ssr3-201ENSMUST00000029414 Plppr3Q7TPB0 716 aa13.05□□□□□ -0.32
Ssr3-201ENSMUST00000029414 Fndc1E9Q043 1732 aa13.05□□□□□ -0.32
Ssr3-201ENSMUST00000029414 Arid3cA6PWV5 409 aa13.05□□□□□ -0.32
Ssr3-201ENSMUST00000029414 BlmO88700 1416 aa13.05□□□□□ -0.32
Ssr3-201ENSMUST00000029414 Atp10dQ8K2X1 1416 aa13.04□□□□□ -0.32
Ssr3-201ENSMUST00000029414 Ncoa2Q61026 1462 aa13.04□□□□□ -0.32
Ssr3-201ENSMUST00000029414 Alpk3Q924C5 1678 aa13.03□□□□□ -0.32
Ssr3-201ENSMUST00000029414 Fancd2Q80V62 1450 aa13.02□□□□□ -0.33
Ssr3-201ENSMUST00000029414 Myt1lP97500 1187 aa13.02□□□□□ -0.33
Ssr3-201ENSMUST00000029414 Arap1Q4LDD4 1452 aa13.01□□□□□ -0.33
Ssr3-201ENSMUST00000029414 Pcf11G3X9Z4 1553 aa12.98□□□□□ -0.33
Ssr3-201ENSMUST00000029414 Magi1Q6RHR9 1471 aa12.97□□□□□ -0.33
Ssr3-201ENSMUST00000029414 Prex2Q3LAC4 1598 aa12.96□□□□□ -0.33
Ssr3-201ENSMUST00000029414 Aebp1Q640N1 1128 aa12.96□□□□□ -0.33
Ssr3-201ENSMUST00000029414 Kif27Q7M6Z4 1394 aa12.96□□□□□ -0.33
Ssr3-201ENSMUST00000029414 Cdc42bpaQ3UU96 1719 aa12.96□□□□□ -0.33
Ssr3-201ENSMUST00000029414 Rnf17Q99MV7 1640 aa12.95□□□□□ -0.34
Ssr3-201ENSMUST00000029414 Fam208aQ69ZR9 1610 aaKnown RBP12.93□□□□□ -0.34
Ssr3-201ENSMUST00000029414 Setd5Q5XJV7 1441 aa12.91□□□□□ -0.34
Ssr3-201ENSMUST00000029414 Kiaa0556Q8C753 1610 aa12.91□□□□□ -0.34
Retrieved 100 of 22,080 RNA–protein pairs in 104.4 ms