RNA–Protein interactions for RNA: ENSMUST00000029414.11

Ssr3-201, Transcript of Translocon-associated protein subunit gamma, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ssr3, Length 2,957 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr3-201ENSMUST00000029414 Gm35339A0A140LHH9 1649 aa18.72■□□□□ 0.59
Ssr3-201ENSMUST00000029414 NischQ80TM9 1593 aa18.28■□□□□ 0.52
Ssr3-201ENSMUST00000029414 Abcc9P70170 1546 aa17.72■□□□□ 0.43
Ssr3-201ENSMUST00000029414 Abcc8B2RUS7 1588 aa17.71■□□□□ 0.43
Ssr3-201ENSMUST00000029414 ScribQ80U72 1612 aa17.19■□□□□ 0.34
Ssr3-201ENSMUST00000029414 NacadQ5SWP3 1504 aa16.56■□□□□ 0.24
Ssr3-201ENSMUST00000029414 Kdm5dQ62240 1548 aa16.55■□□□□ 0.24
Ssr3-201ENSMUST00000029414 Dcaf1Q80TR8 1506 aa16.31■□□□□ 0.2
Ssr3-201ENSMUST00000029414 Sycp2Q9CUU3 1500 aa16.25■□□□□ 0.19
Ssr3-201ENSMUST00000029414 BicraF8VPZ9 1578 aa16.08■□□□□ 0.16
Ssr3-201ENSMUST00000029414 Rb1cc1Q9ESK9 1588 aa15.95■□□□□ 0.14
Ssr3-201ENSMUST00000029414 Ccdc180J3QNE4 1664 aa15.84■□□□□ 0.13
Ssr3-201ENSMUST00000029414 Baz1aO88379 1555 aa15.71■□□□□ 0.11
Ssr3-201ENSMUST00000029414 Crybg2B7ZCC2 1516 aa15.66■□□□□ 0.1
Ssr3-201ENSMUST00000029414 Dnajc5bQ9CQ94 199 aa15.6■□□□□ 0.09
Ssr3-201ENSMUST00000029414 Thoc2B1AZI6 1594 aaKnown RBP15.58■□□□□ 0.09
Ssr3-201ENSMUST00000029414 Pds5bQ4VA53 1446 aaKnown RBP15.57■□□□□ 0.08
Ssr3-201ENSMUST00000029414 Rhox8Q6VSS7 320 aa15.48■□□□□ 0.07
Ssr3-201ENSMUST00000029414 Atad2bE9Q166 1460 aaKnown RBP15.41■□□□□ 0.06
Ssr3-201ENSMUST00000029414 Zcchc6Q5BLK4 1491 aaKnown RBP15.4■□□□□ 0.06
Ssr3-201ENSMUST00000029414 Smarca4Q3TKT4 1613 aaKnown RBP15.31■□□□□ 0.04
Ssr3-201ENSMUST00000029414 Cc2d2aQ8CFW7 1633 aa15.29■□□□□ 0.04
Ssr3-201ENSMUST00000029414 Smarca2Q6DIC0 1577 aa15.28■□□□□ 0.04
Ssr3-201ENSMUST00000029414 Ercc6F8VPZ5 1481 aa15.26■□□□□ 0.03
Ssr3-201ENSMUST00000029414 Iqgap2Q3UQ44 1575 aa15.23■□□□□ 0.03
Ssr3-201ENSMUST00000029414 Fam135aQ6NS59 1506 aa15.19■□□□□ 0.02
Ssr3-201ENSMUST00000029414 Cecr2E9Q2Z1 1453 aa15.16■□□□□ 0.02
Ssr3-201ENSMUST00000029414 Wdr62Q3U3T8 1523 aa15.12■□□□□ 0.01
Ssr3-201ENSMUST00000029414 Rtl1Q7M732 1744 aa15.08■□□□□ 0
Ssr3-201ENSMUST00000029414 Frmpd1A2AKB4 1549 aa15.06■□□□□ 0
Ssr3-201ENSMUST00000029414 Unc13aQ4KUS2 1712 aa15.02■□□□□ -0
Ssr3-201ENSMUST00000029414 Baz1bQ9Z277 1479 aa15.02□□□□□ -0.01
Ssr3-201ENSMUST00000029414 Phldb1Q6PDH0 1371 aaKnown RBP14.95□□□□□ -0.02
Ssr3-201ENSMUST00000029414 Cttnbp2B9EJA2 1648 aa14.9□□□□□ -0.02
Ssr3-201ENSMUST00000029414 Synj1Q8CHC4 1574 aa14.82□□□□□ -0.04
Ssr3-201ENSMUST00000029414 CftrP26361 1476 aa14.81□□□□□ -0.04
Ssr3-201ENSMUST00000029414 Mrc2Q64449 1479 aa14.77□□□□□ -0.05
Ssr3-201ENSMUST00000029414 Ubl4bQ9CQ84 188 aa14.73□□□□□ -0.05
Ssr3-201ENSMUST00000029414 Brd4Q9ESU6 1400 aaKnown RBP14.73□□□□□ -0.05
Ssr3-201ENSMUST00000029414 Chic1Q8CBW7 227 aa14.63□□□□□ -0.07
Ssr3-201ENSMUST00000029414 Lrriq1Q0P5X1 1673 aa14.54□□□□□ -0.08
Ssr3-201ENSMUST00000029414 Ccdc136Q3TVA9 1136 aa14.52□□□□□ -0.09
Ssr3-201ENSMUST00000029414 Kif21aQ9QXL2 1672 aa14.49□□□□□ -0.09
Ssr3-201ENSMUST00000029414 Lamc3Q9R0B6 1581 aa14.47□□□□□ -0.09
Ssr3-201ENSMUST00000029414 Rsf1E9PWW9 1441 aaKnown RBP14.45□□□□□ -0.1
Ssr3-201ENSMUST00000029414 Cux2P70298 1426 aa14.44□□□□□ -0.1
Ssr3-201ENSMUST00000029414 Kif15Q6P9L6 1387 aa14.41□□□□□ -0.1
Ssr3-201ENSMUST00000029414 Esf1Q3V1V3 845 aaKnown RBP14.4□□□□□ -0.1
Ssr3-201ENSMUST00000029414 Eif4g3Q80XI3 1579 aaKnown RBP14.34□□□□□ -0.11
Ssr3-201ENSMUST00000029414 Trim41Q5NCC3 630 aa14.32□□□□□ -0.12
Ssr3-201ENSMUST00000029414 TnnQ80Z71 1560 aa14.32□□□□□ -0.12
Ssr3-201ENSMUST00000029414 Top2bQ64511 1612 aa14.3□□□□□ -0.12
Ssr3-201ENSMUST00000029414 Cep164Q5DU05 1446 aa14.24□□□□□ -0.13
Ssr3-201ENSMUST00000029414 Mapk8ip2Q9ERE9 830 aa14.23□□□□□ -0.13
Ssr3-201ENSMUST00000029414 Dnajc5P60904 198 aa14.22□□□□□ -0.13
Ssr3-201ENSMUST00000029414 Npm1Q61937 292 aaKnown RBP14.21□□□□□ -0.13
Ssr3-201ENSMUST00000029414 Camsap1A2AHC3 1581 aa14.19□□□□□ -0.14
Ssr3-201ENSMUST00000029414 Urb2E9Q7L1 1524 aaKnown RBP14.18□□□□□ -0.14
Ssr3-201ENSMUST00000029414 Golga3P55937 1487 aa14.18□□□□□ -0.14
Ssr3-201ENSMUST00000029414 Ccdc18Q640L5 1455 aa14.18□□□□□ -0.14
Ssr3-201ENSMUST00000029414 Crocc2F6XLV1 1638 aa14.17□□□□□ -0.14
Ssr3-201ENSMUST00000029414 Shroom2A2ALU4 1481 aa14.15□□□□□ -0.14
Ssr3-201ENSMUST00000029414 Dhx29Q6PGC1 1365 aaKnown RBP14.13□□□□□ -0.15
Ssr3-201ENSMUST00000029414 Plb1Q3TTY0 1478 aa14.12□□□□□ -0.15
Ssr3-201ENSMUST00000029414 LrpprcQ6PB66 1392 aaKnown RBP14.09□□□□□ -0.15
Ssr3-201ENSMUST00000029414 Fmn1Q05860 1466 aa14.07□□□□□ -0.16
Ssr3-201ENSMUST00000029414 Rusc2Q80U22 1514 aa14.05□□□□□ -0.16
Ssr3-201ENSMUST00000029414 PogzQ8BZH4 1409 aaKnown RBP14.03□□□□□ -0.16
Ssr3-201ENSMUST00000029414 Ift140E9PY46 1464 aa14.02□□□□□ -0.16
Ssr3-201ENSMUST00000029414 Il27Q8K3I6 234 aa14.01□□□□□ -0.17
Ssr3-201ENSMUST00000029414 Setd1bQ8CFT2 1985 aa14.01□□□□□ -0.17
Ssr3-201ENSMUST00000029414 Cngb1E1AZ71 1325 aa14.01□□□□□ -0.17
Ssr3-201ENSMUST00000029414 Pbrm1Q8BSQ9 1634 aaKnown RBP13.98□□□□□ -0.17
Ssr3-201ENSMUST00000029414 Duox2A2AQ99 1517 aa13.96□□□□□ -0.17
Ssr3-201ENSMUST00000029414 Grin2bQ01097 1482 aa13.95□□□□□ -0.18
Ssr3-201ENSMUST00000029414 Col17a1Q07563 1470 aa13.94□□□□□ -0.18
Ssr3-201ENSMUST00000029414 Samd9lQ69Z37 1561 aa13.92□□□□□ -0.18
Ssr3-201ENSMUST00000029414 Disp1Q3TDN0 1521 aa13.89□□□□□ -0.19
Ssr3-201ENSMUST00000029414 Pabpn1Q8CCS6 302 aaKnown RBP13.86□□□□□ -0.19
Ssr3-201ENSMUST00000029414 Zcchc11B2RX14 1644 aaKnown RBP13.86□□□□□ -0.19
Ssr3-201ENSMUST00000029414 Nup160Q9Z0W3 1402 aaKnown RBP13.85□□□□□ -0.19
Ssr3-201ENSMUST00000029414 Efcab5A0JP43 1406 aa13.82□□□□□ -0.2
Ssr3-201ENSMUST00000029414 Top2aQ01320 1528 aaKnown RBP13.82□□□□□ -0.2
Ssr3-201ENSMUST00000029414 Cc2d2bA0A286YDU8 1405 aa13.81□□□□□ -0.2
Ssr3-201ENSMUST00000029414 Gpatch8A2A6A1 1505 aa13.81□□□□□ -0.2
Ssr3-201ENSMUST00000029414 Magi3Q9EQJ9 1476 aa13.77□□□□□ -0.21
Ssr3-201ENSMUST00000029414 NrkQ9R0G8 1455 aa13.77□□□□□ -0.21
Ssr3-201ENSMUST00000029414 Grin2aP35436 1464 aa13.76□□□□□ -0.21
Ssr3-201ENSMUST00000029414 Ccdc88bQ4QRL3 1481 aa13.76□□□□□ -0.21
Ssr3-201ENSMUST00000029414 AqrQ8CFQ3 1481 aaKnown RBP13.75□□□□□ -0.21
Ssr3-201ENSMUST00000029414 Rad54l2Q99NG0 1466 aa13.74□□□□□ -0.21
Ssr3-201ENSMUST00000029414 Pelp1Q9DBD5 1123 aaKnown RBP13.73□□□□□ -0.21
Ssr3-201ENSMUST00000029414 Shroom4Q1W617 1475 aa13.7□□□□□ -0.22
Ssr3-201ENSMUST00000029414 SynmQ70IV5 1561 aa13.69□□□□□ -0.22
Ssr3-201ENSMUST00000029414 Pla2r1Q62028 1487 aa13.67□□□□□ -0.22
Ssr3-201ENSMUST00000029414 Cep170Q6A065 1588 aa13.66□□□□□ -0.22
Ssr3-201ENSMUST00000029414 Chd1P40201 1711 aa13.65□□□□□ -0.22
Ssr3-201ENSMUST00000029414 PtprkP35822 1457 aa13.65□□□□□ -0.22
Ssr3-201ENSMUST00000029414 Fgd6Q69ZL1 1399 aa13.65□□□□□ -0.22
Ssr3-201ENSMUST00000029414 Adgrl3Q80TS3 1537 aa13.63□□□□□ -0.23
Retrieved 100 of 22,080 RNA–protein pairs in 49.6 ms