RNA–Protein interactions for RNA: ENSMUST00000028382.12

Nup35-201, Transcript of Nucleoporin NUP53, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup35, Length 1,559 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35-201ENSMUST00000028382 Cc2d2bA0A286YDU8 1405 aa25.1■■□□□ 1.61
Nup35-201ENSMUST00000028382 Carmil1Q6EDY6 1374 aa25.09■■□□□ 1.61
Nup35-201ENSMUST00000028382 Clip1Q922J3 1391 aa25.06■■□□□ 1.6
Nup35-201ENSMUST00000028382 EprsQ8CGC7 1512 aaKnown RBP24.99■■□□□ 1.59
Nup35-201ENSMUST00000028382 WizO88286 1684 aaKnown RBP24.96■■□□□ 1.59
Nup35-201ENSMUST00000028382 Cux1P53564 1515 aa24.93■■□□□ 1.58
Nup35-201ENSMUST00000028382 Adamts12Q811B3 1600 aa24.93■■□□□ 1.58
Nup35-201ENSMUST00000028382 Abca16E9PWJ7 1678 aa24.91■■□□□ 1.58
Nup35-201ENSMUST00000028382 Polr1aO35134 1717 aaKnown RBP24.9■■□□□ 1.58
Nup35-201ENSMUST00000028382 Ankrd26Q811D2 1581 aa24.88■■□□□ 1.57
Nup35-201ENSMUST00000028382 PxdnQ3UQ28 1475 aa24.87■■□□□ 1.57
Nup35-201ENSMUST00000028382 TchhA0A0B4J1F9 1599 aa24.86■■□□□ 1.57
Nup35-201ENSMUST00000028382 CadpsQ80TJ1 1355 aa24.84■■□□□ 1.57
Nup35-201ENSMUST00000028382 Abcc2Q8VI47 1543 aa24.83■■□□□ 1.57
Nup35-201ENSMUST00000028382 Rpap1Q80TE0 1409 aa24.81■■□□□ 1.56
Nup35-201ENSMUST00000028382 Gm7298A0A0N4SVU1 1476 aa24.81■■□□□ 1.56
Nup35-201ENSMUST00000028382 Fyco1Q8VDC1 1437 aa24.78■■□□□ 1.56
Nup35-201ENSMUST00000028382 Erich3F6QRE9 1637 aa24.78■■□□□ 1.56
Nup35-201ENSMUST00000028382 Abca5Q8K448 1642 aa24.78■■□□□ 1.56
Nup35-201ENSMUST00000028382 Setd5Q5XJV7 1441 aa24.75■■□□□ 1.55
Nup35-201ENSMUST00000028382 Eea1Q8BL66 1411 aa24.74■■□□□ 1.55
Nup35-201ENSMUST00000028382 Arhgap27A2AB59 869 aa24.74■■□□□ 1.55
Nup35-201ENSMUST00000028382 Soga1E1U8D0 1418 aa24.73■■□□□ 1.55
Nup35-201ENSMUST00000028382 Fgd6Q69ZL1 1399 aa24.73■■□□□ 1.55
Nup35-201ENSMUST00000028382 Dnmt1P13864 1620 aaKnown RBP24.71■■□□□ 1.55
Nup35-201ENSMUST00000028382 Arap1Q4LDD4 1452 aa24.69■■□□□ 1.54
Nup35-201ENSMUST00000028382 Lmo7E9PYF4 1699 aaKnown RBP24.68■■□□□ 1.54
Nup35-201ENSMUST00000028382 Map3k4O08648 1597 aa24.67■■□□□ 1.54
Nup35-201ENSMUST00000028382 Shroom2A2ALU4 1481 aa24.65■■□□□ 1.54
Nup35-201ENSMUST00000028382 BC005561E9Q5E2 1589 aa24.63■■□□□ 1.53
Nup35-201ENSMUST00000028382 Ap3b1Q9Z1T1 1105 aa24.63■■□□□ 1.53
Nup35-201ENSMUST00000028382 Pcf11G3X9Z4 1553 aa24.62■■□□□ 1.53
Nup35-201ENSMUST00000028382 Slx4Q6P1D7 1565 aa24.61■■□□□ 1.53
Nup35-201ENSMUST00000028382 AknaQ80VW7 1404 aa24.59■■□□□ 1.53
Nup35-201ENSMUST00000028382 Arhgef5E9Q7D5 1581 aa24.58■■□□□ 1.53
Nup35-201ENSMUST00000028382 Aebp1Q640N1 1128 aa24.58■■□□□ 1.52
Nup35-201ENSMUST00000028382 Neo1P97798 1493 aa24.56■■□□□ 1.52
Nup35-201ENSMUST00000028382 WrnO09053 1401 aa24.55■■□□□ 1.52
Nup35-201ENSMUST00000028382 Pabpn1Q8CCS6 302 aaKnown RBP24.54■■□□□ 1.52
Nup35-201ENSMUST00000028382 Abcc1O35379 1528 aa24.51■■□□□ 1.51
Nup35-201ENSMUST00000028382 Zcchc11B2RX14 1644 aaKnown RBP24.51■■□□□ 1.51
Nup35-201ENSMUST00000028382 BlmO88700 1416 aa24.51■■□□□ 1.51
Nup35-201ENSMUST00000028382 Chd1P40201 1711 aa24.5■■□□□ 1.51
Nup35-201ENSMUST00000028382 Pelp1Q9DBD5 1123 aaKnown RBP24.48■■□□□ 1.51
Nup35-201ENSMUST00000028382 Ehmt2Q9Z148 1263 aaKnown RBP24.47■■□□□ 1.51
Nup35-201ENSMUST00000028382 CntlnA2AM05 1397 aa24.44■■□□□ 1.5
Nup35-201ENSMUST00000028382 Tiam1Q60610 1591 aa24.43■■□□□ 1.5
Nup35-201ENSMUST00000028382 Jph4Q80WT0 628 aa24.42■■□□□ 1.5
Nup35-201ENSMUST00000028382 Naip1Q9QWK5 1403 aa24.42■■□□□ 1.5
Nup35-201ENSMUST00000028382 Arhgef12Q8R4H2 1543 aaKnown RBP24.41■■□□□ 1.5
Nup35-201ENSMUST00000028382 Plekhg3Q4VAC9 1341 aa24.4■■□□□ 1.5
Nup35-201ENSMUST00000028382 Gm14025A2AP89 1413 aa24.39■■□□□ 1.49
Nup35-201ENSMUST00000028382 Kif27Q7M6Z4 1394 aa24.37■■□□□ 1.49
Nup35-201ENSMUST00000028382 Peg3Q3URU2 1571 aa24.36■■□□□ 1.49
Nup35-201ENSMUST00000028382 Rapgef6Q5NCJ1 1609 aa24.34■■□□□ 1.49
Nup35-201ENSMUST00000028382 Gm1043A0A140LJC2 1431 aa24.32■■□□□ 1.48
Nup35-201ENSMUST00000028382 Rrbp1Q99PL5 1605 aaKnown RBP24.32■■□□□ 1.48
Nup35-201ENSMUST00000028382 Arhgap31A6X8Z5 1425 aa24.32■■□□□ 1.48
Nup35-201ENSMUST00000028382 Gapvd1Q6PAR5 1458 aa24.31■■□□□ 1.48
Nup35-201ENSMUST00000028382 Ythdc2B2RR83 1445 aaKnown RBP24.29■■□□□ 1.48
Nup35-201ENSMUST00000028382 Lmod2Q3UHZ5 550 aa24.27■■□□□ 1.48
Nup35-201ENSMUST00000028382 Cep170Q6A065 1588 aa24.25■■□□□ 1.47
Nup35-201ENSMUST00000028382 PtprtQ99M80 1454 aa24.25■■□□□ 1.47
Nup35-201ENSMUST00000028382 Ccdc141E9Q8Q6 1531 aa24.25■■□□□ 1.47
Nup35-201ENSMUST00000028382 Mroh2aD3Z750 1679 aa24.24■■□□□ 1.47
Nup35-201ENSMUST00000028382 Fkbp15Q6P9Q6 1216 aaKnown RBP24.24■■□□□ 1.47
Nup35-201ENSMUST00000028382 Arhgef11Q68FM7 1552 aa24.23■■□□□ 1.47
Nup35-201ENSMUST00000028382 Col17a1Q07563 1470 aa24.22■■□□□ 1.47
Nup35-201ENSMUST00000028382 Ncoa3O09000 1398 aa24.2■■□□□ 1.46
Nup35-201ENSMUST00000028382 Ncoa2Q61026 1462 aa24.18■■□□□ 1.46
Nup35-201ENSMUST00000028382 Kdm5bQ80Y84 1544 aa24.17■■□□□ 1.46
Nup35-201ENSMUST00000028382 Mug1P28665 1476 aa24.16■■□□□ 1.46
Nup35-201ENSMUST00000028382 Cul7Q8VE73 1689 aa24.15■■□□□ 1.46
Nup35-201ENSMUST00000028382 Gcc2Q8CHG3 1679 aa24.12■■□□□ 1.45
Nup35-201ENSMUST00000028382 Magi1Q6RHR9 1471 aa24.12■■□□□ 1.45
Nup35-201ENSMUST00000028382 Cdc42bpaQ3UU96 1719 aa24.12■■□□□ 1.45
Nup35-201ENSMUST00000028382 Gm156Q58A37 223 aa24.12■■□□□ 1.45
Nup35-201ENSMUST00000028382 NhsB1AV60 1647 aa24.09■■□□□ 1.45
Nup35-201ENSMUST00000028382 UbtfP25976 765 aaKnown RBP24.08■■□□□ 1.45
Nup35-201ENSMUST00000028382 NexmifQ5DTT1 1515 aa24.08■■□□□ 1.45
Nup35-201ENSMUST00000028382 Kiaa1551Q5DTW7 1521 aa24.07■■□□□ 1.44
Nup35-201ENSMUST00000028382 Adgrl3Q80TS3 1537 aa24.07■■□□□ 1.44
Nup35-201ENSMUST00000028382 Prex2Q3LAC4 1598 aa24.06■■□□□ 1.44
Nup35-201ENSMUST00000028382 Fam163aQ8CAA5 168 aa24.05■■□□□ 1.44
Nup35-201ENSMUST00000028382 AI481877A2ALV5 1481 aa24.05■■□□□ 1.44
Nup35-201ENSMUST00000028382 Lmtk2Q3TYD6 1471 aa24.05■■□□□ 1.44
Nup35-201ENSMUST00000028382 Fancd2Q80V62 1450 aa24.04■■□□□ 1.44
Nup35-201ENSMUST00000028382 Mapkbp1Q6NS57 1503 aa24.01■■□□□ 1.43
Nup35-201ENSMUST00000028382 Igf1rQ60751 1373 aa24.01■■□□□ 1.43
Nup35-201ENSMUST00000028382 Dhx57Q6P5D3 1388 aaKnown RBP23.99■■□□□ 1.43
Nup35-201ENSMUST00000028382 Kiaa1210E9Q0C6 1637 aa23.99■■□□□ 1.43
Nup35-201ENSMUST00000028382 Znf608Q56A10 1511 aa23.98■■□□□ 1.43
Nup35-201ENSMUST00000028382 Ccnb3Q810T2 1396 aa23.98■■□□□ 1.43
Nup35-201ENSMUST00000028382 Ifnlr1Q8CGK5 535 aa23.97■■□□□ 1.43
Nup35-201ENSMUST00000028382 Lrrc9Q8CDN9 1456 aa23.95■■□□□ 1.42
Nup35-201ENSMUST00000028382 Fam208aQ69ZR9 1610 aaKnown RBP23.93■■□□□ 1.42
Nup35-201ENSMUST00000028382 Setbp1Q9Z180 1582 aa23.93■■□□□ 1.42
Nup35-201ENSMUST00000028382 3425401B19RikD3Z1D3 1412 aa23.92■■□□□ 1.42
Nup35-201ENSMUST00000028382 Atp10dQ8K2X1 1416 aa23.92■■□□□ 1.42
Nup35-201ENSMUST00000028382 Wdr7Q920I9 1489 aa23.9■■□□□ 1.42
Retrieved 100 of 22,080 RNA–protein pairs in 7.3 ms