RNA–Protein interactions for RNA: ENSMUST00000028382.12

Nup35-201, Transcript of Nucleoporin NUP53, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup35, Length 1,559 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35-201ENSMUST00000028382 Gm35339A0A140LHH9 1649 aa34.01■■■■□ 3.03
Nup35-201ENSMUST00000028382 NischQ80TM9 1593 aa33.83■■■■□ 3.01
Nup35-201ENSMUST00000028382 Abcc9P70170 1546 aa32.81■■■□□ 2.84
Nup35-201ENSMUST00000028382 Abcc8B2RUS7 1588 aa32.54■■■□□ 2.8
Nup35-201ENSMUST00000028382 ScribQ80U72 1612 aa31.03■■■□□ 2.56
Nup35-201ENSMUST00000028382 Kdm5dQ62240 1548 aa30.12■■■□□ 2.41
Nup35-201ENSMUST00000028382 Dcaf1Q80TR8 1506 aa30.08■■■□□ 2.41
Nup35-201ENSMUST00000028382 NacadQ5SWP3 1504 aa30.05■■■□□ 2.4
Nup35-201ENSMUST00000028382 Rhox8Q6VSS7 320 aa29.84■■■□□ 2.37
Nup35-201ENSMUST00000028382 Rb1cc1Q9ESK9 1588 aa29.54■■■□□ 2.32
Nup35-201ENSMUST00000028382 Sycp2Q9CUU3 1500 aa29.46■■■□□ 2.31
Nup35-201ENSMUST00000028382 Ccdc180J3QNE4 1664 aa29.23■■■□□ 2.27
Nup35-201ENSMUST00000028382 Baz1aO88379 1555 aa29.16■■■□□ 2.26
Nup35-201ENSMUST00000028382 BicraF8VPZ9 1578 aa29■■■□□ 2.23
Nup35-201ENSMUST00000028382 Crybg2B7ZCC2 1516 aa28.92■■■□□ 2.22
Nup35-201ENSMUST00000028382 Zcchc6Q5BLK4 1491 aaKnown RBP28.6■■■□□ 2.17
Nup35-201ENSMUST00000028382 Rtl1Q7M732 1744 aa28.51■■■□□ 2.15
Nup35-201ENSMUST00000028382 Smarca2Q6DIC0 1577 aa28.39■■■□□ 2.14
Nup35-201ENSMUST00000028382 Cecr2E9Q2Z1 1453 aa28.09■■■□□ 2.09
Nup35-201ENSMUST00000028382 Pds5bQ4VA53 1446 aaKnown RBP27.93■■■□□ 2.06
Nup35-201ENSMUST00000028382 Smarca4Q3TKT4 1613 aaKnown RBP27.88■■■□□ 2.05
Nup35-201ENSMUST00000028382 Ccdc136Q3TVA9 1136 aa27.87■■■□□ 2.05
Nup35-201ENSMUST00000028382 Atad2bE9Q166 1460 aaKnown RBP27.83■■■□□ 2.05
Nup35-201ENSMUST00000028382 Mapk8ip2Q9ERE9 830 aa27.71■■■□□ 2.03
Nup35-201ENSMUST00000028382 Iqgap2Q3UQ44 1575 aa27.64■■■□□ 2.02
Nup35-201ENSMUST00000028382 Synj1Q8CHC4 1574 aa27.56■■■□□ 2
Nup35-201ENSMUST00000028382 Brd4Q9ESU6 1400 aaKnown RBP27.55■■■□□ 2
Nup35-201ENSMUST00000028382 Thoc2B1AZI6 1594 aaKnown RBP27.51■■□□□ 1.99
Nup35-201ENSMUST00000028382 CftrP26361 1476 aa27.51■■□□□ 1.99
Nup35-201ENSMUST00000028382 Cttnbp2B9EJA2 1648 aa27.45■■□□□ 1.99
Nup35-201ENSMUST00000028382 Trim41Q5NCC3 630 aa27.4■■□□□ 1.98
Nup35-201ENSMUST00000028382 Ercc6F8VPZ5 1481 aa27.35■■□□□ 1.97
Nup35-201ENSMUST00000028382 Wdr62Q3U3T8 1523 aa27.3■■□□□ 1.96
Nup35-201ENSMUST00000028382 Frmpd1A2AKB4 1549 aa27.3■■□□□ 1.96
Nup35-201ENSMUST00000028382 Dnajc5bQ9CQ94 199 aa27.28■■□□□ 1.96
Nup35-201ENSMUST00000028382 Cc2d2aQ8CFW7 1633 aa27.12■■□□□ 1.93
Nup35-201ENSMUST00000028382 Unc13aQ4KUS2 1712 aa27.04■■□□□ 1.92
Nup35-201ENSMUST00000028382 Esf1Q3V1V3 845 aaKnown RBP27.01■■□□□ 1.92
Nup35-201ENSMUST00000028382 Fam135aQ6NS59 1506 aa27■■□□□ 1.91
Nup35-201ENSMUST00000028382 Phldb1Q6PDH0 1371 aaKnown RBP26.93■■□□□ 1.9
Nup35-201ENSMUST00000028382 Golga3P55937 1487 aa26.88■■□□□ 1.89
Nup35-201ENSMUST00000028382 Top2bQ64511 1612 aa26.82■■□□□ 1.88
Nup35-201ENSMUST00000028382 Cngb1E1AZ71 1325 aa26.75■■□□□ 1.87
Nup35-201ENSMUST00000028382 Ubl4bQ9CQ84 188 aa26.67■■□□□ 1.86
Nup35-201ENSMUST00000028382 Rsf1E9PWW9 1441 aaKnown RBP26.56■■□□□ 1.84
Nup35-201ENSMUST00000028382 Lamc3Q9R0B6 1581 aa26.56■■□□□ 1.84
Nup35-201ENSMUST00000028382 Baz1bQ9Z277 1479 aa26.56■■□□□ 1.84
Nup35-201ENSMUST00000028382 Chic1Q8CBW7 227 aa26.5■■□□□ 1.83
Nup35-201ENSMUST00000028382 Kif15Q6P9L6 1387 aa26.49■■□□□ 1.83
Nup35-201ENSMUST00000028382 TnnQ80Z71 1560 aa26.48■■□□□ 1.83
Nup35-201ENSMUST00000028382 Fmn1Q05860 1466 aa26.42■■□□□ 1.82
Nup35-201ENSMUST00000028382 Ccdc88bQ4QRL3 1481 aa26.39■■□□□ 1.82
Nup35-201ENSMUST00000028382 HrcG5E8J6 738 aa26.38■■□□□ 1.81
Nup35-201ENSMUST00000028382 Mrc2Q64449 1479 aa26.35■■□□□ 1.81
Nup35-201ENSMUST00000028382 Cux2P70298 1426 aa26.34■■□□□ 1.81
Nup35-201ENSMUST00000028382 Camsap1A2AHC3 1581 aa26.15■■□□□ 1.78
Nup35-201ENSMUST00000028382 Top2aQ01320 1528 aaKnown RBP26.08■■□□□ 1.77
Nup35-201ENSMUST00000028382 Ccdc18Q640L5 1455 aa26.07■■□□□ 1.76
Nup35-201ENSMUST00000028382 Npm1Q61937 292 aaKnown RBP26.07■■□□□ 1.76
Nup35-201ENSMUST00000028382 Il27Q8K3I6 234 aa26.06■■□□□ 1.76
Nup35-201ENSMUST00000028382 Cep164Q5DU05 1446 aa26.05■■□□□ 1.76
Nup35-201ENSMUST00000028382 Kif21aQ9QXL2 1672 aa26.04■■□□□ 1.76
Nup35-201ENSMUST00000028382 LrpprcQ6PB66 1392 aaKnown RBP25.89■■□□□ 1.74
Nup35-201ENSMUST00000028382 Grin2bQ01097 1482 aa25.86■■□□□ 1.73
Nup35-201ENSMUST00000028382 Dhx29Q6PGC1 1365 aaKnown RBP25.83■■□□□ 1.73
Nup35-201ENSMUST00000028382 PogzQ8BZH4 1409 aaKnown RBP25.8■■□□□ 1.72
Nup35-201ENSMUST00000028382 Lrriq1Q0P5X1 1673 aa25.79■■□□□ 1.72
Nup35-201ENSMUST00000028382 Gab3Q8BSM5 595 aa25.73■■□□□ 1.71
Nup35-201ENSMUST00000028382 NrkQ9R0G8 1455 aa25.72■■□□□ 1.71
Nup35-201ENSMUST00000028382 Crocc2F6XLV1 1638 aa25.72■■□□□ 1.71
Nup35-201ENSMUST00000028382 Duox2A2AQ99 1517 aa25.71■■□□□ 1.71
Nup35-201ENSMUST00000028382 PtprkP35822 1457 aa25.71■■□□□ 1.71
Nup35-201ENSMUST00000028382 Urb2E9Q7L1 1524 aaKnown RBP25.65■■□□□ 1.7
Nup35-201ENSMUST00000028382 Shroom4Q1W617 1475 aa25.65■■□□□ 1.7
Nup35-201ENSMUST00000028382 Plb1Q3TTY0 1478 aa25.64■■□□□ 1.69
Nup35-201ENSMUST00000028382 Efcab5A0JP43 1406 aa25.62■■□□□ 1.69
Nup35-201ENSMUST00000028382 Rapgef2Q8CHG7 1496 aa25.59■■□□□ 1.69
Nup35-201ENSMUST00000028382 Samd9lQ69Z37 1561 aa25.54■■□□□ 1.68
Nup35-201ENSMUST00000028382 Npm2Q80W85 207 aa25.44■■□□□ 1.66
Nup35-201ENSMUST00000028382 Eif4g1Q6NZJ6 1600 aaKnown RBP25.41■■□□□ 1.66
Nup35-201ENSMUST00000028382 Ift140E9PY46 1464 aa25.39■■□□□ 1.66
Nup35-201ENSMUST00000028382 Disp1Q3TDN0 1521 aa25.39■■□□□ 1.66
Nup35-201ENSMUST00000028382 Eif4g3Q80XI3 1579 aaKnown RBP25.39■■□□□ 1.66
Nup35-201ENSMUST00000028382 Cep162Q6ZQ06 1403 aa25.39■■□□□ 1.65
Nup35-201ENSMUST00000028382 Rad54l2Q99NG0 1466 aa25.38■■□□□ 1.65
Nup35-201ENSMUST00000028382 Setd1bQ8CFT2 1985 aa25.36■■□□□ 1.65
Nup35-201ENSMUST00000028382 Arhgap35Q91YM2 1499 aa25.36■■□□□ 1.65
Nup35-201ENSMUST00000028382 Mroh2bQ7M6Y6 1581 aa25.35■■□□□ 1.65
Nup35-201ENSMUST00000028382 SynmQ70IV5 1561 aa25.32■■□□□ 1.64
Nup35-201ENSMUST00000028382 Magi3Q9EQJ9 1476 aa25.28■■□□□ 1.64
Nup35-201ENSMUST00000028382 Zeb1Q64318 1117 aa25.25■■□□□ 1.63
Nup35-201ENSMUST00000028382 Pbrm1Q8BSQ9 1634 aaKnown RBP25.25■■□□□ 1.63
Nup35-201ENSMUST00000028382 Map3k1P53349 1493 aa25.23■■□□□ 1.63
Nup35-201ENSMUST00000028382 Nup160Q9Z0W3 1402 aaKnown RBP25.23■■□□□ 1.63
Nup35-201ENSMUST00000028382 Grin2aP35436 1464 aa25.21■■□□□ 1.63
Nup35-201ENSMUST00000028382 Pla2r1Q62028 1487 aa25.2■■□□□ 1.62
Nup35-201ENSMUST00000028382 Rusc2Q80U22 1514 aa25.18■■□□□ 1.62
Nup35-201ENSMUST00000028382 Myt1lP97500 1187 aa25.14■■□□□ 1.62
Nup35-201ENSMUST00000028382 AqrQ8CFQ3 1481 aaKnown RBP25.14■■□□□ 1.62
Nup35-201ENSMUST00000028382 Gpatch8A2A6A1 1505 aa25.11■■□□□ 1.61
Retrieved 100 of 22,080 RNA–protein pairs in 28.8 ms