RNA–Protein interactions for RNA: ENSMUST00000017290.10

Brca1-201, Transcript of Breast cancer type 1 susceptibility protein homolog, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Brca1, Length 6,572 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1-201ENSMUST00000017290 Plcb2A3KGF7 1181 aa11.07□□□□□ -0.64
Brca1-201ENSMUST00000017290 Safb2Q80YR5 991 aaKnown RBP11.06□□□□□ -0.64
Brca1-201ENSMUST00000017290 Noc3lQ8VI84 807 aaKnown RBP11.03□□□□□ -0.64
Brca1-201ENSMUST00000017290 Trim30dE9PWL0 497 aa11.02□□□□□ -0.64
Brca1-201ENSMUST00000017290 CanxP35564 591 aaKnown RBP11.02□□□□□ -0.64
Brca1-201ENSMUST00000017290 Spryd3E9Q9B3 442 aa11.02□□□□□ -0.65
Brca1-201ENSMUST00000017290 Mak16Q8BGS0 296 aaKnown RBP11.02□□□□□ -0.65
Brca1-201ENSMUST00000017290 Podxl2Q8CAE9 603 aa11.02□□□□□ -0.65
Brca1-201ENSMUST00000017290 Wdr43Q6ZQL4 677 aaKnown RBP10.97□□□□□ -0.65
Brca1-201ENSMUST00000017290 Npm1Q61937 292 aaKnown RBP10.97□□□□□ -0.65
Brca1-201ENSMUST00000017290 Tnnt2P50752 301 aa10.96□□□□□ -0.66
Brca1-201ENSMUST00000017290 Pes1Q9EQ61 584 aaKnown RBP10.95□□□□□ -0.66
Brca1-201ENSMUST00000017290 Apbb1Q9QXJ1 710 aa10.95□□□□□ -0.66
Brca1-201ENSMUST00000017290 Armcx1Q9CX83 456 aa10.93□□□□□ -0.66
Brca1-201ENSMUST00000017290 Isy1Q69ZQ2 285 aaKnown RBP10.91□□□□□ -0.66
Brca1-201ENSMUST00000017290 Zcchc6Q5BLK4 1491 aaKnown RBP10.91□□□□□ -0.66
Brca1-201ENSMUST00000017290 Casc1Q6TDU8 730 aa10.89□□□□□ -0.67
Brca1-201ENSMUST00000017290 NgefQ8CHT1 710 aa10.87□□□□□ -0.67
Brca1-201ENSMUST00000017290 Sh3bp5Q9Z131 463 aa10.87□□□□□ -0.67
Brca1-201ENSMUST00000017290 Dbr1Q923B1 550 aa10.87□□□□□ -0.67
Brca1-201ENSMUST00000017290 Anapc15P60007 132 aa10.87□□□□□ -0.67
Brca1-201ENSMUST00000017290 Mrs2Q5NCE8 434 aa10.86□□□□□ -0.67
Brca1-201ENSMUST00000017290 Adam1bQ8R534 806 aa10.86□□□□□ -0.67
Brca1-201ENSMUST00000017290 Erich6bQ9D4S6 220 aa10.86□□□□□ -0.67
Brca1-201ENSMUST00000017290 Pcmtd1P59913 357 aa10.86□□□□□ -0.67
Brca1-201ENSMUST00000017290 Gm35339A0A140LHH9 1649 aa10.85□□□□□ -0.67
Brca1-201ENSMUST00000017290 Chic2Q9D9G3 165 aa10.84□□□□□ -0.67
Brca1-201ENSMUST00000017290 Sall2Q9QX96 1004 aa10.83□□□□□ -0.68
Brca1-201ENSMUST00000017290 1700019A02RikA0A087WPV9 146 aa10.83□□□□□ -0.68
Brca1-201ENSMUST00000017290 Neurod2Q62414 383 aa10.83□□□□□ -0.68
Brca1-201ENSMUST00000017290 Mical1Q8VDP3 1048 aa10.83□□□□□ -0.68
Brca1-201ENSMUST00000017290 SetQ9EQU5 289 aaKnown RBP10.82□□□□□ -0.68
Brca1-201ENSMUST00000017290 Gm6268A2A3U9 297 aa10.82□□□□□ -0.68
Brca1-201ENSMUST00000017290 Aplp2Q06335 707 aa10.81□□□□□ -0.68
Brca1-201ENSMUST00000017290 Ccdc9Q8VC31 543 aaKnown RBP10.81□□□□□ -0.68
Brca1-201ENSMUST00000017290 Anks4bQ8K3X6 423 aa10.81□□□□□ -0.68
Brca1-201ENSMUST00000017290 Taok2Q6ZQ29 1240 aa10.81□□□□□ -0.68
Brca1-201ENSMUST00000017290 Hsp90b1P08113 802 aaKnown RBP10.8□□□□□ -0.68
Brca1-201ENSMUST00000017290 Fam71e1A1L3C1 212 aa10.8□□□□□ -0.68
Brca1-201ENSMUST00000017290 Ncbp3Q8BZR9 615 aaKnown RBP10.8□□□□□ -0.68
Brca1-201ENSMUST00000017290 Ecm2Q5FW85 670 aa10.79□□□□□ -0.68
Brca1-201ENSMUST00000017290 Q8BT18 775 aa10.79□□□□□ -0.68
Brca1-201ENSMUST00000017290 Rtl1Q7M732 1744 aa10.78□□□□□ -0.68
Brca1-201ENSMUST00000017290 Arid4aF8VPQ2 1261 aaKnown RBP10.78□□□□□ -0.68
Brca1-201ENSMUST00000017290 Htatsf1Q8BGC0 757 aa10.78□□□□□ -0.68
Brca1-201ENSMUST00000017290 Rassf8Q8CJ96 419 aa10.77□□□□□ -0.68
Brca1-201ENSMUST00000017290 Calcoco2A2A6M5 331 aa10.76□□□□□ -0.69
Brca1-201ENSMUST00000017290 B4galnt3Q6L8S8 986 aa10.74□□□□□ -0.69
Brca1-201ENSMUST00000017290 Dnttip2Q8R2M2 758 aaKnown RBP10.74□□□□□ -0.69
Brca1-201ENSMUST00000017290 MyclP10166 368 aa10.73□□□□□ -0.69
Brca1-201ENSMUST00000017290 Ftsj3Q9DBE9 838 aaKnown RBP10.73□□□□□ -0.69
Brca1-201ENSMUST00000017290 MsnP26041 577 aaKnown RBP10.72□□□□□ -0.69
Brca1-201ENSMUST00000017290 IbspQ61711 324 aa10.72□□□□□ -0.69
Brca1-201ENSMUST00000017290 Gpatch11Q3UFS4 262 aa10.72□□□□□ -0.69
Brca1-201ENSMUST00000017290 Kdm2aP59997 1161 aa10.71□□□□□ -0.69
Brca1-201ENSMUST00000017290 Vps53Q8CCB4 832 aa10.7□□□□□ -0.7
Brca1-201ENSMUST00000017290 Mapk8ip3Q9ESN9 1337 aa10.69□□□□□ -0.7
Brca1-201ENSMUST00000017290 Kiaa0754Q69ZZ9 979 aa10.69□□□□□ -0.7
Brca1-201ENSMUST00000017290 Wwc2Q6NXJ0 1187 aa10.69□□□□□ -0.7
Brca1-201ENSMUST00000017290 Ofd1Q80Z25 1017 aa10.69□□□□□ -0.7
Brca1-201ENSMUST00000017290 Exosc9Q9JHI7 438 aaKnown RBP10.69□□□□□ -0.7
Brca1-201ENSMUST00000017290 CgnP59242 1191 aa10.69□□□□□ -0.7
Brca1-201ENSMUST00000017290 Ubap1lG3UW59 384 aa10.69□□□□□ -0.7
Brca1-201ENSMUST00000017290 Rgl3Q3UYI5 709 aa10.68□□□□□ -0.7
Brca1-201ENSMUST00000017290 Ccdc27Q3V036 639 aa10.68□□□□□ -0.7
Brca1-201ENSMUST00000017290 IqubQ8CDK3 788 aa10.68□□□□□ -0.7
Brca1-201ENSMUST00000017290 NischQ80TM9 1593 aa10.68□□□□□ -0.7
Brca1-201ENSMUST00000017290 Gm973E9Q295 1059 aa10.67□□□□□ -0.7
Brca1-201ENSMUST00000017290 Ggt6Q6PDE7 497 aa10.66□□□□□ -0.7
Brca1-201ENSMUST00000017290 MccE9PWI3 1003 aa10.66□□□□□ -0.7
Brca1-201ENSMUST00000017290 Map7O88735 730 aa10.66□□□□□ -0.7
Brca1-201ENSMUST00000017290 Paf1Q8K2T8 535 aa10.65□□□□□ -0.7
Brca1-201ENSMUST00000017290 Samd1D3YXK1 519 aa10.65□□□□□ -0.7
Brca1-201ENSMUST00000017290 Fam193aQ8CGI1 1231 aaKnown RBP10.64□□□□□ -0.71
Brca1-201ENSMUST00000017290 Plin1Q8CGN5 517 aa10.64□□□□□ -0.71
Brca1-201ENSMUST00000017290 CrebrfQ8CDG5 640 aaKnown RBP10.63□□□□□ -0.71
Brca1-201ENSMUST00000017290 Tpm3-rs7D3Z2H9 248 aa10.62□□□□□ -0.71
Brca1-201ENSMUST00000017290 Clip1Q922J3 1391 aa10.62□□□□□ -0.71
Brca1-201ENSMUST00000017290 Ripply1Q2WG77 201 aa10.62□□□□□ -0.71
Brca1-201ENSMUST00000017290 Grwd1Q810D6 446 aaKnown RBP10.62□□□□□ -0.71
Brca1-201ENSMUST00000017290 Ppm1gQ61074 542 aa10.61□□□□□ -0.71
Brca1-201ENSMUST00000017290 Cnga1P29974 684 aa10.61□□□□□ -0.71
Brca1-201ENSMUST00000017290 Iffo2Q8R2V2 512 aa10.61□□□□□ -0.71
Brca1-201ENSMUST00000017290 Bcl11aQ9QYE3 773 aa10.61□□□□□ -0.71
Brca1-201ENSMUST00000017290 Slc4a3P16283 1227 aa10.61□□□□□ -0.71
Brca1-201ENSMUST00000017290 R3hcc1Q8BSI6 488 aa10.61□□□□□ -0.71
Brca1-201ENSMUST00000017290 Srpk2O54781 681 aaKnown RBP10.6□□□□□ -0.71
Brca1-201ENSMUST00000017290 Tnnt1O88346 262 aa10.6□□□□□ -0.71
Brca1-201ENSMUST00000017290 Irx3P81067 507 aa10.6□□□□□ -0.71
Brca1-201ENSMUST00000017290 Cald1E9QA15 768 aaKnown RBP10.59□□□□□ -0.71
Brca1-201ENSMUST00000017290 Ppm1fQ8CGA0 452 aa10.59□□□□□ -0.71
Brca1-201ENSMUST00000017290 Abcc9P70170 1546 aa10.59□□□□□ -0.71
Brca1-201ENSMUST00000017290 Hdgfl1Q2VPR5 283 aa10.58□□□□□ -0.72
Brca1-201ENSMUST00000017290 Tomm22Q9CPQ3 142 aa10.58□□□□□ -0.72
Brca1-201ENSMUST00000017290 AcrbpQ3V140 540 aa10.58□□□□□ -0.72
Brca1-201ENSMUST00000017290 Senp3Q9EP97 568 aaKnown RBP10.58□□□□□ -0.72
Brca1-201ENSMUST00000017290 U2surpQ6NV83 1029 aaKnown RBP10.58□□□□□ -0.72
Brca1-201ENSMUST00000017290 Drc7Q6V3W6 876 aa10.58□□□□□ -0.72
Brca1-201ENSMUST00000017290 AU015836B2RUM3 263 aa10.57□□□□□ -0.72
Brca1-201ENSMUST00000017290 Gm20521D3Z5F7 333 aa10.57□□□□□ -0.72
Retrieved 100 of 22,080 RNA–protein pairs in 23.3 ms