RNA–Protein interactions for RNA: ENSMUST00000011877.12

Sptbn1-202, Transcript of Spectrin beta chain, non-erythrocytic 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sptbn1, Length 8,238 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sptbn1-202ENSMUST00000011877 Eid3Q3V124 375 aa12.84□□□□□ -0.35
Sptbn1-202ENSMUST00000011877 Eif4g2Q62448 906 aaKnown RBP12.84□□□□□ -0.35
Sptbn1-202ENSMUST00000011877 Lmod3E9QA62 571 aa12.84□□□□□ -0.35
Sptbn1-202ENSMUST00000011877 NgefQ8CHT1 710 aa12.84□□□□□ -0.35
Sptbn1-202ENSMUST00000011877 Vsig10D3YX43 558 aa12.84□□□□□ -0.35
Sptbn1-202ENSMUST00000011877 Supt5hO55201 1082 aaKnown RBP12.83□□□□□ -0.36
Sptbn1-202ENSMUST00000011877 Aplp2Q06335 707 aa12.82□□□□□ -0.36
Sptbn1-202ENSMUST00000011877 Exosc9Q9JHI7 438 aaKnown RBP12.81□□□□□ -0.36
Sptbn1-202ENSMUST00000011877 Zfp777B9EKF4 885 aa12.8□□□□□ -0.36
Sptbn1-202ENSMUST00000011877 Srpk2O54781 681 aaKnown RBP12.79□□□□□ -0.36
Sptbn1-202ENSMUST00000011877 Gm6268A2A3U9 297 aa12.77□□□□□ -0.37
Sptbn1-202ENSMUST00000011877 Pes1Q9EQ61 584 aaKnown RBP12.77□□□□□ -0.37
Sptbn1-202ENSMUST00000011877 Brd4Q9ESU6 1400 aaKnown RBP12.76□□□□□ -0.37
Sptbn1-202ENSMUST00000011877 Iqcf3Q9D498 203 aa12.75□□□□□ -0.37
Sptbn1-202ENSMUST00000011877 Ppp1r18Q8BQ30 594 aa12.73□□□□□ -0.37
Sptbn1-202ENSMUST00000011877 Mapk8ip3Q9ESN9 1337 aa12.72□□□□□ -0.37
Sptbn1-202ENSMUST00000011877 Kdm2aP59997 1161 aa12.72□□□□□ -0.37
Sptbn1-202ENSMUST00000011877 Q8BT18 775 aa12.71□□□□□ -0.37
Sptbn1-202ENSMUST00000011877 Gm20521D3Z5F7 333 aa12.7□□□□□ -0.38
Sptbn1-202ENSMUST00000011877 Trim44Q9QXA7 346 aa12.7□□□□□ -0.38
Sptbn1-202ENSMUST00000011877 PtmaP26350 111 aa12.68□□□□□ -0.38
Sptbn1-202ENSMUST00000011877 BlmO88700 1416 aa12.68□□□□□ -0.38
Sptbn1-202ENSMUST00000011877 Arhgap27A2AB59 869 aa12.66□□□□□ -0.38
Sptbn1-202ENSMUST00000011877 Rgl3Q3UYI5 709 aa12.66□□□□□ -0.38
Sptbn1-202ENSMUST00000011877 Mroh3A0A1D5RM54 893 aa12.66□□□□□ -0.38
Sptbn1-202ENSMUST00000011877 Ppp4r2Q0VGB7 417 aa12.66□□□□□ -0.38
Sptbn1-202ENSMUST00000011877 Hsp90ab1P11499 724 aaKnown RBP12.66□□□□□ -0.38
Sptbn1-202ENSMUST00000011877 Stag3O70576 1240 aa12.66□□□□□ -0.38
Sptbn1-202ENSMUST00000011877 Ppm1fQ8CGA0 452 aa12.66□□□□□ -0.38
Sptbn1-202ENSMUST00000011877 Chmp4bQ9D8B3 224 aaKnown RBP12.65□□□□□ -0.38
Sptbn1-202ENSMUST00000011877 Mrs2Q5NCE8 434 aa12.64□□□□□ -0.39
Sptbn1-202ENSMUST00000011877 Dnai2A2AC93 623 aa12.64□□□□□ -0.39
Sptbn1-202ENSMUST00000011877 Sh3bp5Q9Z131 463 aa12.63□□□□□ -0.39
Sptbn1-202ENSMUST00000011877 Calr4Q3TQS0 420 aa12.63□□□□□ -0.39
Sptbn1-202ENSMUST00000011877 MlecQ6ZQI3 291 aaKnown RBP12.62□□□□□ -0.39
Sptbn1-202ENSMUST00000011877 HdgfP51859 237 aaKnown RBP12.62□□□□□ -0.39
Sptbn1-202ENSMUST00000011877 Stk24Q99KH8 431 aa12.62□□□□□ -0.39
Sptbn1-202ENSMUST00000011877 Trim30dE9PWL0 497 aa12.6□□□□□ -0.39
Sptbn1-202ENSMUST00000011877 1700019A02RikA0A087WPV9 146 aa12.6□□□□□ -0.39
Sptbn1-202ENSMUST00000011877 Slc4a1apE9PX68 744 aa12.6□□□□□ -0.39
Sptbn1-202ENSMUST00000011877 NudcO35685 332 aaKnown RBP12.59□□□□□ -0.39
Sptbn1-202ENSMUST00000011877 Arid4bA2CG63 1314 aaKnown RBP12.59□□□□□ -0.39
Sptbn1-202ENSMUST00000011877 Nol10Q5RJG1 687 aaKnown RBP12.58□□□□□ -0.39
Sptbn1-202ENSMUST00000011877 Grwd1Q810D6 446 aaKnown RBP12.57□□□□□ -0.4
Sptbn1-202ENSMUST00000011877 Noc3lQ8VI84 807 aaKnown RBP12.57□□□□□ -0.4
Sptbn1-202ENSMUST00000011877 Rrp7aQ9D1C9 280 aaKnown RBP12.57□□□□□ -0.4
Sptbn1-202ENSMUST00000011877 Anapc15P60007 132 aa12.57□□□□□ -0.4
Sptbn1-202ENSMUST00000011877 Hsp90b1P08113 802 aaKnown RBP12.55□□□□□ -0.4
Sptbn1-202ENSMUST00000011877 Rtf1A2AQ19 715 aaKnown RBP12.54□□□□□ -0.4
Sptbn1-202ENSMUST00000011877 Ercc6F8VPZ5 1481 aa12.53□□□□□ -0.4
Sptbn1-202ENSMUST00000011877 Casc1Q6TDU8 730 aa12.52□□□□□ -0.4
Sptbn1-202ENSMUST00000011877 Wdr43Q6ZQL4 677 aaKnown RBP12.52□□□□□ -0.41
Sptbn1-202ENSMUST00000011877 Map7O88735 730 aa12.52□□□□□ -0.41
Sptbn1-202ENSMUST00000011877 Rassf8Q8CJ96 419 aa12.51□□□□□ -0.41
Sptbn1-202ENSMUST00000011877 Plcb2A3KGF7 1181 aa12.51□□□□□ -0.41
Sptbn1-202ENSMUST00000011877 MccE9PWI3 1003 aa12.51□□□□□ -0.41
Sptbn1-202ENSMUST00000011877 Neurod2Q62414 383 aa12.51□□□□□ -0.41
Sptbn1-202ENSMUST00000011877 Card11Q8CIS0 1159 aa12.5□□□□□ -0.41
Sptbn1-202ENSMUST00000011877 CanxP35564 591 aaKnown RBP12.49□□□□□ -0.41
Sptbn1-202ENSMUST00000011877 Isy1Q69ZQ2 285 aaKnown RBP12.49□□□□□ -0.41
Sptbn1-202ENSMUST00000011877 Adam1bQ8R534 806 aa12.48□□□□□ -0.41
Sptbn1-202ENSMUST00000011877 Setd5Q5XJV7 1441 aa12.48□□□□□ -0.41
Sptbn1-202ENSMUST00000011877 Prm3Q62100 101 aa12.47□□□□□ -0.41
Sptbn1-202ENSMUST00000011877 Wwc2Q6NXJ0 1187 aa12.47□□□□□ -0.41
Sptbn1-202ENSMUST00000011877 Apbb1Q9QXJ1 710 aa12.47□□□□□ -0.41
Sptbn1-202ENSMUST00000011877 Psme1P97371 249 aa12.46□□□□□ -0.41
Sptbn1-202ENSMUST00000011877 Kif15Q6P9L6 1387 aa12.46□□□□□ -0.42
Sptbn1-202ENSMUST00000011877 Ccdc18Q640L5 1455 aa12.45□□□□□ -0.42
Sptbn1-202ENSMUST00000011877 Pde3bQ61409 1100 aa12.45□□□□□ -0.42
Sptbn1-202ENSMUST00000011877 Rsf1E9PWW9 1441 aaKnown RBP12.45□□□□□ -0.42
Sptbn1-202ENSMUST00000011877 Mtus2Q3UHD3 1353 aa12.44□□□□□ -0.42
Sptbn1-202ENSMUST00000011877 Ubap1lG3UW59 384 aa12.44□□□□□ -0.42
Sptbn1-202ENSMUST00000011877 Cnga1P29974 684 aa12.43□□□□□ -0.42
Sptbn1-202ENSMUST00000011877 Ofd1Q80Z25 1017 aa12.43□□□□□ -0.42
Sptbn1-202ENSMUST00000011877 HnrnpuQ8VEK3 800 aaKnown RBP12.43□□□□□ -0.42
Sptbn1-202ENSMUST00000011877 Sart3Q9JLI8 962 aaKnown RBP12.43□□□□□ -0.42
Sptbn1-202ENSMUST00000011877 Gm973E9Q295 1059 aa12.43□□□□□ -0.42
Sptbn1-202ENSMUST00000011877 Htatsf1Q8BGC0 757 aa12.43□□□□□ -0.42
Sptbn1-202ENSMUST00000011877 Cep164Q5DU05 1446 aa12.43□□□□□ -0.42
Sptbn1-202ENSMUST00000011877 Tpm3-rs7D3Z2H9 248 aa12.42□□□□□ -0.42
Sptbn1-202ENSMUST00000011877 Gm38655A0A286YDK6 273 aa12.42□□□□□ -0.42
Sptbn1-202ENSMUST00000011877 Cwc22Q8C5N3 908 aaKnown RBP12.41□□□□□ -0.42
Sptbn1-202ENSMUST00000011877 Vps53Q8CCB4 832 aa12.41□□□□□ -0.42
Sptbn1-202ENSMUST00000011877 Ciz1Q8VEH2 845 aa12.4□□□□□ -0.43
Sptbn1-202ENSMUST00000011877 KnstrnQ9D9Z1 312 aaKnown RBP12.39□□□□□ -0.43
Sptbn1-202ENSMUST00000011877 Sox12Q04890 314 aa12.38□□□□□ -0.43
Sptbn1-202ENSMUST00000011877 Txndc2Q6P902 515 aa12.38□□□□□ -0.43
Sptbn1-202ENSMUST00000011877 U2surpQ6NV83 1029 aaKnown RBP12.38□□□□□ -0.43
Sptbn1-202ENSMUST00000011877 Q3TQI7 289 aaKnown RBP12.36□□□□□ -0.43
Sptbn1-202ENSMUST00000011877 Mak16Q8BGS0 296 aaKnown RBP12.36□□□□□ -0.43
Sptbn1-202ENSMUST00000011877 Stk26Q99JT2 416 aa12.36□□□□□ -0.43
Sptbn1-202ENSMUST00000011877 Armcx1Q9CX83 456 aa12.36□□□□□ -0.43
Sptbn1-202ENSMUST00000011877 Tomm22Q9CPQ3 142 aa12.36□□□□□ -0.43
Sptbn1-202ENSMUST00000011877 Ccdc9Q8VC31 543 aaKnown RBP12.35□□□□□ -0.43
Sptbn1-202ENSMUST00000011877 Tnnt1O88346 262 aa12.35□□□□□ -0.43
Sptbn1-202ENSMUST00000011877 Plin1Q8CGN5 517 aa12.35□□□□□ -0.43
Sptbn1-202ENSMUST00000011877 Iffo2Q8R2V2 512 aa12.35□□□□□ -0.43
Sptbn1-202ENSMUST00000011877 Arid3cA6PWV5 409 aa12.34□□□□□ -0.43
Sptbn1-202ENSMUST00000011877 Chmp3Q9CQ10 224 aa12.34□□□□□ -0.43
Sptbn1-202ENSMUST00000011877 MecomP14404 1042 aa12.33□□□□□ -0.44
Retrieved 100 of 22,080 RNA–protein pairs in 23.8 ms