RNA–Protein interactions for RNA: ENSMUST00000011877.12

Sptbn1-202, Transcript of Spectrin beta chain, non-erythrocytic 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sptbn1, Length 8,238 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sptbn1-202ENSMUST00000011877 Rhox8Q6VSS7 320 aa17.19■□□□□ 0.34
Sptbn1-202ENSMUST00000011877 Ube2uB1AUC4 352 aa15.51■□□□□ 0.07
Sptbn1-202ENSMUST00000011877 Esf1Q3V1V3 845 aaKnown RBP15.42■□□□□ 0.06
Sptbn1-202ENSMUST00000011877 Zeb1Q64318 1117 aa15.36■□□□□ 0.05
Sptbn1-202ENSMUST00000011877 Cngb1E1AZ71 1325 aa15.32■□□□□ 0.04
Sptbn1-202ENSMUST00000011877 Pelp1Q9DBD5 1123 aaKnown RBP15.32■□□□□ 0.04
Sptbn1-202ENSMUST00000011877 Las1lA2BE28 776 aaKnown RBP15.18■□□□□ 0.02
Sptbn1-202ENSMUST00000011877 Rpgrip1Q9EPQ2 1331 aa15.17■□□□□ 0.02
Sptbn1-202ENSMUST00000011877 Wdr66E9Q743 1299 aa15.13■□□□□ 0.01
Sptbn1-202ENSMUST00000011877 Npm2Q80W85 207 aa15.11■□□□□ 0.01
Sptbn1-202ENSMUST00000011877 Ehmt2Q9Z148 1263 aaKnown RBP15.06■□□□□ 0
Sptbn1-202ENSMUST00000011877 Ccdc136Q3TVA9 1136 aa14.97□□□□□ -0.01
Sptbn1-202ENSMUST00000011877 Gab3Q8BSM5 595 aa14.84□□□□□ -0.03
Sptbn1-202ENSMUST00000011877 Myt1lP97500 1187 aa14.83□□□□□ -0.04
Sptbn1-202ENSMUST00000011877 Trim41Q5NCC3 630 aa14.74□□□□□ -0.05
Sptbn1-202ENSMUST00000011877 Amer1Q7TS75 1132 aa14.59□□□□□ -0.07
Sptbn1-202ENSMUST00000011877 Stra8P70278 393 aa14.42□□□□□ -0.1
Sptbn1-202ENSMUST00000011877 Slc24a1Q91WD8 1130 aa14.39□□□□□ -0.11
Sptbn1-202ENSMUST00000011877 4930567H17RikQ3V0K5 233 aa14.39□□□□□ -0.11
Sptbn1-202ENSMUST00000011877 Os9Q8K2C7 672 aa14.37□□□□□ -0.11
Sptbn1-202ENSMUST00000011877 Il27Q8K3I6 234 aa14.34□□□□□ -0.11
Sptbn1-202ENSMUST00000011877 Anp32bQ9EST5 272 aaKnown RBP14.29□□□□□ -0.12
Sptbn1-202ENSMUST00000011877 UbtfP25976 765 aaKnown RBP14.27□□□□□ -0.12
Sptbn1-202ENSMUST00000011877 CenpbP27790 599 aa14.15□□□□□ -0.14
Sptbn1-202ENSMUST00000011877 Gm13697A2AK42 830 aa14.14□□□□□ -0.15
Sptbn1-202ENSMUST00000011877 NrdcQ8BHG1 1161 aa14.1□□□□□ -0.15
Sptbn1-202ENSMUST00000011877 NeflP08551 543 aa14.09□□□□□ -0.15
Sptbn1-202ENSMUST00000011877 Neurod1Q60867 357 aa14.09□□□□□ -0.15
Sptbn1-202ENSMUST00000011877 NefmP08553 848 aa14.08□□□□□ -0.16
Sptbn1-202ENSMUST00000011877 HrcG5E8J6 738 aa14.07□□□□□ -0.16
Sptbn1-202ENSMUST00000011877 Fam50aQ9WV03 339 aaKnown RBP14.02□□□□□ -0.16
Sptbn1-202ENSMUST00000011877 NclP09405 707 aaKnown RBP14.02□□□□□ -0.16
Sptbn1-202ENSMUST00000011877 Ap3b1Q9Z1T1 1105 aa14□□□□□ -0.17
Sptbn1-202ENSMUST00000011877 4933416C03RikQ3V063 378 aa13.96□□□□□ -0.17
Sptbn1-202ENSMUST00000011877 DiexfQ8BTT6 772 aaKnown RBP13.9□□□□□ -0.18
Sptbn1-202ENSMUST00000011877 Ifnlr1Q8CGK5 535 aa13.86□□□□□ -0.19
Sptbn1-202ENSMUST00000011877 Ttbk1Q6PCN3 1308 aa13.85□□□□□ -0.19
Sptbn1-202ENSMUST00000011877 Eif5bQ05D44 1216 aaKnown RBP13.84□□□□□ -0.19
Sptbn1-202ENSMUST00000011877 Zbtb7cQ8VCZ7 619 aa13.84□□□□□ -0.19
Sptbn1-202ENSMUST00000011877 Atp1b4Q99ME6 356 aa13.84□□□□□ -0.19
Sptbn1-202ENSMUST00000011877 Chic1Q8CBW7 227 aa13.83□□□□□ -0.19
Sptbn1-202ENSMUST00000011877 Gm13695A2AK44 830 aa13.83□□□□□ -0.2
Sptbn1-202ENSMUST00000011877 Hnrnpul2Q00PI9 745 aaKnown RBP13.81□□□□□ -0.2
Sptbn1-202ENSMUST00000011877 Plppr3Q7TPB0 716 aa13.76□□□□□ -0.21
Sptbn1-202ENSMUST00000011877 NischQ80TM9 1593 aa13.76□□□□□ -0.21
Sptbn1-202ENSMUST00000011877 Npm1Q61937 292 aaKnown RBP13.72□□□□□ -0.21
Sptbn1-202ENSMUST00000011877 Tnnt3Q9QZ47 272 aa13.69□□□□□ -0.22
Sptbn1-202ENSMUST00000011877 Cdk11bP24788 784 aaKnown RBP13.69□□□□□ -0.22
Sptbn1-202ENSMUST00000011877 Erich6D3Z6S9 713 aa13.67□□□□□ -0.22
Sptbn1-202ENSMUST00000011877 Acin1Q9JIX8 1338 aaKnown RBP13.63□□□□□ -0.23
Sptbn1-202ENSMUST00000011877 Nlrp6Q91WS2 869 aa13.62□□□□□ -0.23
Sptbn1-202ENSMUST00000011877 Hdac5Q9Z2V6 1113 aa13.61□□□□□ -0.23
Sptbn1-202ENSMUST00000011877 Zcchc6Q5BLK4 1491 aaKnown RBP13.56□□□□□ -0.24
Sptbn1-202ENSMUST00000011877 Safb2Q80YR5 991 aaKnown RBP13.53□□□□□ -0.24
Sptbn1-202ENSMUST00000011877 Abcc9P70170 1546 aa13.5□□□□□ -0.25
Sptbn1-202ENSMUST00000011877 Prdm10Q3UTQ7 1184 aa13.5□□□□□ -0.25
Sptbn1-202ENSMUST00000011877 Polr3glQ8R0C0 218 aa13.5□□□□□ -0.25
Sptbn1-202ENSMUST00000011877 Zbtb4Q5F293 982 aa13.5□□□□□ -0.25
Sptbn1-202ENSMUST00000011877 Lmod2Q3UHZ5 550 aa13.49□□□□□ -0.25
Sptbn1-202ENSMUST00000011877 Gm35339A0A140LHH9 1649 aa13.48□□□□□ -0.25
Sptbn1-202ENSMUST00000011877 TonslQ6NZL6 1363 aa13.46□□□□□ -0.25
Sptbn1-202ENSMUST00000011877 Nop58Q6DFW4 536 aaKnown RBP13.46□□□□□ -0.26
Sptbn1-202ENSMUST00000011877 Fkbp15Q6P9Q6 1216 aaKnown RBP13.45□□□□□ -0.26
Sptbn1-202ENSMUST00000011877 Ccdc180J3QNE4 1664 aa13.39□□□□□ -0.27
Sptbn1-202ENSMUST00000011877 Ppargc1bQ8VHJ7 1014 aa13.36□□□□□ -0.27
Sptbn1-202ENSMUST00000011877 Hsp90aa1P07901 733 aaKnown RBP13.34□□□□□ -0.27
Sptbn1-202ENSMUST00000011877 Rtl5Q5DTT4 599 aa13.31□□□□□ -0.28
Sptbn1-202ENSMUST00000011877 Znf326O88291 580 aa13.27□□□□□ -0.28
Sptbn1-202ENSMUST00000011877 CatipB9EKE5 520 aa13.25□□□□□ -0.29
Sptbn1-202ENSMUST00000011877 Myt1Q8CFC2 1127 aa13.22□□□□□ -0.29
Sptbn1-202ENSMUST00000011877 DaxxO35613 739 aa13.22□□□□□ -0.29
Sptbn1-202ENSMUST00000011877 Rangap1P46061 589 aaKnown RBP13.2□□□□□ -0.3
Sptbn1-202ENSMUST00000011877 P3h3Q8CG70 732 aa13.2□□□□□ -0.3
Sptbn1-202ENSMUST00000011877 Rtl1Q7M732 1744 aa13.2□□□□□ -0.3
Sptbn1-202ENSMUST00000011877 ArxO35085 564 aa13.2□□□□□ -0.3
Sptbn1-202ENSMUST00000011877 Plekhg3Q4VAC9 1341 aa13.19□□□□□ -0.3
Sptbn1-202ENSMUST00000011877 Upf2A2AT37 1269 aaKnown RBP13.15□□□□□ -0.3
Sptbn1-202ENSMUST00000011877 Fgd1P52734 960 aa13.15□□□□□ -0.31
Sptbn1-202ENSMUST00000011877 Ubl4bQ9CQ84 188 aa13.11□□□□□ -0.31
Sptbn1-202ENSMUST00000011877 Clstn2Q9ER65 966 aa13.07□□□□□ -0.32
Sptbn1-202ENSMUST00000011877 MyclP10166 368 aa13.05□□□□□ -0.32
Sptbn1-202ENSMUST00000011877 Mier1Q5UAK0 511 aa13.05□□□□□ -0.32
Sptbn1-202ENSMUST00000011877 Irx6Q9ER75 438 aa13.03□□□□□ -0.32
Sptbn1-202ENSMUST00000011877 Anp32aO35381 247 aa13.01□□□□□ -0.33
Sptbn1-202ENSMUST00000011877 Pcgf6Q99NA9 353 aa12.97□□□□□ -0.33
Sptbn1-202ENSMUST00000011877 Ythdc1E9Q5K9 736 aaKnown RBP12.97□□□□□ -0.33
Sptbn1-202ENSMUST00000011877 Ccer2J3QPU5 274 aa12.96□□□□□ -0.34
Sptbn1-202ENSMUST00000011877 Csrnp3P59055 597 aa12.95□□□□□ -0.34
Sptbn1-202ENSMUST00000011877 IqubQ8CDK3 788 aa12.94□□□□□ -0.34
Sptbn1-202ENSMUST00000011877 Rad21Q61550 635 aaKnown RBP12.93□□□□□ -0.34
Sptbn1-202ENSMUST00000011877 Rtn4Q99P72 1162 aaKnown RBP12.92□□□□□ -0.34
Sptbn1-202ENSMUST00000011877 ClspnQ80YR7 1315 aa12.92□□□□□ -0.34
Sptbn1-202ENSMUST00000011877 Mapk8ip2Q9ERE9 830 aa12.91□□□□□ -0.34
Sptbn1-202ENSMUST00000011877 Ggt6Q6PDE7 497 aa12.91□□□□□ -0.34
Sptbn1-202ENSMUST00000011877 DekQ7TNV0 380 aaKnown RBP12.9□□□□□ -0.34
Sptbn1-202ENSMUST00000011877 Clstn1Q9EPL2 979 aa12.88□□□□□ -0.35
Sptbn1-202ENSMUST00000011877 Clip1Q922J3 1391 aa12.88□□□□□ -0.35
Sptbn1-202ENSMUST00000011877 Trim26Q99PN3 545 aa12.88□□□□□ -0.35
Sptbn1-202ENSMUST00000011877 Chic2Q9D9G3 165 aa12.86□□□□□ -0.35
Sptbn1-202ENSMUST00000011877 PnnO35691 725 aaKnown RBP12.85□□□□□ -0.35
Retrieved 100 of 22,080 RNA–protein pairs in 70.8 ms