RNA–Protein interactions for RNA: ENSMUST00000004201.7

Col5a3-201, Transcript of Collagen type V alpha 3 chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col5a3, Length 6,119 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a3-201ENSMUST00000004201 Ccer2J3QPU5 274 aa19.29■□□□□ 0.68
Col5a3-201ENSMUST00000004201 Cep164Q5DU05 1446 aa19.28■□□□□ 0.68
Col5a3-201ENSMUST00000004201 Dcaf1Q80TR8 1506 aa19.24■□□□□ 0.67
Col5a3-201ENSMUST00000004201 Fam71e1A1L3C1 212 aa19.19■□□□□ 0.66
Col5a3-201ENSMUST00000004201 Mrs2Q5NCE8 434 aa19.18■□□□□ 0.66
Col5a3-201ENSMUST00000004201 CanxP35564 591 aaKnown RBP19.17■□□□□ 0.66
Col5a3-201ENSMUST00000004201 Ubl4bQ9CQ84 188 aa19.15■□□□□ 0.66
Col5a3-201ENSMUST00000004201 Rb1cc1Q9ESK9 1588 aa19.15■□□□□ 0.66
Col5a3-201ENSMUST00000004201 1700123L14RikQ3V2K7 440 aa19.14■□□□□ 0.65
Col5a3-201ENSMUST00000004201 Hsp90ab1P11499 724 aaKnown RBP19.13■□□□□ 0.65
Col5a3-201ENSMUST00000004201 BlmO88700 1416 aa19.11■□□□□ 0.65
Col5a3-201ENSMUST00000004201 PtmaP26350 111 aa19.09■□□□□ 0.65
Col5a3-201ENSMUST00000004201 Ccdc27Q3V036 639 aa19.05■□□□□ 0.64
Col5a3-201ENSMUST00000004201 Bcl11aQ9QYE3 773 aa19.05■□□□□ 0.64
Col5a3-201ENSMUST00000004201 Trim26Q99PN3 545 aa19.03■□□□□ 0.64
Col5a3-201ENSMUST00000004201 Trim30dE9PWL0 497 aa19.03■□□□□ 0.64
Col5a3-201ENSMUST00000004201 Fgd1P52734 960 aa19.02■□□□□ 0.63
Col5a3-201ENSMUST00000004201 Clstn2Q9ER65 966 aa19.02■□□□□ 0.63
Col5a3-201ENSMUST00000004201 Safb2Q80YR5 991 aaKnown RBP18.98■□□□□ 0.63
Col5a3-201ENSMUST00000004201 P3h3Q8CG70 732 aa18.97■□□□□ 0.63
Col5a3-201ENSMUST00000004201 Arid4bA2CG63 1314 aaKnown RBP18.97■□□□□ 0.63
Col5a3-201ENSMUST00000004201 Plcb2A3KGF7 1181 aa18.96■□□□□ 0.63
Col5a3-201ENSMUST00000004201 Rgl3Q3UYI5 709 aa18.95■□□□□ 0.62
Col5a3-201ENSMUST00000004201 Htatsf1Q8BGC0 757 aa18.95■□□□□ 0.62
Col5a3-201ENSMUST00000004201 Setd5Q5XJV7 1441 aa18.92■□□□□ 0.62
Col5a3-201ENSMUST00000004201 Irx3P81067 507 aa18.87■□□□□ 0.61
Col5a3-201ENSMUST00000004201 Irx6Q9ER75 438 aa18.86■□□□□ 0.61
Col5a3-201ENSMUST00000004201 Tnnt2P50752 301 aa18.83■□□□□ 0.61
Col5a3-201ENSMUST00000004201 Ofd1Q80Z25 1017 aa18.82■□□□□ 0.6
Col5a3-201ENSMUST00000004201 Aebp2Q9Z248 504 aaKnown RBP18.8■□□□□ 0.6
Col5a3-201ENSMUST00000004201 NacadQ5SWP3 1504 aa18.79■□□□□ 0.6
Col5a3-201ENSMUST00000004201 Ppm1gQ61074 542 aa18.79■□□□□ 0.6
Col5a3-201ENSMUST00000004201 Adam1bQ8R534 806 aa18.78■□□□□ 0.6
Col5a3-201ENSMUST00000004201 Kdm2aP59997 1161 aa18.78■□□□□ 0.6
Col5a3-201ENSMUST00000004201 Grwd1Q810D6 446 aaKnown RBP18.78■□□□□ 0.6
Col5a3-201ENSMUST00000004201 Znf316Q6PGE4 1016 aa18.78■□□□□ 0.6
Col5a3-201ENSMUST00000004201 Apbb1Q9QXJ1 710 aa18.76■□□□□ 0.59
Col5a3-201ENSMUST00000004201 Spryd3E9Q9B3 442 aa18.75■□□□□ 0.59
Col5a3-201ENSMUST00000004201 IqubQ8CDK3 788 aa18.73■□□□□ 0.59
Col5a3-201ENSMUST00000004201 AU015836B2RUM3 263 aa18.7■□□□□ 0.58
Col5a3-201ENSMUST00000004201 Srpk2O54781 681 aaKnown RBP18.69■□□□□ 0.58
Col5a3-201ENSMUST00000004201 Card11Q8CIS0 1159 aa18.69■□□□□ 0.58
Col5a3-201ENSMUST00000004201 Neurod2Q62414 383 aa18.69■□□□□ 0.58
Col5a3-201ENSMUST00000004201 Casc1Q6TDU8 730 aa18.68■□□□□ 0.58
Col5a3-201ENSMUST00000004201 Mroh3A0A1D5RM54 893 aa18.66■□□□□ 0.58
Col5a3-201ENSMUST00000004201 Exosc9Q9JHI7 438 aaKnown RBP18.66■□□□□ 0.58
Col5a3-201ENSMUST00000004201 Kif15Q6P9L6 1387 aa18.66■□□□□ 0.58
Col5a3-201ENSMUST00000004201 Dbr1Q923B1 550 aa18.66■□□□□ 0.58
Col5a3-201ENSMUST00000004201 Baz1aO88379 1555 aa18.64■□□□□ 0.57
Col5a3-201ENSMUST00000004201 Gm20521D3Z5F7 333 aa18.64■□□□□ 0.57
Col5a3-201ENSMUST00000004201 Dnttip2Q8R2M2 758 aaKnown RBP18.64■□□□□ 0.57
Col5a3-201ENSMUST00000004201 Arhgap27A2AB59 869 aa18.63■□□□□ 0.57
Col5a3-201ENSMUST00000004201 PnnO35691 725 aaKnown RBP18.62■□□□□ 0.57
Col5a3-201ENSMUST00000004201 Znf326O88291 580 aa18.62■□□□□ 0.57
Col5a3-201ENSMUST00000004201 Mapk8ip3Q9ESN9 1337 aa18.61■□□□□ 0.57
Col5a3-201ENSMUST00000004201 Erich6bQ9D4S6 220 aa18.61■□□□□ 0.57
Col5a3-201ENSMUST00000004201 Eea1Q8BL66 1411 aa18.6■□□□□ 0.57
Col5a3-201ENSMUST00000004201 Rsf1E9PWW9 1441 aaKnown RBP18.6■□□□□ 0.57
Col5a3-201ENSMUST00000004201 SafbD3YXK2 937 aaKnown RBP18.6■□□□□ 0.57
Col5a3-201ENSMUST00000004201 Map7O88735 730 aa18.59■□□□□ 0.57
Col5a3-201ENSMUST00000004201 Golga3P55937 1487 aa18.59■□□□□ 0.57
Col5a3-201ENSMUST00000004201 B4galnt3Q6L8S8 986 aa18.57■□□□□ 0.56
Col5a3-201ENSMUST00000004201 Gm6268A2A3U9 297 aa18.56■□□□□ 0.56
Col5a3-201ENSMUST00000004201 Armcx1Q9CX83 456 aa18.56■□□□□ 0.56
Col5a3-201ENSMUST00000004201 Cwc22Q8C5N3 908 aaKnown RBP18.56■□□□□ 0.56
Col5a3-201ENSMUST00000004201 Rrp7aQ9D1C9 280 aaKnown RBP18.56■□□□□ 0.56
Col5a3-201ENSMUST00000004201 Ercc6F8VPZ5 1481 aa18.56■□□□□ 0.56
Col5a3-201ENSMUST00000004201 NgefQ8CHT1 710 aa18.55■□□□□ 0.56
Col5a3-201ENSMUST00000004201 Rtn4Q99P72 1162 aaKnown RBP18.55■□□□□ 0.56
Col5a3-201ENSMUST00000004201 Clstn1Q9EPL2 979 aa18.54■□□□□ 0.56
Col5a3-201ENSMUST00000004201 MsnP26041 577 aaKnown RBP18.53■□□□□ 0.56
Col5a3-201ENSMUST00000004201 Stk24Q99KH8 431 aa18.53■□□□□ 0.56
Col5a3-201ENSMUST00000004201 Mtus2Q3UHD3 1353 aa18.51■□□□□ 0.55
Col5a3-201ENSMUST00000004201 Ccdc18Q640L5 1455 aa18.51■□□□□ 0.55
Col5a3-201ENSMUST00000004201 Stag3O70576 1240 aa18.51■□□□□ 0.55
Col5a3-201ENSMUST00000004201 Mak16Q8BGS0 296 aaKnown RBP18.51■□□□□ 0.55
Col5a3-201ENSMUST00000004201 Calcoco2A2A6M5 331 aa18.49■□□□□ 0.55
Col5a3-201ENSMUST00000004201 1700019A02RikA0A087WPV9 146 aa18.48■□□□□ 0.55
Col5a3-201ENSMUST00000004201 Slc4a3P16283 1227 aa18.47■□□□□ 0.55
Col5a3-201ENSMUST00000004201 Taok2Q6ZQ29 1240 aa18.46■□□□□ 0.55
Col5a3-201ENSMUST00000004201 Cnga1P29974 684 aa18.46■□□□□ 0.55
Col5a3-201ENSMUST00000004201 Pes1Q9EQ61 584 aaKnown RBP18.46■□□□□ 0.55
Col5a3-201ENSMUST00000004201 Chmp4bQ9D8B3 224 aaKnown RBP18.45■□□□□ 0.54
Col5a3-201ENSMUST00000004201 Hsp90b1P08113 802 aaKnown RBP18.42■□□□□ 0.54
Col5a3-201ENSMUST00000004201 Iqcf3Q9D498 203 aa18.41■□□□□ 0.54
Col5a3-201ENSMUST00000004201 NudcO35685 332 aaKnown RBP18.4■□□□□ 0.54
Col5a3-201ENSMUST00000004201 Rrp12Q6P5B0 1295 aaKnown RBP18.4■□□□□ 0.54
Col5a3-201ENSMUST00000004201 KnstrnQ9D9Z1 312 aaKnown RBP18.4■□□□□ 0.54
Col5a3-201ENSMUST00000004201 Mbd3Q9Z2D8 285 aaKnown RBP18.4■□□□□ 0.54
Col5a3-201ENSMUST00000004201 Gm973E9Q295 1059 aa18.4■□□□□ 0.54
Col5a3-201ENSMUST00000004201 Tcerg1Q8CGF7 1100 aaKnown RBP18.4■□□□□ 0.54
Col5a3-201ENSMUST00000004201 Pcmtd1P59913 357 aa18.39■□□□□ 0.53
Col5a3-201ENSMUST00000004201 Dnai1Q8C0M8 701 aa18.39■□□□□ 0.53
Col5a3-201ENSMUST00000004201 MyclP10166 368 aa18.39■□□□□ 0.53
Col5a3-201ENSMUST00000004201 MccE9PWI3 1003 aa18.38■□□□□ 0.53
Col5a3-201ENSMUST00000004201 Mia2Q91ZV0 1396 aa18.38■□□□□ 0.53
Col5a3-201ENSMUST00000004201 Wwc2Q6NXJ0 1187 aa18.37■□□□□ 0.53
Col5a3-201ENSMUST00000004201 Supt16hQ920B9 1047 aa18.37■□□□□ 0.53
Col5a3-201ENSMUST00000004201 Ipo9Q91YE6 1041 aa18.37■□□□□ 0.53
Col5a3-201ENSMUST00000004201 Hspa5P20029 655 aaKnown RBP18.37■□□□□ 0.53
Retrieved 100 of 22,080 RNA–protein pairs in 16.3 ms