RNA–Protein interactions for RNA: YLR440C

SEC39, Transcript of Component of the Dsl1p tethering complex, yeast

Gene SEC39, Length 2,130 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SEC39	YLR440C	MTG2	P38860	518 aa		5.17	□□□□□ -1.58
SEC39	YLR440C	FYV10	P40492	516 aa		5.17	□□□□□ -1.58
SEC39	YLR440C	CIN5	P40917	295 aa		5.17	□□□□□ -1.58
SEC39	YLR440C	BRE2	P43132	505 aa		5.17	□□□□□ -1.58
SEC39	YLR440C	PMT3	P47190	753 aa		5.17	□□□□□ -1.58
SEC39	YLR440C	ASE1	P50275	885 aa		5.17	□□□□□ -1.58
SEC39	YLR440C	YGL117W	P53133	265 aa		5.17	□□□□□ -1.58
SEC39	YLR440C	PIB2	P53191	635 aa		5.17	□□□□□ -1.58
SEC39	YLR440C	ARC35	P53731	342 aa	Known RBP	5.17	□□□□□ -1.58
SEC39	YLR440C	YNL108C	P53929	270 aa		5.17	□□□□□ -1.58
SEC39	YLR440C	SLT2	Q00772	484 aa		5.17	□□□□□ -1.58
SEC39	YLR440C	TOF2	Q02208	771 aa		5.17	□□□□□ -1.58
SEC39	YLR440C	MUK1	Q02866	612 aa		5.17	□□□□□ -1.58
SEC39	YLR440C	CLU1	Q03690	1277 aa	Known RBP	5.17	□□□□□ -1.58
SEC39	YLR440C	USA1	Q03714	838 aa		5.17	□□□□□ -1.58
SEC39	YLR440C	HMO1	Q03973	246 aa	Known RBP	5.17	□□□□□ -1.58
SEC39	YLR440C	SSL1	Q04673	461 aa	Predicted RBP	5.17	□□□□□ -1.58
SEC39	YLR440C	ISR1	Q06098	443 aa	Known RBP	5.17	□□□□□ -1.58
SEC39	YLR440C	PIG1	Q06216	648 aa		5.17	□□□□□ -1.58
SEC39	YLR440C	ARO10	Q06408	635 aa		5.17	□□□□□ -1.58
SEC39	YLR440C	BRE4	Q07660	1125 aa		5.17	□□□□□ -1.58
SEC39	YLR440C	CMS1	Q07897	291 aa	Known RBP	5.17	□□□□□ -1.58
SEC39	YLR440C	YEH2	Q07950	538 aa		5.17	□□□□□ -1.58
SEC39	YLR440C	SGO1	Q08490	590 aa		5.17	□□□□□ -1.58
SEC39	YLR440C	GRE2	Q12068	342 aa	Known RBP	5.17	□□□□□ -1.58
SEC39	YLR440C	TY3A-G	Q12173	290 aa		5.17	□□□□□ -1.58
SEC39	YLR440C	TAH18	Q12181	623 aa		5.17	□□□□□ -1.58
SEC39	YLR440C	TY3A-I	Q99219	290 aa		5.17	□□□□□ -1.58
SEC39	YLR440C	CDC19	P00549	500 aa	Known RBP	5.16	□□□□□ -1.58
SEC39	YLR440C	CPA2	P03965	1118 aa	Known RBP	5.16	□□□□□ -1.58
SEC39	YLR440C	SEC63	P14906	663 aa		5.16	□□□□□ -1.58
SEC39	YLR440C	NAM9	P27929	486 aa		5.16	□□□□□ -1.58
SEC39	YLR440C	CBF2	P32504	956 aa		5.16	□□□□□ -1.58
SEC39	YLR440C	MRPL17	P36528	281 aa		5.16	□□□□□ -1.58
SEC39	YLR440C	GRS1	P38088	690 aa	Known RBP	5.16	□□□□□ -1.58
SEC39	YLR440C	FZO1	P38297	855 aa		5.16	□□□□□ -1.58
SEC39	YLR440C	CBR1	P38626	284 aa	Known RBP	5.16	□□□□□ -1.58
SEC39	YLR440C	APM2	P38700	605 aa		5.16	□□□□□ -1.58
SEC39	YLR440C	DYS1	P38791	387 aa		5.16	□□□□□ -1.58
SEC39	YLR440C	SSO2	P39926	295 aa		5.16	□□□□□ -1.58
SEC39	YLR440C	YEL023C	P39992	682 aa		5.16	□□□□□ -1.58
SEC39	YLR440C	YER186C	P40101	306 aa		5.16	□□□□□ -1.58
SEC39	YLR440C	SHQ1	P40486	507 aa	Predicted RBP	5.16	□□□□□ -1.58
SEC39	YLR440C	YJR098C	P47139	656 aa		5.16	□□□□□ -1.58
SEC39	YLR440C	BPL1	P48445	690 aa	Predicted RBP	5.16	□□□□□ -1.58
SEC39	YLR440C	LCL3	P53153	274 aa		5.16	□□□□□ -1.58
SEC39	YLR440C	RBG2	P53295	368 aa	Known RBP	5.16	□□□□□ -1.58
SEC39	YLR440C	TIM50	Q02776	476 aa		5.16	□□□□□ -1.58
SEC39	YLR440C	SRC1	Q03707	834 aa		5.16	□□□□□ -1.58
SEC39	YLR440C	TAF12	Q03761	539 aa		5.16	□□□□□ -1.58
SEC39	YLR440C	TDA9	Q04545	1251 aa		5.16	□□□□□ -1.58
SEC39	YLR440C	MCM21	Q06675	368 aa		5.16	□□□□□ -1.58
SEC39	YLR440C	DAS2	Q12084	232 aa		5.16	□□□□□ -1.58
SEC39	YLR440C	DIN7	Q12086	430 aa		5.16	□□□□□ -1.58
SEC39	YLR440C	AEP3	Q12089	606 aa		5.16	□□□□□ -1.58
SEC39	YLR440C	MDY2	Q12285	212 aa		5.16	□□□□□ -1.58
SEC39	YLR440C	MMP1	Q12372	583 aa		5.16	□□□□□ -1.58
SEC39	YLR440C	SRF1	Q12516	437 aa		5.16	□□□□□ -1.58
SEC39	YLR440C	AUS1	Q08409	1394 aa		5.16	□□□□□ -1.58
SEC39	YLR440C	PDE2	P06776	526 aa		5.15	□□□□□ -1.58
SEC39	YLR440C	OSM1	P21375	501 aa	Known RBP	5.15	□□□□□ -1.58
SEC39	YLR440C	DBP2	P24783	546 aa	Known RBP	5.15	□□□□□ -1.58
SEC39	YLR440C	YBR071W	P38243	211 aa		5.15	□□□□□ -1.58
SEC39	YLR440C	UBS1	P38290	277 aa		5.15	□□□□□ -1.58
SEC39	YLR440C	SUR2	P38992	349 aa		5.15	□□□□□ -1.58
SEC39	YLR440C	NUP60	P39705	539 aa		5.15	□□□□□ -1.58
SEC39	YLR440C	ALG5	P40350	334 aa		5.15	□□□□□ -1.58
SEC39	YLR440C	RRD1	P40454	393 aa	Known RBP	5.15	□□□□□ -1.58
SEC39	YLR440C	TED1	P40533	473 aa		5.15	□□□□□ -1.58
SEC39	YLR440C	CEP3	P40969	608 aa		5.15	□□□□□ -1.58
SEC39	YLR440C	MRPL19	P53875	158 aa		5.15	□□□□□ -1.58
SEC39	YLR440C	SAM50	P53969	484 aa		5.15	□□□□□ -1.58
SEC39	YLR440C	ALO1	P54783	526 aa	Known RBP	5.15	□□□□□ -1.58
SEC39	YLR440C	PEX25	Q02969	394 aa		5.15	□□□□□ -1.58
SEC39	YLR440C	IRC4	Q03036	179 aa		5.15	□□□□□ -1.58
SEC39	YLR440C	RMD1	Q03441	430 aa		5.15	□□□□□ -1.58
SEC39	YLR440C	BSC2	Q05611	235 aa		5.15	□□□□□ -1.58
SEC39	YLR440C	MRL1	Q06815	381 aa		5.15	□□□□□ -1.58
SEC39	YLR440C	YDL114W	Q07530	308 aa		5.15	□□□□□ -1.58
SEC39	YLR440C	SIL1	Q08199	421 aa		5.15	□□□□□ -1.58
SEC39	YLR440C	YOL036W	Q08206	761 aa		5.15	□□□□□ -1.58
SEC39	YLR440C	MET7	Q08645	548 aa		5.15	□□□□□ -1.58
SEC39	YLR440C	GYP5	Q12344	894 aa		5.15	□□□□□ -1.58
SEC39	YLR440C	MET3	P08536	511 aa		5.15	□□□□□ -1.59
SEC39	YLR440C	POL3	P15436	1097 aa		5.15	□□□□□ -1.59
SEC39	YLR440C	PDX1	P16451	410 aa		5.15	□□□□□ -1.59
SEC39	YLR440C	APA1	P16550	321 aa	Known RBP	5.15	□□□□□ -1.59
SEC39	YLR440C	SED4	P25365	1065 aa		5.15	□□□□□ -1.59
SEC39	YLR440C	PET309	P32522	965 aa	Predicted RBP	5.15	□□□□□ -1.59
SEC39	YLR440C	MSN4	P33749	630 aa		5.15	□□□□□ -1.59
SEC39	YLR440C	TGL4	P36165	910 aa		5.15	□□□□□ -1.59
SEC39	YLR440C	YBL036C	P38197	257 aa		5.15	□□□□□ -1.59
SEC39	YLR440C	BMT2	P38278	337 aa		5.15	□□□□□ -1.59
SEC39	YLR440C	SWC5	P38326	303 aa		5.15	□□□□□ -1.59
SEC39	YLR440C	DLD2	P46681	530 aa	Known RBP	5.15	□□□□□ -1.59
SEC39	YLR440C	LIF1	P53150	421 aa		5.15	□□□□□ -1.59
SEC39	YLR440C	MEP3	P53390	489 aa		5.15	□□□□□ -1.59
SEC39	YLR440C	HDA1	P53973	706 aa		5.15	□□□□□ -1.59
SEC39	YLR440C	KTR6	P54070	446 aa		5.15	□□□□□ -1.59
SEC39	YLR440C	TFB2	Q02939	513 aa		5.15	□□□□□ -1.59

Retrieved 100 of 5,963 RNA–protein pairs in 49.5 ms