Protein–RNA interactions for Protein: P53390

MEP3, Ammonium transporter MEP3, yeastyeast

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MEP3P53390 NSR1YGR159C 1245 nt18.74■□□□□ 0.59
MEP3P53390 YML009W-BYML009W-B 477 nt18.66■□□□□ 0.58
MEP3P53390 NOP1YDL014W 984 nt18.01■□□□□ 0.47
MEP3P53390 MDJ1YFL016C 1536 nt16.88■□□□□ 0.29
MEP3P53390 YKL036CYKL036C 393 nt16.43■□□□□ 0.22
MEP3P53390 SRX1YKL086W 384 nt15.77■□□□□ 0.12
MEP3P53390 Q0297Q0297 156 nt15.73■□□□□ 0.11
MEP3P53390 YJL027CYJL027C 417 nt15.53■□□□□ 0.08
MEP3P53390 YCR051WYCR051W 669 nt14.93□□□□□ -0.02
MEP3P53390 DBP2YNL112W 1641 nt14.88□□□□□ -0.03
MEP3P53390 SCS3YGL126W 1143 nt14.85□□□□□ -0.03
MEP3P53390 YBR190WYBR190W 312 nt14.44□□□□□ -0.1
MEP3P53390 TRN1tP(UGG)A 72 nt14.41□□□□□ -0.1
MEP3P53390 SUF9tP(UGG)F 72 nt14.41□□□□□ -0.1
MEP3P53390 SUF8tP(UGG)H 72 nt14.41□□□□□ -0.1
MEP3P53390 tP(UGG)LtP(UGG)L 72 nt14.41□□□□□ -0.1
MEP3P53390 SUF7tP(UGG)M 72 nt14.41□□□□□ -0.1
MEP3P53390 tP(UGG)N1tP(UGG)N1 72 nt14.41□□□□□ -0.1
MEP3P53390 tP(UGG)N2tP(UGG)N2 72 nt14.41□□□□□ -0.1
MEP3P53390 tP(UGG)O1tP(UGG)O1 72 nt14.41□□□□□ -0.1
MEP3P53390 SUF11tP(UGG)O2 72 nt14.41□□□□□ -0.1
MEP3P53390 YOL085CYOL085C 342 nt14.26□□□□□ -0.13
MEP3P53390 CCC1YLR220W 969 nt14.24□□□□□ -0.13
MEP3P53390 RPP1BYDL130W 321 nt14.11□□□□□ -0.15
MEP3P53390 RTC3YHR087W 336 nt14.08□□□□□ -0.16
MEP3P53390 PKP1YIL042C 1185 nt14.07□□□□□ -0.16
MEP3P53390 RVS167YDR388W 1449 nt13.86□□□□□ -0.19
MEP3P53390 SCJ1YMR214W 1134 nt13.81□□□□□ -0.2
MEP3P53390 Q0182Q0182 405 nt13.58□□□□□ -0.24
MEP3P53390 tP(UGG)O3tP(UGG)O3 72 nt13.55□□□□□ -0.24
MEP3P53390 PET122YER153C 765 nt13.52□□□□□ -0.25
MEP3P53390 SHR5YOL110W 714 nt13.35□□□□□ -0.27
MEP3P53390 PUT4YOR348C 1884 nt13.33□□□□□ -0.28
MEP3P53390 SCR1SCR1 522 nt13.27□□□□□ -0.29
MEP3P53390 ATS1YAL020C 1002 nt13.22□□□□□ -0.29
MEP3P53390 SSA3YBL075C 1950 nt13.2□□□□□ -0.3
MEP3P53390 URN1YPR152C 1398 nt13.12□□□□□ -0.31
MEP3P53390 RRN5YLR141W 1092 nt13.1□□□□□ -0.31
MEP3P53390 YDJ1YNL064C 1230 nt13.1□□□□□ -0.31
MEP3P53390 DEP1YAL013W 1218 nt13.06□□□□□ -0.32
MEP3P53390 ARE1YCR048W 1833 nt13.02□□□□□ -0.32
MEP3P53390 MOT3YMR070W 1473 nt12.98□□□□□ -0.33
MEP3P53390 OPI9YLR338W 858 nt12.98□□□□□ -0.33
MEP3P53390 SAH1YER043C 1350 nt12.96□□□□□ -0.33
MEP3P53390 POA1YBR022W 534 nt12.87□□□□□ -0.35
MEP3P53390 GAR1YHR089C 618 nt12.85□□□□□ -0.35
MEP3P53390 YER088W-BYER088W-B 147 nt12.84□□□□□ -0.35
MEP3P53390 RPN10YHR200W 807 nt12.84□□□□□ -0.35
MEP3P53390 YHR049C-AYHR049C-A 297 nt12.82□□□□□ -0.36
MEP3P53390 YNL208WYNL208W 600 nt12.81□□□□□ -0.36
MEP3P53390 RSB1YOR049C 1065 nt12.75□□□□□ -0.37
MEP3P53390 BSC6YOL137W 1494 nt12.64□□□□□ -0.39
MEP3P53390 PUN1YLR414C 792 nt12.59□□□□□ -0.39
MEP3P53390 YJR018WYJR018W 363 nt12.5□□□□□ -0.41
MEP3P53390 PTC2YER089C 1395 nt12.49□□□□□ -0.41
MEP3P53390 BUD23YCR047C 828 nt12.49□□□□□ -0.41
MEP3P53390 TIR1YER011W 765 nt12.43□□□□□ -0.42
MEP3P53390 NAB2YGL122C 1578 nt12.35□□□□□ -0.43
MEP3P53390 SSA1YAL005C 1929 nt12.35□□□□□ -0.43
MEP3P53390 YJR120WYJR120W 351 nt12.31□□□□□ -0.44
MEP3P53390 PST2YDR032C 597 nt12.29□□□□□ -0.44
MEP3P53390 SPT5YML010W 3192 nt12.29□□□□□ -0.44
MEP3P53390 FIS1YIL065C 468 nt12.18□□□□□ -0.46
MEP3P53390 RPP2BYDR382W 333 nt12.16□□□□□ -0.46
MEP3P53390 DAL1YIR027C 1383 nt12.15□□□□□ -0.46
MEP3P53390 SRB2YHR041C 633 nt12.14□□□□□ -0.47
MEP3P53390 FPR4YLR449W 1179 nt12.1□□□□□ -0.47
MEP3P53390 INM2YDR287W 879 nt12.07□□□□□ -0.48
MEP3P53390 PHO4YFR034C 939 nt12.04□□□□□ -0.48
MEP3P53390 YBL100CYBL100C 315 nt11.93□□□□□ -0.5
MEP3P53390 BDH2YAL061W 1254 nt11.9□□□□□ -0.5
MEP3P53390 YPS1YLR120C 1710 nt11.9□□□□□ -0.5
MEP3P53390 SSA4YER103W 1929 nt11.9□□□□□ -0.51
MEP3P53390 MEP2YNL142W 1500 nt11.89□□□□□ -0.51
MEP3P53390 WWM1YFL010C 636 nt11.86□□□□□ -0.51
MEP3P53390 SHU1YHL006C 453 nt11.85□□□□□ -0.51
MEP3P53390 FUN26YAL022C 1554 nt11.79□□□□□ -0.52
MEP3P53390 YDR095CYDR095C 411 nt11.78□□□□□ -0.52
MEP3P53390 YHR165W-AYHR165W-A 312 nt11.75□□□□□ -0.53
MEP3P53390 YAL037C-BYAL037C-B 975 nt11.73□□□□□ -0.53
MEP3P53390 DCW1YKL046C 1350 nt11.71□□□□□ -0.53
MEP3P53390 TRM9YML014W 840 nt11.71□□□□□ -0.53
MEP3P53390 LSM3YLR438C-A 270 nt11.7□□□□□ -0.54
MEP3P53390 YGR021WYGR021W 873 nt11.68□□□□□ -0.54
MEP3P53390 HOM6YJR139C 1080 nt11.66□□□□□ -0.54
MEP3P53390 YFL021C-AYFL021C-A 855 nt11.65□□□□□ -0.54
MEP3P53390 YKL097CYKL097C 411 nt11.64□□□□□ -0.55
MEP3P53390 ALF1YNL148C 765 nt11.63□□□□□ -0.55
MEP3P53390 CCT6YDR188W 1641 nt11.62□□□□□ -0.55
MEP3P53390 MNP1YGL068W 585 nt11.58□□□□□ -0.56
MEP3P53390 PTP1YDL230W 1008 nt11.57□□□□□ -0.56
MEP3P53390 RPP2AYOL039W 321 nt11.55□□□□□ -0.56
MEP3P53390 EMI2YDR516C 1503 nt11.54□□□□□ -0.56
MEP3P53390 SIS1YNL007C 1059 nt11.51□□□□□ -0.57
MEP3P53390 CAC2YML102W 1407 nt11.51□□□□□ -0.57
MEP3P53390 SUF2tP(AGG)C 72 nt11.5□□□□□ -0.57
MEP3P53390 SUF10tP(AGG)N 72 nt11.5□□□□□ -0.57
MEP3P53390 BDF1YLR399C 2061 nt11.48□□□□□ -0.57
MEP3P53390 RKM5YLR137W 1104 nt11.48□□□□□ -0.57
MEP3P53390 YDL221WYDL221W 552 nt11.44□□□□□ -0.58
Retrieved 100 of 7,029 protein–RNA pairs in 186 ms