Protein–RNA interactions for Protein: P38326

SWC5, SWR1-complex protein 5, yeastyeast

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SWC5P38326 YML009W-BYML009W-B 477 nt21.36■■□□□ 1.01
SWC5P38326 NSR1YGR159C 1245 nt21.27■■□□□ 1
SWC5P38326 NOP1YDL014W 984 nt20.72■□□□□ 0.91
SWC5P38326 YKL036CYKL036C 393 nt19.05■□□□□ 0.64
SWC5P38326 MDJ1YFL016C 1536 nt18.97■□□□□ 0.63
SWC5P38326 Q0297Q0297 156 nt18.09■□□□□ 0.49
SWC5P38326 SRX1YKL086W 384 nt18.09■□□□□ 0.49
SWC5P38326 YJL027CYJL027C 417 nt17.79■□□□□ 0.44
SWC5P38326 SCS3YGL126W 1143 nt17.29■□□□□ 0.36
SWC5P38326 YCR051WYCR051W 669 nt17.2■□□□□ 0.34
SWC5P38326 DBP2YNL112W 1641 nt16.73■□□□□ 0.27
SWC5P38326 YOL085CYOL085C 342 nt16.51■□□□□ 0.23
SWC5P38326 TRN1tP(UGG)A 72 nt16.39■□□□□ 0.21
SWC5P38326 SUF9tP(UGG)F 72 nt16.39■□□□□ 0.21
SWC5P38326 SUF8tP(UGG)H 72 nt16.39■□□□□ 0.21
SWC5P38326 tP(UGG)LtP(UGG)L 72 nt16.39■□□□□ 0.21
SWC5P38326 SUF7tP(UGG)M 72 nt16.39■□□□□ 0.21
SWC5P38326 tP(UGG)N1tP(UGG)N1 72 nt16.39■□□□□ 0.21
SWC5P38326 tP(UGG)N2tP(UGG)N2 72 nt16.39■□□□□ 0.21
SWC5P38326 tP(UGG)O1tP(UGG)O1 72 nt16.39■□□□□ 0.21
SWC5P38326 SUF11tP(UGG)O2 72 nt16.39■□□□□ 0.21
SWC5P38326 PKP1YIL042C 1185 nt16.29■□□□□ 0.2
SWC5P38326 CCC1YLR220W 969 nt16.28■□□□□ 0.2
SWC5P38326 RPP1BYDL130W 321 nt16.25■□□□□ 0.19
SWC5P38326 YBR190WYBR190W 312 nt16.18■□□□□ 0.18
SWC5P38326 RTC3YHR087W 336 nt15.86■□□□□ 0.13
SWC5P38326 RVS167YDR388W 1449 nt15.75■□□□□ 0.11
SWC5P38326 SCJ1YMR214W 1134 nt15.63■□□□□ 0.09
SWC5P38326 PET122YER153C 765 nt15.54■□□□□ 0.08
SWC5P38326 tP(UGG)O3tP(UGG)O3 72 nt15.51■□□□□ 0.07
SWC5P38326 ATS1YAL020C 1002 nt15.45■□□□□ 0.06
SWC5P38326 SCR1SCR1 522 nt15.36■□□□□ 0.05
SWC5P38326 SHR5YOL110W 714 nt15.16■□□□□ 0.02
SWC5P38326 RRN5YLR141W 1092 nt15.1■□□□□ 0.01
SWC5P38326 YDJ1YNL064C 1230 nt14.98□□□□□ -0.01
SWC5P38326 URN1YPR152C 1398 nt14.8□□□□□ -0.04
SWC5P38326 YER088W-BYER088W-B 147 nt14.79□□□□□ -0.04
SWC5P38326 DEP1YAL013W 1218 nt14.79□□□□□ -0.04
SWC5P38326 RSB1YOR049C 1065 nt14.77□□□□□ -0.05
SWC5P38326 SSA3YBL075C 1950 nt14.75□□□□□ -0.05
SWC5P38326 PUT4YOR348C 1884 nt14.74□□□□□ -0.05
SWC5P38326 GAR1YHR089C 618 nt14.7□□□□□ -0.06
SWC5P38326 OPI9YLR338W 858 nt14.58□□□□□ -0.08
SWC5P38326 RPN10YHR200W 807 nt14.56□□□□□ -0.08
SWC5P38326 YNL208WYNL208W 600 nt14.53□□□□□ -0.08
SWC5P38326 SAH1YER043C 1350 nt14.52□□□□□ -0.08
SWC5P38326 ARE1YCR048W 1833 nt14.45□□□□□ -0.1
SWC5P38326 PST2YDR032C 597 nt14.31□□□□□ -0.12
SWC5P38326 POA1YBR022W 534 nt14.3□□□□□ -0.12
SWC5P38326 YHR049C-AYHR049C-A 297 nt14.28□□□□□ -0.12
SWC5P38326 TIR1YER011W 765 nt14.19□□□□□ -0.14
SWC5P38326 PUN1YLR414C 792 nt14.16□□□□□ -0.14
SWC5P38326 YJR018WYJR018W 363 nt14.11□□□□□ -0.15
SWC5P38326 SSA1YAL005C 1929 nt14.03□□□□□ -0.16
SWC5P38326 PTC2YER089C 1395 nt14.01□□□□□ -0.17
SWC5P38326 BSC6YOL137W 1494 nt13.99□□□□□ -0.17
SWC5P38326 BUD23YCR047C 828 nt13.97□□□□□ -0.17
SWC5P38326 YJR120WYJR120W 351 nt13.85□□□□□ -0.19
SWC5P38326 NAB2YGL122C 1578 nt13.83□□□□□ -0.2
SWC5P38326 RPP2BYDR382W 333 nt13.81□□□□□ -0.2
SWC5P38326 SRB2YHR041C 633 nt13.78□□□□□ -0.2
SWC5P38326 SHU1YHL006C 453 nt13.76□□□□□ -0.21
SWC5P38326 YKL097CYKL097C 411 nt13.72□□□□□ -0.21
SWC5P38326 FPR4YLR449W 1179 nt13.64□□□□□ -0.23
SWC5P38326 DAL1YIR027C 1383 nt13.63□□□□□ -0.23
SWC5P38326 INM2YDR287W 879 nt13.61□□□□□ -0.23
SWC5P38326 FIS1YIL065C 468 nt13.6□□□□□ -0.23
SWC5P38326 YAL037C-BYAL037C-B 975 nt13.6□□□□□ -0.23
SWC5P38326 WWM1YFL010C 636 nt13.57□□□□□ -0.24
SWC5P38326 PHO4YFR034C 939 nt13.5□□□□□ -0.25
SWC5P38326 BDH2YAL061W 1254 nt13.5□□□□□ -0.25
SWC5P38326 YBL100CYBL100C 315 nt13.47□□□□□ -0.25
SWC5P38326 YGR021WYGR021W 873 nt13.45□□□□□ -0.26
SWC5P38326 HOM6YJR139C 1080 nt13.39□□□□□ -0.27
SWC5P38326 MNP1YGL068W 585 nt13.34□□□□□ -0.27
SWC5P38326 YFL021C-AYFL021C-A 855 nt13.33□□□□□ -0.28
SWC5P38326 FUN26YAL022C 1554 nt13.32□□□□□ -0.28
SWC5P38326 SPT5YML010W 3192 nt13.31□□□□□ -0.28
SWC5P38326 LSM3YLR438C-A 270 nt13.31□□□□□ -0.28
SWC5P38326 TRM9YML014W 840 nt13.29□□□□□ -0.28
SWC5P38326 YPS1YLR120C 1710 nt13.25□□□□□ -0.29
SWC5P38326 RKM5YLR137W 1104 nt13.2□□□□□ -0.3
SWC5P38326 YOR139CYOR139C 393 nt13.17□□□□□ -0.3
SWC5P38326 YDR095CYDR095C 411 nt13.16□□□□□ -0.3
SWC5P38326 YHR165W-AYHR165W-A 312 nt13.15□□□□□ -0.3
SWC5P38326 ALF1YNL148C 765 nt13.15□□□□□ -0.3
SWC5P38326 CCT6YDR188W 1641 nt13.13□□□□□ -0.31
SWC5P38326 MEP2YNL142W 1500 nt13.13□□□□□ -0.31
SWC5P38326 NPL3YDR432W 1245 nt13.1□□□□□ -0.31
SWC5P38326 YOL037CYOL037C 354 nt13.06□□□□□ -0.32
SWC5P38326 SUF2tP(AGG)C 72 nt13.04□□□□□ -0.32
SWC5P38326 SUF10tP(AGG)N 72 nt13.04□□□□□ -0.32
SWC5P38326 DCW1YKL046C 1350 nt12.94□□□□□ -0.34
SWC5P38326 RPP2AYOL039W 321 nt12.93□□□□□ -0.34
SWC5P38326 SIS1YNL007C 1059 nt12.92□□□□□ -0.34
SWC5P38326 SSA4YER103W 1929 nt12.88□□□□□ -0.35
SWC5P38326 PTP1YDL230W 1008 nt12.87□□□□□ -0.35
SWC5P38326 CAC2YML102W 1407 nt12.79□□□□□ -0.36
SWC5P38326 EMI2YDR516C 1503 nt12.78□□□□□ -0.36
SWC5P38326 YLR154C-GYLR154C-G 150 nt12.77□□□□□ -0.37
Retrieved 100 of 7,029 protein–RNA pairs in 12.5 ms