Protein–RNA interactions for Protein: P32504

CBF2, Centromere DNA-binding protein complex CBF3 subunit A, yeastyeast

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CBF2P32504 YML009W-BYML009W-B 477 nt21.91■■□□□ 1.1
CBF2P32504 NSR1YGR159C 1245 nt21.85■■□□□ 1.09
CBF2P32504 NOP1YDL014W 984 nt21.35■■□□□ 1.01
CBF2P32504 YKL036CYKL036C 393 nt19.71■□□□□ 0.75
CBF2P32504 MDJ1YFL016C 1536 nt19.33■□□□□ 0.68
CBF2P32504 Q0297Q0297 156 nt18.76■□□□□ 0.59
CBF2P32504 SRX1YKL086W 384 nt18.69■□□□□ 0.58
CBF2P32504 YJL027CYJL027C 417 nt18.36■□□□□ 0.53
CBF2P32504 SCS3YGL126W 1143 nt17.97■□□□□ 0.47
CBF2P32504 YCR051WYCR051W 669 nt17.64■□□□□ 0.41
CBF2P32504 DBP2YNL112W 1641 nt17.21■□□□□ 0.35
CBF2P32504 YOL085CYOL085C 342 nt17.09■□□□□ 0.33
CBF2P32504 TRN1tP(UGG)A 72 nt16.91■□□□□ 0.3
CBF2P32504 SUF9tP(UGG)F 72 nt16.91■□□□□ 0.3
CBF2P32504 SUF8tP(UGG)H 72 nt16.91■□□□□ 0.3
CBF2P32504 tP(UGG)LtP(UGG)L 72 nt16.91■□□□□ 0.3
CBF2P32504 SUF7tP(UGG)M 72 nt16.91■□□□□ 0.3
CBF2P32504 tP(UGG)N1tP(UGG)N1 72 nt16.91■□□□□ 0.3
CBF2P32504 tP(UGG)N2tP(UGG)N2 72 nt16.91■□□□□ 0.3
CBF2P32504 tP(UGG)O1tP(UGG)O1 72 nt16.91■□□□□ 0.3
CBF2P32504 SUF11tP(UGG)O2 72 nt16.91■□□□□ 0.3
CBF2P32504 RPP1BYDL130W 321 nt16.8■□□□□ 0.28
CBF2P32504 PKP1YIL042C 1185 nt16.76■□□□□ 0.27
CBF2P32504 CCC1YLR220W 969 nt16.61■□□□□ 0.25
CBF2P32504 YBR190WYBR190W 312 nt16.53■□□□□ 0.24
CBF2P32504 RVS167YDR388W 1449 nt16.08■□□□□ 0.16
CBF2P32504 ATS1YAL020C 1002 nt16.07■□□□□ 0.16
CBF2P32504 SCJ1YMR214W 1134 nt16.07■□□□□ 0.16
CBF2P32504 RTC3YHR087W 336 nt16.05■□□□□ 0.16
CBF2P32504 PET122YER153C 765 nt16.03■□□□□ 0.16
CBF2P32504 tP(UGG)O3tP(UGG)O3 72 nt15.97■□□□□ 0.15
CBF2P32504 SCR1SCR1 522 nt15.83■□□□□ 0.12
CBF2P32504 SHR5YOL110W 714 nt15.58■□□□□ 0.08
CBF2P32504 RRN5YLR141W 1092 nt15.55■□□□□ 0.08
CBF2P32504 YDJ1YNL064C 1230 nt15.48■□□□□ 0.07
CBF2P32504 SSA3YBL075C 1950 nt15.36■□□□□ 0.05
CBF2P32504 YER088W-BYER088W-B 147 nt15.28■□□□□ 0.04
CBF2P32504 RSB1YOR049C 1065 nt15.19■□□□□ 0.02
CBF2P32504 URN1YPR152C 1398 nt15.1■□□□□ 0.01
CBF2P32504 PUT4YOR348C 1884 nt15.04■□□□□ -0
CBF2P32504 GAR1YHR089C 618 nt15.04■□□□□ -0
CBF2P32504 DEP1YAL013W 1218 nt15.03■□□□□ -0
CBF2P32504 PST2YDR032C 597 nt14.92□□□□□ -0.02
CBF2P32504 OPI9YLR338W 858 nt14.92□□□□□ -0.02
CBF2P32504 YNL208WYNL208W 600 nt14.87□□□□□ -0.03
CBF2P32504 RPN10YHR200W 807 nt14.86□□□□□ -0.03
CBF2P32504 SAH1YER043C 1350 nt14.78□□□□□ -0.04
CBF2P32504 ARE1YCR048W 1833 nt14.78□□□□□ -0.04
CBF2P32504 TIR1YER011W 765 nt14.58□□□□□ -0.08
CBF2P32504 YHR049C-AYHR049C-A 297 nt14.5□□□□□ -0.09
CBF2P32504 POA1YBR022W 534 nt14.49□□□□□ -0.09
CBF2P32504 PUN1YLR414C 792 nt14.46□□□□□ -0.09
CBF2P32504 SSA1YAL005C 1929 nt14.44□□□□□ -0.1
CBF2P32504 YJR018WYJR018W 363 nt14.4□□□□□ -0.1
CBF2P32504 SHU1YHL006C 453 nt14.28□□□□□ -0.12
CBF2P32504 YJR120WYJR120W 351 nt14.28□□□□□ -0.12
CBF2P32504 YKL097CYKL097C 411 nt14.27□□□□□ -0.13
CBF2P32504 PTC2YER089C 1395 nt14.25□□□□□ -0.13
CBF2P32504 SRB2YHR041C 633 nt14.21□□□□□ -0.13
CBF2P32504 BSC6YOL137W 1494 nt14.19□□□□□ -0.14
CBF2P32504 NAB2YGL122C 1578 nt14.1□□□□□ -0.15
CBF2P32504 BUD23YCR047C 828 nt14.1□□□□□ -0.15
CBF2P32504 RPP2BYDR382W 333 nt14.09□□□□□ -0.15
CBF2P32504 YAL037C-BYAL037C-B 975 nt13.99□□□□□ -0.17
CBF2P32504 FIS1YIL065C 468 nt13.95□□□□□ -0.18
CBF2P32504 WWM1YFL010C 636 nt13.93□□□□□ -0.18
CBF2P32504 DAL1YIR027C 1383 nt13.92□□□□□ -0.18
CBF2P32504 INM2YDR287W 879 nt13.9□□□□□ -0.18
CBF2P32504 YGR021WYGR021W 873 nt13.89□□□□□ -0.19
CBF2P32504 BDH2YAL061W 1254 nt13.87□□□□□ -0.19
CBF2P32504 HOM6YJR139C 1080 nt13.86□□□□□ -0.19
CBF2P32504 PHO4YFR034C 939 nt13.79□□□□□ -0.2
CBF2P32504 FPR4YLR449W 1179 nt13.77□□□□□ -0.21
CBF2P32504 YBL100CYBL100C 315 nt13.76□□□□□ -0.21
CBF2P32504 YOR139CYOR139C 393 nt13.75□□□□□ -0.21
CBF2P32504 YFL021C-AYFL021C-A 855 nt13.74□□□□□ -0.21
CBF2P32504 MNP1YGL068W 585 nt13.74□□□□□ -0.21
CBF2P32504 LSM3YLR438C-A 270 nt13.72□□□□□ -0.21
CBF2P32504 SPT5YML010W 3192 nt13.71□□□□□ -0.21
CBF2P32504 RKM5YLR137W 1104 nt13.64□□□□□ -0.23
CBF2P32504 FUN26YAL022C 1554 nt13.62□□□□□ -0.23
CBF2P32504 SSA4YER103W 1929 nt13.56□□□□□ -0.24
CBF2P32504 YOL037CYOL037C 354 nt13.56□□□□□ -0.24
CBF2P32504 NPL3YDR432W 1245 nt13.55□□□□□ -0.24
CBF2P32504 TRM9YML014W 840 nt13.55□□□□□ -0.24
CBF2P32504 YPS1YLR120C 1710 nt13.55□□□□□ -0.24
CBF2P32504 CCT6YDR188W 1641 nt13.5□□□□□ -0.25
CBF2P32504 YDR095CYDR095C 411 nt13.47□□□□□ -0.25
CBF2P32504 MEP2YNL142W 1500 nt13.35□□□□□ -0.27
CBF2P32504 ALF1YNL148C 765 nt13.34□□□□□ -0.27
CBF2P32504 SUF2tP(AGG)C 72 nt13.32□□□□□ -0.28
CBF2P32504 SUF10tP(AGG)N 72 nt13.32□□□□□ -0.28
CBF2P32504 YHR165W-AYHR165W-A 312 nt13.31□□□□□ -0.28
CBF2P32504 YLR281CYLR281C 468 nt13.27□□□□□ -0.29
CBF2P32504 SIS1YNL007C 1059 nt13.26□□□□□ -0.29
CBF2P32504 tM(CAU)CtM(CAU)C 72 nt13.22□□□□□ -0.29
CBF2P32504 IMT4tM(CAU)E 72 nt13.22□□□□□ -0.29
CBF2P32504 IMT3tM(CAU)J3 72 nt13.22□□□□□ -0.29
CBF2P32504 IMT1tM(CAU)O1 72 nt13.22□□□□□ -0.29
CBF2P32504 IMT2tM(CAU)P 72 nt13.22□□□□□ -0.29
Retrieved 100 of 7,029 protein–RNA pairs in 14.5 ms