RNA–Protein interactions for RNA: YBL093C

ROX3, Transcript of Subunit of the RNA polymerase II mediator complex, yeast

Gene ROX3, Length 663 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ROX3	YBL093C	HUL4	P40985	892 aa		5.84	□□□□□ -1.47
ROX3	YBL093C	VPS75	P53853	264 aa		5.84	□□□□□ -1.47
ROX3	YBL093C	YDL057W	Q07379	328 aa		5.84	□□□□□ -1.47
ROX3	YBL093C	ISA1	Q07821	250 aa	Predicted RBP	5.84	□□□□□ -1.47
ROX3	YBL093C	TCO89	Q08921	799 aa		5.84	□□□□□ -1.47
ROX3	YBL093C	YLL058W	Q12198	575 aa		5.84	□□□□□ -1.47
ROX3	YBL093C	OSW2	Q12202	724 aa		5.84	□□□□□ -1.47
ROX3	YBL093C	TY1B-A	O13527	1196 aa	Known RBP	5.83	□□□□□ -1.48
ROX3	YBL093C	PFK1	P16861	987 aa	Known RBP	5.83	□□□□□ -1.48
ROX3	YBL093C	SPO11	P23179	398 aa		5.83	□□□□□ -1.48
ROX3	YBL093C	TSA1	P34760	196 aa	Known RBP	5.83	□□□□□ -1.48
ROX3	YBL093C	MCD4	P36051	919 aa		5.83	□□□□□ -1.48
ROX3	YBL093C	YKR018C	P36114	725 aa		5.83	□□□□□ -1.48
ROX3	YBL093C	PPS1	P38148	807 aa		5.83	□□□□□ -1.48
ROX3	YBL093C	CTM1	P38818	585 aa		5.83	□□□□□ -1.48
ROX3	YBL093C	NNF1	P47149	201 aa		5.83	□□□□□ -1.48
ROX3	YBL093C	YGL039W	P53183	348 aa	Known RBP	5.83	□□□□□ -1.48
ROX3	YBL093C	CNM67	P53865	581 aa	Known RBP	5.83	□□□□□ -1.48
ROX3	YBL093C	SEC5	P89102	971 aa		5.83	□□□□□ -1.48
ROX3	YBL093C	TLG2	Q08144	397 aa		5.83	□□□□□ -1.48
ROX3	YBL093C	YAP7	Q08182	245 aa		5.83	□□□□□ -1.48
ROX3	YBL093C	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	5.83	□□□□□ -1.48	not detected
ROX3	YBL093C	YPL216W	Q08964	1102 aa		5.83	□□□□□ -1.48
ROX3	YBL093C	CFT2	Q12102	859 aa	Predicted RBP	5.83	□□□□□ -1.48
ROX3	YBL093C	PGK1	P00560	416 aa	Known RBP	5.82	□□□□□ -1.48
ROX3	YBL093C	SRD1	P09007	221 aa		5.82	□□□□□ -1.48
ROX3	YBL093C	VMA2	P16140	517 aa	Known RBP	5.82	□□□□□ -1.48
ROX3	YBL093C	SEC65	P29478	273 aa		5.82	□□□□□ -1.48
ROX3	YBL093C	AAR2	P32357	355 aa	Predicted RBP	5.82	□□□□□ -1.48
ROX3	YBL093C	SAP190	P36123	1033 aa		5.82	□□□□□ -1.48
ROX3	YBL093C	MIP6	P38760	659 aa	Known RBP	5.82	□□□□□ -1.48
ROX3	YBL093C	LAM1	P38851	1228 aa		5.82	□□□□□ -1.48
ROX3	YBL093C	UBP5	P39944	805 aa		5.82	□□□□□ -1.48
ROX3	YBL093C	FIS1	P40515	155 aa		5.82	□□□□□ -1.48
ROX3	YBL093C	YJL049W	P47048	450 aa		5.82	□□□□□ -1.48
ROX3	YBL093C	HFM1	P51979	1187 aa		5.82	□□□□□ -1.48
ROX3	YBL093C	TPO2	P53283	614 aa		5.82	□□□□□ -1.48
ROX3	YBL093C	ROT1	Q03691	256 aa		5.82	□□□□□ -1.48
ROX3	YBL093C	CDA2	Q06703	312 aa		5.82	□□□□□ -1.48
ROX3	YBL093C	MDM38	Q08179	573 aa		5.82	□□□□□ -1.48
ROX3	YBL093C	ERP3	Q12403	225 aa		5.82	□□□□□ -1.48
ROX3	YBL093C	GAL10	P04397	699 aa		5.81	□□□□□ -1.48
ROX3	YBL093C	OM45	P16547	393 aa		5.81	□□□□□ -1.48
ROX3	YBL093C	PRP9	P19736	530 aa	Known RBP	5.81	□□□□□ -1.48
ROX3	YBL093C	TKL1	P23254	680 aa	Known RBP	5.81	□□□□□ -1.48
ROX3	YBL093C	RPC25	P35718	212 aa		5.81	□□□□□ -1.48
ROX3	YBL093C	AIM3	P38266	947 aa	Known RBP	5.81	□□□□□ -1.48
ROX3	YBL093C	RTT107	P38850	1070 aa		5.81	□□□□□ -1.48
ROX3	YBL093C	TOS3	P43637	560 aa		5.81	□□□□□ -1.48
ROX3	YBL093C	GUS1	P46655	708 aa	Known RBP RIP-Chip data	5.81	□□□□□ -1.48	not detected
ROX3	YBL093C	STU2	P46675	888 aa		5.81	□□□□□ -1.48
ROX3	YBL093C	NBP1	P52919	319 aa	Predicted RBP	5.81	□□□□□ -1.48
ROX3	YBL093C	YGR125W	P53273	1036 aa		5.81	□□□□□ -1.48
ROX3	YBL093C	ARK1	P53974	638 aa		5.81	□□□□□ -1.48
ROX3	YBL093C	MSC2	Q03455	724 aa		5.81	□□□□□ -1.48
ROX3	YBL093C	RBA50	Q04418	439 aa		5.81	□□□□□ -1.48
ROX3	YBL093C	COG4	Q06096	861 aa		5.81	□□□□□ -1.48
ROX3	YBL093C	APL4	Q12028	832 aa		5.81	□□□□□ -1.48
ROX3	YBL093C	LAA1	P39526	2014 aa		5.81	□□□□□ -1.48
ROX3	YBL093C	RIF1	P29539	1916 aa		5.8	□□□□□ -1.48
ROX3	YBL093C	ADE8	P04161	214 aa		5.8	□□□□□ -1.48
ROX3	YBL093C	RPS13	P05756	151 aa	Known RBP	5.8	□□□□□ -1.48
ROX3	YBL093C	PCK1	P10963	549 aa		5.8	□□□□□ -1.48
ROX3	YBL093C	DAL7	P21826	554 aa		5.8	□□□□□ -1.48
ROX3	YBL093C	CDC60	P26637	1090 aa	Known RBP	5.8	□□□□□ -1.48
ROX3	YBL093C	SPC110	P32380	944 aa		5.8	□□□□□ -1.48
ROX3	YBL093C	CDC12	P32468	407 aa	Known RBP	5.8	□□□□□ -1.48
ROX3	YBL093C	EUG1	P32474	517 aa		5.8	□□□□□ -1.48
ROX3	YBL093C	DBP7	P36120	742 aa	Known RBP	5.8	□□□□□ -1.48
ROX3	YBL093C	REG2	P38232	338 aa		5.8	□□□□□ -1.48
ROX3	YBL093C	SPT8	P38915	602 aa		5.8	□□□□□ -1.48
ROX3	YBL093C	MEF2	P39677	819 aa		5.8	□□□□□ -1.48
ROX3	YBL093C	PBP1	P53297	722 aa	Known RBP	5.8	□□□□□ -1.48
ROX3	YBL093C	ZPR1	P53303	486 aa	Known RBP	5.8	□□□□□ -1.48
ROX3	YBL093C	DUS4	Q06063	367 aa		5.8	□□□□□ -1.48
ROX3	YBL093C	CUR1	Q06469	252 aa		5.8	□□□□□ -1.48
ROX3	YBL093C	CRD1	Q07560	283 aa		5.8	□□□□□ -1.48
ROX3	YBL093C	FMP25	Q08023	583 aa		5.8	□□□□□ -1.48
ROX3	YBL093C	YPL277C	Q08989	487 aa		5.8	□□□□□ -1.48
ROX3	YBL093C	RIB2	Q12362	591 aa	Known RBP	5.8	□□□□□ -1.48
ROX3	YBL093C	OSH2	Q12451	1283 aa		5.8	□□□□□ -1.48
ROX3	YBL093C	YEL1	P34225	687 aa		5.79	□□□□□ -1.48
ROX3	YBL093C	PCH2	P38126	564 aa		5.79	□□□□□ -1.48
ROX3	YBL093C	EFM2	P38347	419 aa		5.79	□□□□□ -1.48
ROX3	YBL093C	TAT2	P38967	592 aa		5.79	□□□□□ -1.48
ROX3	YBL093C	CCC2	P38995	1004 aa		5.79	□□□□□ -1.48
ROX3	YBL093C	FYV8	P46949	817 aa	Known RBP	5.79	□□□□□ -1.48
ROX3	YBL093C	RIM8	P53179	542 aa		5.79	□□□□□ -1.48
ROX3	YBL093C	SLD5	Q03406	294 aa		5.79	□□□□□ -1.48
ROX3	YBL093C	PLB2	Q03674	706 aa		5.79	□□□□□ -1.48
ROX3	YBL093C	SIZ1	Q04195	904 aa		5.79	□□□□□ -1.48
ROX3	YBL093C	EAF1	Q06337	982 aa		5.79	□□□□□ -1.48
ROX3	YBL093C	YCG1	Q06680	1035 aa		5.79	□□□□□ -1.48
ROX3	YBL093C	HMI1	Q12039	706 aa		5.79	□□□□□ -1.48
ROX3	YBL093C	CWC2	Q12046	339 aa	Predicted RBP	5.79	□□□□□ -1.48
ROX3	YBL093C	ATG9	Q12142	997 aa		5.79	□□□□□ -1.48
ROX3	YBL093C	MED1	Q12321	566 aa		5.79	□□□□□ -1.48
ROX3	YBL093C	SOD2	P00447	233 aa		5.78	□□□□□ -1.48
ROX3	YBL093C	TCP1	P12612	559 aa	Known RBP	5.78	□□□□□ -1.48
ROX3	YBL093C	PRP6	P19735	899 aa	Predicted RBP	5.78	□□□□□ -1.48

Retrieved 100 of 5,963 RNA–protein pairs in 14.2 ms