Protein–RNA interactions for Protein: P47149

NNF1, Kinetochore-associated protein NNF1, yeastyeast

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NNF1P47149 YML009W-BYML009W-B 477 nt20.18■□□□□ 0.82
NNF1P47149 NSR1YGR159C 1245 nt20.14■□□□□ 0.81
NNF1P47149 NOP1YDL014W 984 nt19.75■□□□□ 0.75
NNF1P47149 YKL036CYKL036C 393 nt18.19■□□□□ 0.5
NNF1P47149 MDJ1YFL016C 1536 nt17.72■□□□□ 0.43
NNF1P47149 Q0297Q0297 156 nt17.26■□□□□ 0.35
NNF1P47149 SRX1YKL086W 384 nt17.21■□□□□ 0.35
NNF1P47149 YJL027CYJL027C 417 nt16.96■□□□□ 0.31
NNF1P47149 SCS3YGL126W 1143 nt16.48■□□□□ 0.23
NNF1P47149 YCR051WYCR051W 669 nt16.28■□□□□ 0.2
NNF1P47149 Q0182Q0182 405 nt16.13■□□□□ 0.17
NNF1P47149 YOL085CYOL085C 342 nt15.72■□□□□ 0.11
NNF1P47149 DBP2YNL112W 1641 nt15.69■□□□□ 0.1
NNF1P47149 TRN1tP(UGG)A 72 nt15.51■□□□□ 0.07
NNF1P47149 SUF9tP(UGG)F 72 nt15.51■□□□□ 0.07
NNF1P47149 SUF8tP(UGG)H 72 nt15.51■□□□□ 0.07
NNF1P47149 tP(UGG)LtP(UGG)L 72 nt15.51■□□□□ 0.07
NNF1P47149 SUF7tP(UGG)M 72 nt15.51■□□□□ 0.07
NNF1P47149 tP(UGG)N1tP(UGG)N1 72 nt15.51■□□□□ 0.07
NNF1P47149 tP(UGG)N2tP(UGG)N2 72 nt15.51■□□□□ 0.07
NNF1P47149 tP(UGG)O1tP(UGG)O1 72 nt15.51■□□□□ 0.07
NNF1P47149 SUF11tP(UGG)O2 72 nt15.51■□□□□ 0.07
NNF1P47149 MOT3YMR070W 1473 nt15.5■□□□□ 0.07
NNF1P47149 RPP1BYDL130W 321 nt15.47■□□□□ 0.07
NNF1P47149 PKP1YIL042C 1185 nt15.4■□□□□ 0.06
NNF1P47149 CCC1YLR220W 969 nt15.31■□□□□ 0.04
NNF1P47149 YBR190WYBR190W 312 nt15.23■□□□□ 0.03
NNF1P47149 RVS167YDR388W 1449 nt14.89□□□□□ -0.03
NNF1P47149 RTC3YHR087W 336 nt14.85□□□□□ -0.03
NNF1P47149 ATS1YAL020C 1002 nt14.79□□□□□ -0.04
NNF1P47149 SCJ1YMR214W 1134 nt14.76□□□□□ -0.05
NNF1P47149 PET122YER153C 765 nt14.7□□□□□ -0.06
NNF1P47149 tP(UGG)O3tP(UGG)O3 72 nt14.69□□□□□ -0.06
NNF1P47149 SCR1SCR1 522 nt14.67□□□□□ -0.06
NNF1P47149 SHR5YOL110W 714 nt14.34□□□□□ -0.11
NNF1P47149 RRN5YLR141W 1092 nt14.32□□□□□ -0.12
NNF1P47149 YDJ1YNL064C 1230 nt14.27□□□□□ -0.13
NNF1P47149 YER088W-BYER088W-B 147 nt14.03□□□□□ -0.16
NNF1P47149 RSB1YOR049C 1065 nt14.02□□□□□ -0.17
NNF1P47149 URN1YPR152C 1398 nt13.88□□□□□ -0.19
NNF1P47149 GAR1YHR089C 618 nt13.86□□□□□ -0.19
NNF1P47149 DEP1YAL013W 1218 nt13.82□□□□□ -0.2
NNF1P47149 RPN10YHR200W 807 nt13.79□□□□□ -0.2
NNF1P47149 YNL208WYNL208W 600 nt13.73□□□□□ -0.21
NNF1P47149 PUT4YOR348C 1884 nt13.72□□□□□ -0.21
NNF1P47149 OPI9YLR338W 858 nt13.72□□□□□ -0.21
NNF1P47149 PST2YDR032C 597 nt13.69□□□□□ -0.22
NNF1P47149 SAH1YER043C 1350 nt13.56□□□□□ -0.24
NNF1P47149 ARE1YCR048W 1833 nt13.47□□□□□ -0.25
NNF1P47149 TIR1YER011W 765 nt13.43□□□□□ -0.26
NNF1P47149 PUN1YLR414C 792 nt13.36□□□□□ -0.27
NNF1P47149 YHR049C-AYHR049C-A 297 nt13.3□□□□□ -0.28
NNF1P47149 POA1YBR022W 534 nt13.3□□□□□ -0.28
NNF1P47149 YJR018WYJR018W 363 nt13.28□□□□□ -0.28
NNF1P47149 SSA1YAL005C 1929 nt13.2□□□□□ -0.3
NNF1P47149 YKL097CYKL097C 411 nt13.17□□□□□ -0.3
NNF1P47149 PTC2YER089C 1395 nt13.12□□□□□ -0.31
NNF1P47149 SSA3YBL075C 1950 nt13.11□□□□□ -0.31
NNF1P47149 SHU1YHL006C 453 nt13.08□□□□□ -0.32
NNF1P47149 RPP2BYDR382W 333 nt13.07□□□□□ -0.32
NNF1P47149 BUD23YCR047C 828 nt13.01□□□□□ -0.33
NNF1P47149 BSC6YOL137W 1494 nt13□□□□□ -0.33
NNF1P47149 NAB2YGL122C 1578 nt12.99□□□□□ -0.33
NNF1P47149 YJR120WYJR120W 351 nt12.98□□□□□ -0.33
NNF1P47149 SRB2YHR041C 633 nt12.89□□□□□ -0.35
NNF1P47149 INM2YDR287W 879 nt12.87□□□□□ -0.35
NNF1P47149 YGR021WYGR021W 873 nt12.83□□□□□ -0.36
NNF1P47149 YAL037C-BYAL037C-B 975 nt12.83□□□□□ -0.36
NNF1P47149 DAL1YIR027C 1383 nt12.81□□□□□ -0.36
NNF1P47149 WWM1YFL010C 636 nt12.79□□□□□ -0.36
NNF1P47149 BDH2YAL061W 1254 nt12.78□□□□□ -0.36
NNF1P47149 FIS1YIL065C 468 nt12.73□□□□□ -0.37
NNF1P47149 FPR4YLR449W 1179 nt12.73□□□□□ -0.37
NNF1P47149 HOM6YJR139C 1080 nt12.71□□□□□ -0.37
NNF1P47149 YFL021C-AYFL021C-A 855 nt12.67□□□□□ -0.38
NNF1P47149 LSM3YLR438C-A 270 nt12.67□□□□□ -0.38
NNF1P47149 YBL100CYBL100C 315 nt12.67□□□□□ -0.38
NNF1P47149 PHO4YFR034C 939 nt12.65□□□□□ -0.38
NNF1P47149 MNP1YGL068W 585 nt12.57□□□□□ -0.4
NNF1P47149 YOR139CYOR139C 393 nt12.57□□□□□ -0.4
NNF1P47149 TRM9YML014W 840 nt12.56□□□□□ -0.4
NNF1P47149 NPL3YDR432W 1245 nt12.54□□□□□ -0.4
NNF1P47149 RKM5YLR137W 1104 nt12.53□□□□□ -0.4
NNF1P47149 FUN26YAL022C 1554 nt12.52□□□□□ -0.4
NNF1P47149 YOL037CYOL037C 354 nt12.51□□□□□ -0.41
NNF1P47149 YPS1YLR120C 1710 nt12.41□□□□□ -0.42
NNF1P47149 CCT6YDR188W 1641 nt12.4□□□□□ -0.42
NNF1P47149 ALF1YNL148C 765 nt12.38□□□□□ -0.43
NNF1P47149 YDR095CYDR095C 411 nt12.35□□□□□ -0.43
NNF1P47149 SUF2tP(AGG)C 72 nt12.35□□□□□ -0.43
NNF1P47149 SUF10tP(AGG)N 72 nt12.35□□□□□ -0.43
NNF1P47149 SPT5YML010W 3192 nt12.32□□□□□ -0.44
NNF1P47149 YHR165W-AYHR165W-A 312 nt12.28□□□□□ -0.44
NNF1P47149 MEP2YNL142W 1500 nt12.22□□□□□ -0.45
NNF1P47149 YLR281CYLR281C 468 nt12.18□□□□□ -0.46
NNF1P47149 SIS1YNL007C 1059 nt12.18□□□□□ -0.46
NNF1P47149 RPP2AYOL039W 321 nt12.14□□□□□ -0.47
NNF1P47149 tM(CAU)CtM(CAU)C 72 nt12.12□□□□□ -0.47
NNF1P47149 IMT4tM(CAU)E 72 nt12.12□□□□□ -0.47
NNF1P47149 IMT3tM(CAU)J3 72 nt12.12□□□□□ -0.47
Retrieved 100 of 7,029 protein–RNA pairs in 11.4 ms