RNA–Protein interactions for RNA: YBL093C

ROX3, Transcript of Subunit of the RNA polymerase II mediator complex, yeastyeast

Gene ROX3, Length 663 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ROX3YBL093C MTC1P47018 478 aaKnown RBP14.8□□□□□ -0.04
ROX3YBL093C DRS1P32892 752 aaKnown RBP14.57□□□□□ -0.08
ROX3YBL093C FAP1P53971 965 aa12.58□□□□□ -0.4
ROX3YBL093C DIP2Q12220 943 aaPredicted RBP12.51□□□□□ -0.41
ROX3YBL093C BFR2Q06631 534 aaKnown RBP12.45□□□□□ -0.42
ROX3YBL093C AVT3P36062 692 aa12.22□□□□□ -0.45
ROX3YBL093C ISW2Q08773 1120 aa12.16□□□□□ -0.46
ROX3YBL093C PRI1P10363 409 aa12.07□□□□□ -0.48
ROX3YBL093C RPG1P38249 964 aaKnown RBP11.99□□□□□ -0.49
ROX3YBL093C AAD16Q02895 342 aa11.94□□□□□ -0.5
ROX3YBL093C RSE1Q04693 1361 aaKnown RBP11.91□□□□□ -0.5
ROX3YBL093C PRY3P47033 881 aa11.75□□□□□ -0.53
ROX3YBL093C RPL17AP05740 184 aaKnown RBP11.48□□□□□ -0.57
ROX3YBL093C RPL17BP46990 184 aaKnown RBP11.48□□□□□ -0.57
ROX3YBL093C TFA1P36100 482 aa11.47□□□□□ -0.57
ROX3YBL093C TSR3Q12094 313 aaKnown RBP11.47□□□□□ -0.57
ROX3YBL093C REB1P21538 810 aa11.39□□□□□ -0.59
ROX3YBL093C HAA1Q12753 694 aaKnown RBP11.09□□□□□ -0.63
ROX3YBL093C MRPL32P25348 183 aa11.05□□□□□ -0.64
ROX3YBL093C YCK3P39962 524 aa11.02□□□□□ -0.65
ROX3YBL093C SPT21P35209 758 aa10.96□□□□□ -0.65
ROX3YBL093C RIM101P33400 625 aa10.79□□□□□ -0.68
ROX3YBL093C YKR023WP36119 530 aaKnown RBP10.71□□□□□ -0.69
ROX3YBL093C CDC27P38042 758 aa10.55□□□□□ -0.72
ROX3YBL093C HOP09932 586 aa10.51□□□□□ -0.73
ROX3YBL093C TFC8Q12308 588 aa10.5□□□□□ -0.73
ROX3YBL093C OXP1P28273 1286 aa10.44□□□□□ -0.74
ROX3YBL093C DCD1P06773 312 aa10.43□□□□□ -0.74
ROX3YBL093C YGL015CP33199 130 aa10.41□□□□□ -0.74
ROX3YBL093C YIL055CP40523 627 aaKnown RBP10.37□□□□□ -0.75
ROX3YBL093C PTP3P40048 928 aa10.29□□□□□ -0.76
ROX3YBL093C YAH1Q12184 172 aaKnown RBP10.27□□□□□ -0.77
ROX3YBL093C BCH2P36122 765 aa10.19□□□□□ -0.78
ROX3YBL093C SSP1P38871 571 aa10.19□□□□□ -0.78
ROX3YBL093C UBP10P53874 792 aaPredicted RBP10.19□□□□□ -0.78
ROX3YBL093C RSM7P47150 247 aa10.17□□□□□ -0.78
ROX3YBL093C MAP2P38174 421 aaKnown RBP10.16□□□□□ -0.78
ROX3YBL093C SCY1P53009 804 aa10.1□□□□□ -0.79
ROX3YBL093C YLR271WQ06152 274 aa10.09□□□□□ -0.79
ROX3YBL093C ARP8Q12386 881 aaKnown RBP RIP-Chip data10.08□□□□□ -0.8not detected
ROX3YBL093C AI2P03876 854 aa10□□□□□ -0.81
ROX3YBL093C BBC1P47068 1157 aa10□□□□□ -0.81
ROX3YBL093C EPS1P40557 701 aa9.99□□□□□ -0.81
ROX3YBL093C SLX5P32828 619 aaKnown RBP9.95□□□□□ -0.82
ROX3YBL093C BDF1P35817 686 aa9.94□□□□□ -0.82
ROX3YBL093C MGA2P40578 1113 aa9.86□□□□□ -0.83
ROX3YBL093C PSD2P53037 1138 aaKnown RBP9.84□□□□□ -0.83
ROX3YBL093C TIF4632P39936 914 aaKnown RBP9.82□□□□□ -0.84
ROX3YBL093C SGS1P35187 1447 aa9.77□□□□□ -0.85
ROX3YBL093C CST9Q06032 482 aa9.76□□□□□ -0.85
ROX3YBL093C TGL3P40308 642 aa9.74□□□□□ -0.85
ROX3YBL093C MRM1P25270 412 aa9.68□□□□□ -0.86
ROX3YBL093C INO80P53115 1489 aa9.63□□□□□ -0.87
ROX3YBL093C MON2P48563 1636 aaPredicted RBP9.56□□□□□ -0.88
ROX3YBL093C TCB3Q03640 1545 aaKnown RBP9.56□□□□□ -0.88
ROX3YBL093C RTG3P38165 486 aa9.55□□□□□ -0.88
ROX3YBL093C TY1B-DR4Q07793 1604 aa9.53□□□□□ -0.88
ROX3YBL093C NSR1P27476 414 aaKnown RBP RIP-Chip data9.47□□□□□ -0.89not detected
ROX3YBL093C YAP5P40574 245 aa9.47□□□□□ -0.89
ROX3YBL093C RQC2Q12532 1038 aaKnown RBP9.46□□□□□ -0.9
ROX3YBL093C RCR1P38212 213 aa9.45□□□□□ -0.9
ROX3YBL093C YOR238WQ08634 303 aa9.45□□□□□ -0.9
ROX3YBL093C VPS29P38759 282 aa9.43□□□□□ -0.9
ROX3YBL093C YMR1P47147 688 aaKnown RBP RIP-Chip data9.4□□□□□ -0.9not detected
ROX3YBL093C MST1P07236 462 aa9.38□□□□□ -0.91
ROX3YBL093C RAM2P29703 316 aa9.37□□□□□ -0.91
ROX3YBL093C DBP1P24784 617 aaKnown RBP9.35□□□□□ -0.91
ROX3YBL093C DMA1P38823 416 aa9.34□□□□□ -0.91
ROX3YBL093C PIB1Q06651 286 aa9.33□□□□□ -0.92
ROX3YBL093C YFR006WP43590 535 aa9.32□□□□□ -0.92
ROX3YBL093C SWR1Q05471 1514 aa9.31□□□□□ -0.92
ROX3YBL093C SPA2P23201 1466 aaKnown RBP9.29□□□□□ -0.92
ROX3YBL093C STS1P38637 319 aa9.29□□□□□ -0.92
ROX3YBL093C SSN2P38931 1420 aa9.28□□□□□ -0.92
ROX3YBL093C MAK11P20484 414 aaKnown RBP9.27□□□□□ -0.93
ROX3YBL093C HSL1P34244 1518 aa9.26□□□□□ -0.93
ROX3YBL093C UBP9P39967 754 aa9.26□□□□□ -0.93
ROX3YBL093C GTT3P39996 337 aa9.26□□□□□ -0.93
ROX3YBL093C SPT6P23615 1451 aaKnown RBP9.21□□□□□ -0.93
ROX3YBL093C MIF2P35201 549 aa9.18□□□□□ -0.94
ROX3YBL093C VMA1P17255 1071 aaKnown RBP9.17□□□□□ -0.94
ROX3YBL093C BUD31P25337 157 aaPredicted RBP9.16□□□□□ -0.94
ROX3YBL093C COQ8P27697 501 aa9.15□□□□□ -0.94
ROX3YBL093C WSC3Q12215 556 aa9.14□□□□□ -0.95
ROX3YBL093C SET1P38827 1080 aaKnown RBP9.13□□□□□ -0.95
ROX3YBL093C YBL029C-AQ3E756 94 aa9.12□□□□□ -0.95
ROX3YBL093C HIR3P47171 1648 aa9.1□□□□□ -0.95
ROX3YBL093C VNX1P42839 908 aa9.08□□□□□ -0.96
ROX3YBL093C SAM3Q08986 587 aa9.08□□□□□ -0.96
ROX3YBL093C EDS1P38073 919 aa9.07□□□□□ -0.96
ROX3YBL093C DNA2P38859 1522 aa9.06□□□□□ -0.96
ROX3YBL093C NOP53Q12080 455 aaKnown RBP9.06□□□□□ -0.96
ROX3YBL093C PTC3P34221 468 aaKnown RBP9.05□□□□□ -0.96
ROX3YBL093C SET4P42948 560 aa9.04□□□□□ -0.96
ROX3YBL093C YOL036WQ08206 761 aa9.04□□□□□ -0.96
ROX3YBL093C SPP1Q03012 353 aa9.03□□□□□ -0.96
ROX3YBL093C MSB4Q12317 492 aa9.03□□□□□ -0.96
ROX3YBL093C GYP5Q12344 894 aa9.03□□□□□ -0.96
ROX3YBL093C KOG1P38873 1557 aa9.01□□□□□ -0.97
ROX3YBL093C GRE2Q12068 342 aaKnown RBP9□□□□□ -0.97
Retrieved 100 of 5,963 RNA–protein pairs in 14.4 ms