Protein–RNA interactions for Protein: Q04195

SIZ1, E3 SUMO-protein ligase SIZ1, yeastyeast

Predictions only

Length 904 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SIZ1Q04195 YML009W-BYML009W-B 477 nt19.44■□□□□ 0.7
SIZ1Q04195 NSR1YGR159C 1245 nt19.2■□□□□ 0.66
SIZ1Q04195 NOP1YDL014W 984 nt19.17■□□□□ 0.66
SIZ1Q04195 YKL036CYKL036C 393 nt17.91■□□□□ 0.46
SIZ1Q04195 Q0297Q0297 156 nt16.84■□□□□ 0.29
SIZ1Q04195 YJL027CYJL027C 417 nt16.73■□□□□ 0.27
SIZ1Q04195 SRX1YKL086W 384 nt16.71■□□□□ 0.27
SIZ1Q04195 MDJ1YFL016C 1536 nt16.58■□□□□ 0.24
SIZ1Q04195 SCS3YGL126W 1143 nt16.36■□□□□ 0.21
SIZ1Q04195 YCR051WYCR051W 669 nt15.8■□□□□ 0.12
SIZ1Q04195 YOL085CYOL085C 342 nt15.46■□□□□ 0.07
SIZ1Q04195 RPP1BYDL130W 321 nt15.09■□□□□ 0.01
SIZ1Q04195 PKP1YIL042C 1185 nt15.08■□□□□ 0
SIZ1Q04195 SCJ1YMR214W 1134 nt15.04■□□□□ -0
SIZ1Q04195 TRN1tP(UGG)A 72 nt14.89□□□□□ -0.03
SIZ1Q04195 SUF9tP(UGG)F 72 nt14.89□□□□□ -0.03
SIZ1Q04195 SUF8tP(UGG)H 72 nt14.89□□□□□ -0.03
SIZ1Q04195 tP(UGG)LtP(UGG)L 72 nt14.89□□□□□ -0.03
SIZ1Q04195 SUF7tP(UGG)M 72 nt14.89□□□□□ -0.03
SIZ1Q04195 tP(UGG)N1tP(UGG)N1 72 nt14.89□□□□□ -0.03
SIZ1Q04195 tP(UGG)N2tP(UGG)N2 72 nt14.89□□□□□ -0.03
SIZ1Q04195 tP(UGG)O1tP(UGG)O1 72 nt14.89□□□□□ -0.03
SIZ1Q04195 SUF11tP(UGG)O2 72 nt14.89□□□□□ -0.03
SIZ1Q04195 DBP2YNL112W 1641 nt14.81□□□□□ -0.04
SIZ1Q04195 ATS1YAL020C 1002 nt14.76□□□□□ -0.05
SIZ1Q04195 CCC1YLR220W 969 nt14.67□□□□□ -0.06
SIZ1Q04195 SCR1SCR1 522 nt14.36□□□□□ -0.11
SIZ1Q04195 PET122YER153C 765 nt14.3□□□□□ -0.12
SIZ1Q04195 YBR190WYBR190W 312 nt14.21□□□□□ -0.13
SIZ1Q04195 tP(UGG)O3tP(UGG)O3 72 nt14.18□□□□□ -0.14
SIZ1Q04195 RVS167YDR388W 1449 nt14.15□□□□□ -0.14
SIZ1Q04195 SSA3YBL075C 1950 nt14□□□□□ -0.17
SIZ1Q04195 RRN5YLR141W 1092 nt13.95□□□□□ -0.18
SIZ1Q04195 RTC3YHR087W 336 nt13.84□□□□□ -0.19
SIZ1Q04195 YDJ1YNL064C 1230 nt13.79□□□□□ -0.2
SIZ1Q04195 RSB1YOR049C 1065 nt13.75□□□□□ -0.21
SIZ1Q04195 SHR5YOL110W 714 nt13.68□□□□□ -0.22
SIZ1Q04195 YER088W-BYER088W-B 147 nt13.67□□□□□ -0.22
SIZ1Q04195 PST2YDR032C 597 nt13.62□□□□□ -0.23
SIZ1Q04195 GAR1YHR089C 618 nt13.33□□□□□ -0.28
SIZ1Q04195 YKL097CYKL097C 411 nt13.25□□□□□ -0.29
SIZ1Q04195 RPN10YHR200W 807 nt13.06□□□□□ -0.32
SIZ1Q04195 DEP1YAL013W 1218 nt13.06□□□□□ -0.32
SIZ1Q04195 URN1YPR152C 1398 nt13.06□□□□□ -0.32
SIZ1Q04195 YNL208WYNL208W 600 nt13.03□□□□□ -0.32
SIZ1Q04195 SHU1YHL006C 453 nt12.94□□□□□ -0.34
SIZ1Q04195 TIR1YER011W 765 nt12.9□□□□□ -0.34
SIZ1Q04195 OPI9YLR338W 858 nt12.86□□□□□ -0.35
SIZ1Q04195 PUT4YOR348C 1884 nt12.8□□□□□ -0.36
SIZ1Q04195 SSA1YAL005C 1929 nt12.62□□□□□ -0.39
SIZ1Q04195 SAH1YER043C 1350 nt12.61□□□□□ -0.39
SIZ1Q04195 YOR139CYOR139C 393 nt12.59□□□□□ -0.39
SIZ1Q04195 YAL037C-BYAL037C-B 975 nt12.57□□□□□ -0.4
SIZ1Q04195 PUN1YLR414C 792 nt12.54□□□□□ -0.4
SIZ1Q04195 YJR018WYJR018W 363 nt12.51□□□□□ -0.41
SIZ1Q04195 NPL3YDR432W 1245 nt12.5□□□□□ -0.41
SIZ1Q04195 YGR021WYGR021W 873 nt12.49□□□□□ -0.41
SIZ1Q04195 ARE1YCR048W 1833 nt12.43□□□□□ -0.42
SIZ1Q04195 RPP2BYDR382W 333 nt12.41□□□□□ -0.42
SIZ1Q04195 Q0182Q0182 405 nt12.39□□□□□ -0.43
SIZ1Q04195 HOM6YJR139C 1080 nt12.37□□□□□ -0.43
SIZ1Q04195 SRB2YHR041C 633 nt12.35□□□□□ -0.43
SIZ1Q04195 YOL037CYOL037C 354 nt12.34□□□□□ -0.43
SIZ1Q04195 POA1YBR022W 534 nt12.34□□□□□ -0.43
SIZ1Q04195 WWM1YFL010C 636 nt12.33□□□□□ -0.44
SIZ1Q04195 SPT5YML010W 3192 nt12.28□□□□□ -0.44
SIZ1Q04195 YHR049C-AYHR049C-A 297 nt12.27□□□□□ -0.45
SIZ1Q04195 YJR120WYJR120W 351 nt12.27□□□□□ -0.45
SIZ1Q04195 SSA4YER103W 1929 nt12.26□□□□□ -0.45
SIZ1Q04195 MNP1YGL068W 585 nt12.25□□□□□ -0.45
SIZ1Q04195 PTC2YER089C 1395 nt12.24□□□□□ -0.45
SIZ1Q04195 BSC6YOL137W 1494 nt12.23□□□□□ -0.45
SIZ1Q04195 YFL021C-AYFL021C-A 855 nt12.23□□□□□ -0.45
SIZ1Q04195 RKM5YLR137W 1104 nt12.19□□□□□ -0.46
SIZ1Q04195 BDH2YAL061W 1254 nt12.17□□□□□ -0.46
SIZ1Q04195 MOT3YMR070W 1473 nt12.14□□□□□ -0.47
SIZ1Q04195 LSM3YLR438C-A 270 nt12.13□□□□□ -0.47
SIZ1Q04195 tM(CAU)CtM(CAU)C 72 nt12.12□□□□□ -0.47
SIZ1Q04195 IMT4tM(CAU)E 72 nt12.12□□□□□ -0.47
SIZ1Q04195 IMT3tM(CAU)J3 72 nt12.12□□□□□ -0.47
SIZ1Q04195 IMT1tM(CAU)O1 72 nt12.12□□□□□ -0.47
SIZ1Q04195 IMT2tM(CAU)P 72 nt12.12□□□□□ -0.47
SIZ1Q04195 INM2YDR287W 879 nt12.1□□□□□ -0.47
SIZ1Q04195 NAB2YGL122C 1578 nt12.09□□□□□ -0.47
SIZ1Q04195 BUD23YCR047C 828 nt12.01□□□□□ -0.49
SIZ1Q04195 DAL1YIR027C 1383 nt11.98□□□□□ -0.49
SIZ1Q04195 YLR281CYLR281C 468 nt11.98□□□□□ -0.49
SIZ1Q04195 YBL100CYBL100C 315 nt11.95□□□□□ -0.5
SIZ1Q04195 PUS2YGL063W 1113 nt11.92□□□□□ -0.5
SIZ1Q04195 TRM9YML014W 840 nt11.92□□□□□ -0.5
SIZ1Q04195 FPR4YLR449W 1179 nt11.88□□□□□ -0.51
SIZ1Q04195 WHI5YOR083W 888 nt11.88□□□□□ -0.51
SIZ1Q04195 BDF1YLR399C 2061 nt11.88□□□□□ -0.51
SIZ1Q04195 FIS1YIL065C 468 nt11.87□□□□□ -0.51
SIZ1Q04195 PHO4YFR034C 939 nt11.82□□□□□ -0.52
SIZ1Q04195 FUN26YAL022C 1554 nt11.82□□□□□ -0.52
SIZ1Q04195 IMP2'YIL154C 1041 nt11.77□□□□□ -0.53
SIZ1Q04195 CCT6YDR188W 1641 nt11.76□□□□□ -0.53
SIZ1Q04195 SUF2tP(AGG)C 72 nt11.7□□□□□ -0.54
SIZ1Q04195 SUF10tP(AGG)N 72 nt11.7□□□□□ -0.54
Retrieved 100 of 7,029 protein–RNA pairs in 8.4 ms