RNA–Protein interactions for RNA: YLR220W

CCC1, Transcript of Vacuolar Fe2+/Mn2+ transporter, yeast

Gene CCC1, Length 969 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CCC1	YLR220W	GFA1	P14742	717 aa	Known RBP	16.35	■□□□□ 0.21
CCC1	YLR220W	ABD1	P32783	436 aa	Predicted RBP	16.35	■□□□□ 0.21
CCC1	YLR220W	RGD1	P38339	666 aa		16.35	■□□□□ 0.21
CCC1	YLR220W	RCK2	P38623	610 aa		16.35	■□□□□ 0.21
CCC1	YLR220W	HIS2	P38635	335 aa		16.35	■□□□□ 0.21
CCC1	YLR220W	PMC1	P38929	1173 aa	Predicted RBP	16.35	■□□□□ 0.21
CCC1	YLR220W	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	16.35	■□□□□ 0.21	not detected
CCC1	YLR220W	MDM38	Q08179	573 aa		16.35	■□□□□ 0.21
CCC1	YLR220W	MNL2	Q12205	849 aa		16.35	■□□□□ 0.21
CCC1	YLR220W	MCM16	Q12262	181 aa		16.35	■□□□□ 0.21
CCC1	YLR220W	AEP2	P22136	580 aa		16.34	■□□□□ 0.21
CCC1	YLR220W	PGS1	P25578	521 aa		16.34	■□□□□ 0.21
CCC1	YLR220W	YIR016W	P40572	265 aa		16.34	■□□□□ 0.21
CCC1	YLR220W	PFD1	P46988	109 aa		16.34	■□□□□ 0.21
CCC1	YLR220W	VPS25	P47142	202 aa		16.34	■□□□□ 0.21
CCC1	YLR220W	TAF9	Q05027	157 aa		16.34	■□□□□ 0.21
CCC1	YLR220W	HRT3	Q12347	344 aa		16.34	■□□□□ 0.21
CCC1	YLR220W	SIF2	P38262	535 aa		16.33	■□□□□ 0.2
CCC1	YLR220W	RRT2	P38332	387 aa		16.33	■□□□□ 0.2
CCC1	YLR220W	SAF1	P38352	637 aa		16.33	■□□□□ 0.2
CCC1	YLR220W	APM2	P38700	605 aa		16.33	■□□□□ 0.2
CCC1	YLR220W	FHL1	P39521	936 aa		16.33	■□□□□ 0.2
CCC1	YLR220W	TMN3	P40071	706 aa		16.33	■□□□□ 0.2
CCC1	YLR220W	RPT2	P40327	437 aa	Known RBP	16.33	■□□□□ 0.2
CCC1	YLR220W	PRM6	Q04705	352 aa		16.33	■□□□□ 0.2
CCC1	YLR220W	RCL1	Q08096	367 aa	Predicted RBP	16.33	■□□□□ 0.2
CCC1	YLR220W	AIM39	Q08223	395 aa		16.33	■□□□□ 0.2
CCC1	YLR220W	YOR059C	Q08448	450 aa	Known RBP	16.33	■□□□□ 0.2
CCC1	YLR220W	CIR2	Q08822	631 aa		16.33	■□□□□ 0.2
CCC1	YLR220W	EMP46	Q12396	444 aa		16.33	■□□□□ 0.2
CCC1	YLR220W	SYN8	P31377	255 aa		16.32	■□□□□ 0.2
CCC1	YLR220W	DBF4	P32325	704 aa		16.32	■□□□□ 0.2
CCC1	YLR220W	POB3	Q04636	552 aa	Known RBP	16.32	■□□□□ 0.2
CCC1	YLR220W	NBP2	Q12163	236 aa		16.32	■□□□□ 0.2
CCC1	YLR220W	MAS1	P10507	462 aa		16.31	■□□□□ 0.2
CCC1	YLR220W	PCM1	P38628	557 aa	Known RBP	16.31	■□□□□ 0.2
CCC1	YLR220W	NDC80	P40460	691 aa		16.31	■□□□□ 0.2
CCC1	YLR220W	MAF1	P41910	395 aa		16.31	■□□□□ 0.2
CCC1	YLR220W	YVH1	Q02256	364 aa	Known RBP	16.31	■□□□□ 0.2
CCC1	YLR220W	GYL1	Q04322	720 aa		16.31	■□□□□ 0.2
CCC1	YLR220W	YDR278C	Q05612	105 aa		16.31	■□□□□ 0.2
CCC1	YLR220W	YLR462W	O13556	202 aa		16.3	■□□□□ 0.2
CCC1	YLR220W	PDR1	P12383	1068 aa		16.3	■□□□□ 0.2
CCC1	YLR220W	KAR3	P17119	729 aa		16.3	■□□□□ 0.2
CCC1	YLR220W	STE11	P23561	717 aa		16.3	■□□□□ 0.2
CCC1	YLR220W	TSA1	P34760	196 aa	Known RBP	16.3	■□□□□ 0.2
CCC1	YLR220W	YHL049C	P38722	271 aa		16.3	■□□□□ 0.2
CCC1	YLR220W	LCP5	P40079	357 aa	Predicted RBP	16.3	■□□□□ 0.2
CCC1	YLR220W	YER189W	P40104	122 aa		16.3	■□□□□ 0.2
CCC1	YLR220W	YFL064C	P43540	174 aa		16.3	■□□□□ 0.2
CCC1	YLR220W	BRO1	P48582	844 aa		16.3	■□□□□ 0.2
CCC1	YLR220W	CEG1	Q01159	459 aa	Predicted RBP	16.3	■□□□□ 0.2
CCC1	YLR220W	YBL111C	Q3E7Y5	667 aa		16.3	■□□□□ 0.2
CCC1	YLR220W	PET111	P08468	800 aa		16.29	■□□□□ 0.2
CCC1	YLR220W	TRX1	P22217	103 aa	Known RBP	16.29	■□□□□ 0.2
CCC1	YLR220W	SEC1	P30619	724 aa	Known RBP	16.29	■□□□□ 0.2
CCC1	YLR220W	SRB2	P34162	210 aa		16.29	■□□□□ 0.2
CCC1	YLR220W	YBR056W	P38081	501 aa		16.29	■□□□□ 0.2
CCC1	YLR220W	YMR114C	Q04471	368 aa	Known RBP	16.29	■□□□□ 0.2
CCC1	YLR220W	DDC1	Q08949	612 aa		16.29	■□□□□ 0.2
CCC1	YLR220W	YPR117W	Q06116	2489 aa		16.29	■□□□□ 0.2
CCC1	YLR220W	YBL055C	P34220	418 aa	Predicted RBP	16.28	■□□□□ 0.2
CCC1	YLR220W	YBR053C	P38235	358 aa		16.28	■□□□□ 0.2
CCC1	YLR220W	SWC5	P38326	303 aa		16.28	■□□□□ 0.2
CCC1	YLR220W	SMF1	P38925	575 aa		16.28	■□□□□ 0.2
CCC1	YLR220W	PRK1	P40494	810 aa		16.28	■□□□□ 0.2
CCC1	YLR220W	SPE3	Q12074	293 aa	Known RBP	16.28	■□□□□ 0.2
CCC1	YLR220W	YDR034W-B	Q6Q5X2	51 aa		16.28	■□□□□ 0.2
CCC1	YLR220W	VPS5	Q92331	675 aa		16.28	■□□□□ 0.2
CCC1	YLR220W	CAP1	P28495	268 aa	Known RBP	16.27	■□□□□ 0.2
CCC1	YLR220W	DSS4	P32601	143 aa		16.27	■□□□□ 0.2
CCC1	YLR220W	SEG2	P34250	1132 aa		16.27	■□□□□ 0.2
CCC1	YLR220W	CDC1	P40986	491 aa		16.27	■□□□□ 0.2
CCC1	YLR220W	GUF1	P46943	645 aa		16.27	■□□□□ 0.2
CCC1	YLR220W	YJL045W	P47052	634 aa		16.27	■□□□□ 0.2
CCC1	YLR220W	YNL108C	P53929	270 aa		16.27	■□□□□ 0.2
CCC1	YLR220W	IVY1	Q04934	453 aa		16.27	■□□□□ 0.2
CCC1	YLR220W	LYS9	P38999	446 aa		16.26	■□□□□ 0.19
CCC1	YLR220W	HRD3	Q05787	833 aa		16.26	■□□□□ 0.19
CCC1	YLR220W	SPO21	Q12411	609 aa		16.26	■□□□□ 0.19
CCC1	YLR220W	SPE1	P08432	466 aa		16.25	■□□□□ 0.19
CCC1	YLR220W	YPK1	P12688	680 aa	Known RBP	16.25	■□□□□ 0.19
CCC1	YLR220W	RGR1	P19263	1082 aa		16.25	■□□□□ 0.19
CCC1	YLR220W	SFL1	P20134	766 aa		16.25	■□□□□ 0.19
CCC1	YLR220W	DPB3	P27344	201 aa		16.25	■□□□□ 0.19
CCC1	YLR220W	PAP1	P29468	568 aa	Known RBP	16.25	■□□□□ 0.19
CCC1	YLR220W	YEL043W	P32618	956 aa		16.25	■□□□□ 0.19
CCC1	YLR220W	YKR051W	P36142	418 aa		16.25	■□□□□ 0.19
CCC1	YLR220W	ERP2	P39704	215 aa		16.25	■□□□□ 0.19
CCC1	YLR220W	ECM22	Q05958	814 aa	Predicted RBP	16.25	■□□□□ 0.19
CCC1	YLR220W	YLR257W	Q06146	321 aa	Known RBP	16.25	■□□□□ 0.19
CCC1	YLR220W	YRR1	Q12172	810 aa		16.25	■□□□□ 0.19
CCC1	YLR220W	CDC27	P38042	758 aa		16.24	■□□□□ 0.19
CCC1	YLR220W	TMA108	P40462	946 aa		16.24	■□□□□ 0.19
CCC1	YLR220W	YIL054W	P40524	105 aa		16.24	■□□□□ 0.19
CCC1	YLR220W	CWC22	P53333	577 aa	Known RBP	16.24	■□□□□ 0.19
CCC1	YLR220W	MAL13	P53338	473 aa		16.24	■□□□□ 0.19
CCC1	YLR220W	CDC55	Q00362	526 aa		16.24	■□□□□ 0.19
CCC1	YLR220W	HER2	Q03557	464 aa		16.24	■□□□□ 0.19
CCC1	YLR220W	UFO1	Q04511	668 aa		16.23	■□□□□ 0.19

Retrieved 100 of 5,963 RNA–protein pairs in 52.5 ms