Protein–RNA interactions for Protein: P46988

PFD1, Prefoldin subunit 1, yeastyeast

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PFD1P46988 YML009W-BYML009W-B 477 nt21.51■■□□□ 1.03
PFD1P46988 NSR1YGR159C 1245 nt21.36■■□□□ 1.01
PFD1P46988 NOP1YDL014W 984 nt20.98■□□□□ 0.95
PFD1P46988 YKL036CYKL036C 393 nt19.44■□□□□ 0.7
PFD1P46988 MDJ1YFL016C 1536 nt18.84■□□□□ 0.61
PFD1P46988 Q0297Q0297 156 nt18.41■□□□□ 0.54
PFD1P46988 SRX1YKL086W 384 nt18.34■□□□□ 0.53
PFD1P46988 YJL027CYJL027C 417 nt18.14■□□□□ 0.49
PFD1P46988 SCS3YGL126W 1143 nt17.71■□□□□ 0.43
PFD1P46988 YCR051WYCR051W 669 nt17.38■□□□□ 0.37
PFD1P46988 YOL085CYOL085C 342 nt16.85■□□□□ 0.29
PFD1P46988 DBP2YNL112W 1641 nt16.74■□□□□ 0.27
PFD1P46988 PKP1YIL042C 1185 nt16.55■□□□□ 0.24
PFD1P46988 TRN1tP(UGG)A 72 nt16.52■□□□□ 0.24
PFD1P46988 SUF9tP(UGG)F 72 nt16.52■□□□□ 0.24
PFD1P46988 SUF8tP(UGG)H 72 nt16.52■□□□□ 0.24
PFD1P46988 tP(UGG)LtP(UGG)L 72 nt16.52■□□□□ 0.24
PFD1P46988 SUF7tP(UGG)M 72 nt16.52■□□□□ 0.24
PFD1P46988 tP(UGG)N1tP(UGG)N1 72 nt16.52■□□□□ 0.24
PFD1P46988 tP(UGG)N2tP(UGG)N2 72 nt16.52■□□□□ 0.24
PFD1P46988 tP(UGG)O1tP(UGG)O1 72 nt16.52■□□□□ 0.24
PFD1P46988 SUF11tP(UGG)O2 72 nt16.52■□□□□ 0.24
PFD1P46988 RPP1BYDL130W 321 nt16.51■□□□□ 0.23
PFD1P46988 CCC1YLR220W 969 nt16.34■□□□□ 0.21
PFD1P46988 YBR190WYBR190W 312 nt16.08■□□□□ 0.16
PFD1P46988 ATS1YAL020C 1002 nt15.89■□□□□ 0.13
PFD1P46988 SCJ1YMR214W 1134 nt15.83■□□□□ 0.12
PFD1P46988 PET122YER153C 765 nt15.75■□□□□ 0.11
PFD1P46988 RVS167YDR388W 1449 nt15.73■□□□□ 0.11
PFD1P46988 RTC3YHR087W 336 nt15.69■□□□□ 0.1
PFD1P46988 tP(UGG)O3tP(UGG)O3 72 nt15.67■□□□□ 0.1
PFD1P46988 SCR1SCR1 522 nt15.6■□□□□ 0.09
PFD1P46988 RRN5YLR141W 1092 nt15.33■□□□□ 0.04
PFD1P46988 SHR5YOL110W 714 nt15.22■□□□□ 0.03
PFD1P46988 YDJ1YNL064C 1230 nt15.17■□□□□ 0.02
PFD1P46988 YER088W-BYER088W-B 147 nt15.02■□□□□ -0
PFD1P46988 RSB1YOR049C 1065 nt15□□□□□ -0.01
PFD1P46988 GAR1YHR089C 618 nt14.79□□□□□ -0.04
PFD1P46988 DEP1YAL013W 1218 nt14.74□□□□□ -0.05
PFD1P46988 URN1YPR152C 1398 nt14.73□□□□□ -0.05
PFD1P46988 PST2YDR032C 597 nt14.72□□□□□ -0.05
PFD1P46988 YNL208WYNL208W 600 nt14.54□□□□□ -0.08
PFD1P46988 PUT4YOR348C 1884 nt14.53□□□□□ -0.08
PFD1P46988 RPN10YHR200W 807 nt14.53□□□□□ -0.08
PFD1P46988 OPI9YLR338W 858 nt14.52□□□□□ -0.09
PFD1P46988 SAH1YER043C 1350 nt14.39□□□□□ -0.11
PFD1P46988 TIR1YER011W 765 nt14.3□□□□□ -0.12
PFD1P46988 ARE1YCR048W 1833 nt14.29□□□□□ -0.12
PFD1P46988 Q0182Q0182 405 nt14.27□□□□□ -0.13
PFD1P46988 YKL097CYKL097C 411 nt14.14□□□□□ -0.15
PFD1P46988 SSA1YAL005C 1929 nt14.11□□□□□ -0.15
PFD1P46988 PUN1YLR414C 792 nt14.09□□□□□ -0.15
PFD1P46988 POA1YBR022W 534 nt14.09□□□□□ -0.15
PFD1P46988 SHU1YHL006C 453 nt14.08□□□□□ -0.16
PFD1P46988 YHR049C-AYHR049C-A 297 nt14.08□□□□□ -0.16
PFD1P46988 YJR018WYJR018W 363 nt14.07□□□□□ -0.16
PFD1P46988 MOT3YMR070W 1473 nt13.94□□□□□ -0.18
PFD1P46988 SRB2YHR041C 633 nt13.9□□□□□ -0.18
PFD1P46988 PTC2YER089C 1395 nt13.89□□□□□ -0.19
PFD1P46988 YJR120WYJR120W 351 nt13.88□□□□□ -0.19
PFD1P46988 YAL037C-BYAL037C-B 975 nt13.84□□□□□ -0.19
PFD1P46988 RPP2BYDR382W 333 nt13.8□□□□□ -0.2
PFD1P46988 BUD23YCR047C 828 nt13.76□□□□□ -0.21
PFD1P46988 BSC6YOL137W 1494 nt13.74□□□□□ -0.21
PFD1P46988 NAB2YGL122C 1578 nt13.71□□□□□ -0.21
PFD1P46988 WWM1YFL010C 636 nt13.68□□□□□ -0.22
PFD1P46988 YGR021WYGR021W 873 nt13.63□□□□□ -0.23
PFD1P46988 HOM6YJR139C 1080 nt13.59□□□□□ -0.23
PFD1P46988 INM2YDR287W 879 nt13.58□□□□□ -0.24
PFD1P46988 YOR139CYOR139C 393 nt13.58□□□□□ -0.24
PFD1P46988 BDH2YAL061W 1254 nt13.55□□□□□ -0.24
PFD1P46988 DAL1YIR027C 1383 nt13.54□□□□□ -0.24
PFD1P46988 SSA3YBL075C 1950 nt13.52□□□□□ -0.24
PFD1P46988 MNP1YGL068W 585 nt13.51□□□□□ -0.25
PFD1P46988 FIS1YIL065C 468 nt13.51□□□□□ -0.25
PFD1P46988 FPR4YLR449W 1179 nt13.49□□□□□ -0.25
PFD1P46988 YFL021C-AYFL021C-A 855 nt13.47□□□□□ -0.25
PFD1P46988 YBL100CYBL100C 315 nt13.43□□□□□ -0.26
PFD1P46988 NPL3YDR432W 1245 nt13.42□□□□□ -0.26
PFD1P46988 PHO4YFR034C 939 nt13.41□□□□□ -0.26
PFD1P46988 LSM3YLR438C-A 270 nt13.41□□□□□ -0.26
PFD1P46988 RKM5YLR137W 1104 nt13.39□□□□□ -0.27
PFD1P46988 YOL037CYOL037C 354 nt13.34□□□□□ -0.27
PFD1P46988 TRM9YML014W 840 nt13.29□□□□□ -0.28
PFD1P46988 FUN26YAL022C 1554 nt13.28□□□□□ -0.28
PFD1P46988 CCT6YDR188W 1641 nt13.15□□□□□ -0.3
PFD1P46988 YPS1YLR120C 1710 nt13.13□□□□□ -0.31
PFD1P46988 YDR095CYDR095C 411 nt13.06□□□□□ -0.32
PFD1P46988 tM(CAU)CtM(CAU)C 72 nt13.06□□□□□ -0.32
PFD1P46988 IMT4tM(CAU)E 72 nt13.06□□□□□ -0.32
PFD1P46988 IMT3tM(CAU)J3 72 nt13.06□□□□□ -0.32
PFD1P46988 IMT1tM(CAU)O1 72 nt13.06□□□□□ -0.32
PFD1P46988 IMT2tM(CAU)P 72 nt13.06□□□□□ -0.32
PFD1P46988 ALF1YNL148C 765 nt13.06□□□□□ -0.32
PFD1P46988 SPT5YML010W 3192 nt13.05□□□□□ -0.32
PFD1P46988 YLR281CYLR281C 468 nt13.04□□□□□ -0.32
PFD1P46988 SUF2tP(AGG)C 72 nt13.01□□□□□ -0.33
PFD1P46988 SUF10tP(AGG)N 72 nt13.01□□□□□ -0.33
PFD1P46988 WHI5YOR083W 888 nt12.99□□□□□ -0.33
PFD1P46988 YHR165W-AYHR165W-A 312 nt12.96□□□□□ -0.33
Retrieved 100 of 7,029 protein–RNA pairs in 12.7 ms