Protein–RNA interactions for Protein: P38999

LYS9, Saccharopine dehydrogenase [NADP(+), L-glutamate-forming], yeastyeast

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LYS9P38999 YML009W-BYML009W-B 477 nt21.36■■□□□ 1.01
LYS9P38999 NSR1YGR159C 1245 nt21.22■□□□□ 0.99
LYS9P38999 NOP1YDL014W 984 nt20.77■□□□□ 0.92
LYS9P38999 YKL036CYKL036C 393 nt19.13■□□□□ 0.65
LYS9P38999 MDJ1YFL016C 1536 nt18.85■□□□□ 0.61
LYS9P38999 Q0297Q0297 156 nt18.13■□□□□ 0.49
LYS9P38999 SRX1YKL086W 384 nt18.11■□□□□ 0.49
LYS9P38999 YJL027CYJL027C 417 nt17.88■□□□□ 0.45
LYS9P38999 SCS3YGL126W 1143 nt17.38■□□□□ 0.37
LYS9P38999 YCR051WYCR051W 669 nt17.22■□□□□ 0.35
LYS9P38999 DBP2YNL112W 1641 nt16.64■□□□□ 0.25
LYS9P38999 YOL085CYOL085C 342 nt16.56■□□□□ 0.24
LYS9P38999 TRN1tP(UGG)A 72 nt16.38■□□□□ 0.21
LYS9P38999 SUF9tP(UGG)F 72 nt16.38■□□□□ 0.21
LYS9P38999 SUF8tP(UGG)H 72 nt16.38■□□□□ 0.21
LYS9P38999 tP(UGG)LtP(UGG)L 72 nt16.38■□□□□ 0.21
LYS9P38999 SUF7tP(UGG)M 72 nt16.38■□□□□ 0.21
LYS9P38999 tP(UGG)N1tP(UGG)N1 72 nt16.38■□□□□ 0.21
LYS9P38999 tP(UGG)N2tP(UGG)N2 72 nt16.38■□□□□ 0.21
LYS9P38999 tP(UGG)O1tP(UGG)O1 72 nt16.38■□□□□ 0.21
LYS9P38999 SUF11tP(UGG)O2 72 nt16.38■□□□□ 0.21
LYS9P38999 PKP1YIL042C 1185 nt16.33■□□□□ 0.2
LYS9P38999 RPP1BYDL130W 321 nt16.29■□□□□ 0.2
LYS9P38999 CCC1YLR220W 969 nt16.26■□□□□ 0.19
LYS9P38999 YBR190WYBR190W 312 nt16.08■□□□□ 0.16
LYS9P38999 RTC3YHR087W 336 nt15.77■□□□□ 0.12
LYS9P38999 RVS167YDR388W 1449 nt15.72■□□□□ 0.11
LYS9P38999 SCJ1YMR214W 1134 nt15.57■□□□□ 0.08
LYS9P38999 PET122YER153C 765 nt15.56■□□□□ 0.08
LYS9P38999 ATS1YAL020C 1002 nt15.55■□□□□ 0.08
LYS9P38999 tP(UGG)O3tP(UGG)O3 72 nt15.51■□□□□ 0.07
LYS9P38999 SCR1SCR1 522 nt15.43■□□□□ 0.06
LYS9P38999 SHR5YOL110W 714 nt15.14■□□□□ 0.01
LYS9P38999 RRN5YLR141W 1092 nt15.12■□□□□ 0.01
LYS9P38999 YDJ1YNL064C 1230 nt14.98□□□□□ -0.01
LYS9P38999 RSB1YOR049C 1065 nt14.82□□□□□ -0.04
LYS9P38999 YER088W-BYER088W-B 147 nt14.81□□□□□ -0.04
LYS9P38999 URN1YPR152C 1398 nt14.73□□□□□ -0.05
LYS9P38999 DEP1YAL013W 1218 nt14.72□□□□□ -0.05
LYS9P38999 GAR1YHR089C 618 nt14.69□□□□□ -0.06
LYS9P38999 PUT4YOR348C 1884 nt14.59□□□□□ -0.07
LYS9P38999 RPN10YHR200W 807 nt14.53□□□□□ -0.08
LYS9P38999 YNL208WYNL208W 600 nt14.5□□□□□ -0.09
LYS9P38999 OPI9YLR338W 858 nt14.49□□□□□ -0.09
LYS9P38999 SAH1YER043C 1350 nt14.41□□□□□ -0.1
LYS9P38999 PST2YDR032C 597 nt14.38□□□□□ -0.11
LYS9P38999 ARE1YCR048W 1833 nt14.33□□□□□ -0.12
LYS9P38999 TIR1YER011W 765 nt14.18□□□□□ -0.14
LYS9P38999 YHR049C-AYHR049C-A 297 nt14.16□□□□□ -0.14
LYS9P38999 POA1YBR022W 534 nt14.16□□□□□ -0.14
LYS9P38999 PUN1YLR414C 792 nt14.09□□□□□ -0.15
LYS9P38999 YJR018WYJR018W 363 nt14.04□□□□□ -0.16
LYS9P38999 SSA1YAL005C 1929 nt14□□□□□ -0.17
LYS9P38999 PTC2YER089C 1395 nt13.93□□□□□ -0.18
LYS9P38999 BUD23YCR047C 828 nt13.86□□□□□ -0.19
LYS9P38999 YKL097CYKL097C 411 nt13.84□□□□□ -0.19
LYS9P38999 BSC6YOL137W 1494 nt13.84□□□□□ -0.19
LYS9P38999 SHU1YHL006C 453 nt13.81□□□□□ -0.2
LYS9P38999 RPP2BYDR382W 333 nt13.8□□□□□ -0.2
LYS9P38999 YJR120WYJR120W 351 nt13.76□□□□□ -0.21
LYS9P38999 NAB2YGL122C 1578 nt13.75□□□□□ -0.21
LYS9P38999 SSA3YBL075C 1950 nt13.72□□□□□ -0.21
LYS9P38999 SRB2YHR041C 633 nt13.72□□□□□ -0.21
LYS9P38999 YAL037C-BYAL037C-B 975 nt13.62□□□□□ -0.23
LYS9P38999 FPR4YLR449W 1179 nt13.58□□□□□ -0.24
LYS9P38999 DAL1YIR027C 1383 nt13.56□□□□□ -0.24
LYS9P38999 INM2YDR287W 879 nt13.55□□□□□ -0.24
LYS9P38999 WWM1YFL010C 636 nt13.55□□□□□ -0.24
LYS9P38999 FIS1YIL065C 468 nt13.52□□□□□ -0.25
LYS9P38999 YGR021WYGR021W 873 nt13.49□□□□□ -0.25
LYS9P38999 BDH2YAL061W 1254 nt13.48□□□□□ -0.25
LYS9P38999 PHO4YFR034C 939 nt13.43□□□□□ -0.26
LYS9P38999 YBL100CYBL100C 315 nt13.43□□□□□ -0.26
LYS9P38999 HOM6YJR139C 1080 nt13.41□□□□□ -0.26
LYS9P38999 MNP1YGL068W 585 nt13.35□□□□□ -0.27
LYS9P38999 YFL021C-AYFL021C-A 855 nt13.34□□□□□ -0.27
LYS9P38999 LSM3YLR438C-A 270 nt13.3□□□□□ -0.28
LYS9P38999 FUN26YAL022C 1554 nt13.26□□□□□ -0.29
LYS9P38999 TRM9YML014W 840 nt13.25□□□□□ -0.29
LYS9P38999 YOR139CYOR139C 393 nt13.25□□□□□ -0.29
LYS9P38999 RKM5YLR137W 1104 nt13.22□□□□□ -0.29
LYS9P38999 NPL3YDR432W 1245 nt13.2□□□□□ -0.3
LYS9P38999 YPS1YLR120C 1710 nt13.15□□□□□ -0.3
LYS9P38999 YOL037CYOL037C 354 nt13.14□□□□□ -0.31
LYS9P38999 SPT5YML010W 3192 nt13.11□□□□□ -0.31
LYS9P38999 ALF1YNL148C 765 nt13.1□□□□□ -0.31
LYS9P38999 CCT6YDR188W 1641 nt13.09□□□□□ -0.31
LYS9P38999 YDR095CYDR095C 411 nt13.06□□□□□ -0.32
LYS9P38999 YHR165W-AYHR165W-A 312 nt13.05□□□□□ -0.32
LYS9P38999 SUF2tP(AGG)C 72 nt13.01□□□□□ -0.33
LYS9P38999 SUF10tP(AGG)N 72 nt13.01□□□□□ -0.33
LYS9P38999 MEP2YNL142W 1500 nt12.98□□□□□ -0.33
LYS9P38999 SIS1YNL007C 1059 nt12.85□□□□□ -0.35
LYS9P38999 RPP2AYOL039W 321 nt12.84□□□□□ -0.35
LYS9P38999 YLR281CYLR281C 468 nt12.82□□□□□ -0.36
LYS9P38999 WHI5YOR083W 888 nt12.79□□□□□ -0.36
LYS9P38999 DCW1YKL046C 1350 nt12.78□□□□□ -0.36
LYS9P38999 YLR154C-GYLR154C-G 150 nt12.77□□□□□ -0.37
LYS9P38999 tM(CAU)CtM(CAU)C 72 nt12.75□□□□□ -0.37
LYS9P38999 IMT4tM(CAU)E 72 nt12.75□□□□□ -0.37
Retrieved 100 of 7,029 protein–RNA pairs in 14.7 ms