RNA–Protein interactions for RNA: YKL027W

TCD2, Transcript of tRNA threonylcarbamoyladenosine dehydratase, yeastyeast

Gene TCD2, Length 1,344 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TCD2YKL027W SML1Q04964 104 aa12.29□□□□□ -0.44
TCD2YKL027W DIS3Q08162 1001 aaKnown RBP12.29□□□□□ -0.44
TCD2YKL027W MDM38Q08179 573 aa12.29□□□□□ -0.44
TCD2YKL027W GFA1P14742 717 aaKnown RBP12.28□□□□□ -0.44
TCD2YKL027W AEP2P22136 580 aa12.28□□□□□ -0.44
TCD2YKL027W ABD1P32783 436 aaPredicted RBP12.28□□□□□ -0.44
TCD2YKL027W PEX2P32800 271 aa12.28□□□□□ -0.44
TCD2YKL027W YIR016WP40572 265 aa12.28□□□□□ -0.44
TCD2YKL027W PFD1P46988 109 aa12.28□□□□□ -0.44
TCD2YKL027W PUF3Q07807 879 aaKnown RBP RIP-Chip data12.28□□□□□ -0.44not detected
TCD2YKL027W NBP2Q12163 236 aa12.28□□□□□ -0.44
TCD2YKL027W HRT3Q12347 344 aa12.28□□□□□ -0.44
TCD2YKL027W PUT4P15380 627 aa12.27□□□□□ -0.45
TCD2YKL027W DBF4P32325 704 aa12.27□□□□□ -0.45
TCD2YKL027W ABZ1P37254 787 aaPredicted RBP12.27□□□□□ -0.45
TCD2YKL027W PCM1P38628 557 aaKnown RBP12.27□□□□□ -0.45
TCD2YKL027W NDC80P40460 691 aa12.27□□□□□ -0.45
TCD2YKL027W ASG7P46993 209 aa12.27□□□□□ -0.45
TCD2YKL027W SLG1P54867 378 aa12.27□□□□□ -0.45
TCD2YKL027W TAF9Q05027 157 aa12.27□□□□□ -0.45
TCD2YKL027W AIM39Q08223 395 aa12.27□□□□□ -0.45
TCD2YKL027W YOR059CQ08448 450 aaKnown RBP12.27□□□□□ -0.45
TCD2YKL027W CIR2Q08822 631 aa12.27□□□□□ -0.45
TCD2YKL027W RCK2P38623 610 aa12.26□□□□□ -0.45
TCD2YKL027W PMC1P38929 1173 aaPredicted RBP12.26□□□□□ -0.45
TCD2YKL027W YLR257WQ06146 321 aaKnown RBP12.26□□□□□ -0.45
TCD2YKL027W EMP46Q12396 444 aa12.26□□□□□ -0.45
TCD2YKL027W KAR3P17119 729 aa12.25□□□□□ -0.45
TCD2YKL027W SEC1P30619 724 aaKnown RBP12.25□□□□□ -0.45
TCD2YKL027W SEG2P34250 1132 aa12.25□□□□□ -0.45
TCD2YKL027W RRT2P38332 387 aa12.25□□□□□ -0.45
TCD2YKL027W TMN3P40071 706 aa12.25□□□□□ -0.45
TCD2YKL027W ASG1P40467 964 aa12.25□□□□□ -0.45
TCD2YKL027W GUF1P46943 645 aa12.25□□□□□ -0.45
TCD2YKL027W YVH1Q02256 364 aaKnown RBP12.25□□□□□ -0.45
TCD2YKL027W GYL1Q04322 720 aa12.25□□□□□ -0.45
TCD2YKL027W RCL1Q08096 367 aaPredicted RBP12.25□□□□□ -0.45
TCD2YKL027W DDC1Q08949 612 aa12.25□□□□□ -0.45
TCD2YKL027W PDR1P12383 1068 aa12.24□□□□□ -0.45
TCD2YKL027W SRB2P34162 210 aa12.24□□□□□ -0.45
TCD2YKL027W TSA1P34760 196 aaKnown RBP12.24□□□□□ -0.45
TCD2YKL027W MAF1P41910 395 aa12.24□□□□□ -0.45
TCD2YKL027W YPL062WQ02781 134 aa12.24□□□□□ -0.45
TCD2YKL027W DIG1Q03063 452 aaKnown RBP12.24□□□□□ -0.45
TCD2YKL027W YMR114CQ04471 368 aaKnown RBP12.24□□□□□ -0.45
TCD2YKL027W MCM16Q12262 181 aa12.24□□□□□ -0.45
TCD2YKL027W VPS5Q92331 675 aa12.24□□□□□ -0.45
TCD2YKL027W YLR462WO13556 202 aa12.23□□□□□ -0.45
TCD2YKL027W CDC27P38042 758 aa12.23□□□□□ -0.45
TCD2YKL027W YBR056WP38081 501 aa12.23□□□□□ -0.45
TCD2YKL027W YHL049CP38722 271 aa12.23□□□□□ -0.45
TCD2YKL027W YER189WP40104 122 aa12.23□□□□□ -0.45
TCD2YKL027W YFL064CP43540 174 aa12.23□□□□□ -0.45
TCD2YKL027W BRO1P48582 844 aa12.23□□□□□ -0.45
TCD2YKL027W POB3Q04636 552 aaKnown RBP12.23□□□□□ -0.45
TCD2YKL027W IVY1Q04934 453 aa12.23□□□□□ -0.45
TCD2YKL027W PIG1Q06216 648 aa12.23□□□□□ -0.45
TCD2YKL027W SPE3Q12074 293 aaKnown RBP12.23□□□□□ -0.45
TCD2YKL027W YBL111CQ3E7Y5 667 aa12.23□□□□□ -0.45
TCD2YKL027W YPR117WQ06116 2489 aa12.23□□□□□ -0.45
TCD2YKL027W RGR1P19263 1082 aa12.22□□□□□ -0.45
TCD2YKL027W SIF2P38262 535 aa12.22□□□□□ -0.45
TCD2YKL027W SWC5P38326 303 aa12.22□□□□□ -0.45
TCD2YKL027W SAF1P38352 637 aa12.22□□□□□ -0.45
TCD2YKL027W LYS9P38999 446 aa12.22□□□□□ -0.45
TCD2YKL027W FHL1P39521 936 aa12.22□□□□□ -0.45
TCD2YKL027W YNL108CP53929 270 aa12.22□□□□□ -0.45
TCD2YKL027W CEG1Q01159 459 aaPredicted RBP12.22□□□□□ -0.45
TCD2YKL027W SPE1P08432 466 aa12.21□□□□□ -0.45
TCD2YKL027W PET111P08468 800 aa12.21□□□□□ -0.45
TCD2YKL027W TRX1P22217 103 aaKnown RBP12.21□□□□□ -0.45
TCD2YKL027W YEL043WP32618 956 aa12.21□□□□□ -0.45
TCD2YKL027W YBL055CP34220 418 aaPredicted RBP12.21□□□□□ -0.45
TCD2YKL027W LCP5P40079 357 aaPredicted RBP12.21□□□□□ -0.45
TCD2YKL027W CDC1P40986 491 aa12.21□□□□□ -0.45
TCD2YKL027W VTC4P47075 721 aa12.21□□□□□ -0.45
TCD2YKL027W MTD1Q02046 320 aaKnown RBP12.21□□□□□ -0.45
TCD2YKL027W THI20Q08224 551 aa12.21□□□□□ -0.45
TCD2YKL027W YRR1Q12172 810 aa12.21□□□□□ -0.45
TCD2YKL027W YPK1P12688 680 aaKnown RBP12.2□□□□□ -0.46
TCD2YKL027W PMS1P14242 873 aa12.2□□□□□ -0.46
TCD2YKL027W PDE1P22434 369 aa12.2□□□□□ -0.46
TCD2YKL027W DSS4P32601 143 aa12.2□□□□□ -0.46
TCD2YKL027W YKR051WP36142 418 aa12.2□□□□□ -0.46
TCD2YKL027W YBR053CP38235 358 aa12.2□□□□□ -0.46
TCD2YKL027W CWC22P53333 577 aaKnown RBP12.2□□□□□ -0.46
TCD2YKL027W YNL247WP53852 767 aaKnown RBP12.2□□□□□ -0.46
TCD2YKL027W VPS60Q03390 229 aa12.2□□□□□ -0.46
TCD2YKL027W HER2Q03557 464 aa12.2□□□□□ -0.46
TCD2YKL027W HRD3Q05787 833 aa12.2□□□□□ -0.46
TCD2YKL027W HMG2P12684 1045 aa12.19□□□□□ -0.46
TCD2YKL027W PEX1P24004 1043 aa12.19□□□□□ -0.46
TCD2YKL027W DPB3P27344 201 aa12.19□□□□□ -0.46
TCD2YKL027W HSL7P38274 827 aa12.19□□□□□ -0.46
TCD2YKL027W SSP1P38871 571 aa12.19□□□□□ -0.46
TCD2YKL027W SMF1P38925 575 aa12.19□□□□□ -0.46
TCD2YKL027W YIL054WP40524 105 aa12.19□□□□□ -0.46
TCD2YKL027W SAP185P40856 1058 aa12.19□□□□□ -0.46
TCD2YKL027W FMP25Q08023 583 aa12.19□□□□□ -0.46
TCD2YKL027W SPO21Q12411 609 aa12.19□□□□□ -0.46
Retrieved 100 of 5,963 RNA–protein pairs in 52.7 ms