Protein–RNA interactions for Protein: P24004

PEX1, Peroxisomal ATPase PEX1, yeastyeast

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PEX1P24004 YML009W-BYML009W-B 477 nt21.52■■□□□ 1.04
PEX1P24004 NOP1YDL014W 984 nt21.07■□□□□ 0.96
PEX1P24004 NSR1YGR159C 1245 nt21.02■□□□□ 0.96
PEX1P24004 YKL036CYKL036C 393 nt19.89■□□□□ 0.77
PEX1P24004 Q0297Q0297 156 nt18.66■□□□□ 0.58
PEX1P24004 YJL027CYJL027C 417 nt18.62■□□□□ 0.57
PEX1P24004 SRX1YKL086W 384 nt18.46■□□□□ 0.55
PEX1P24004 SCS3YGL126W 1143 nt18.36■□□□□ 0.53
PEX1P24004 MDJ1YFL016C 1536 nt18.26■□□□□ 0.51
PEX1P24004 YCR051WYCR051W 669 nt17.49■□□□□ 0.39
PEX1P24004 YOL085CYOL085C 342 nt17.24■□□□□ 0.35
PEX1P24004 PKP1YIL042C 1185 nt16.9■□□□□ 0.3
PEX1P24004 SCJ1YMR214W 1134 nt16.8■□□□□ 0.28
PEX1P24004 RPP1BYDL130W 321 nt16.72■□□□□ 0.27
PEX1P24004 ATS1YAL020C 1002 nt16.53■□□□□ 0.24
PEX1P24004 TRN1tP(UGG)A 72 nt16.46■□□□□ 0.23
PEX1P24004 SUF9tP(UGG)F 72 nt16.46■□□□□ 0.23
PEX1P24004 SUF8tP(UGG)H 72 nt16.46■□□□□ 0.23
PEX1P24004 tP(UGG)LtP(UGG)L 72 nt16.46■□□□□ 0.23
PEX1P24004 SUF7tP(UGG)M 72 nt16.46■□□□□ 0.23
PEX1P24004 tP(UGG)N1tP(UGG)N1 72 nt16.46■□□□□ 0.23
PEX1P24004 tP(UGG)N2tP(UGG)N2 72 nt16.46■□□□□ 0.23
PEX1P24004 tP(UGG)O1tP(UGG)O1 72 nt16.46■□□□□ 0.23
PEX1P24004 SUF11tP(UGG)O2 72 nt16.46■□□□□ 0.23
PEX1P24004 DBP2YNL112W 1641 nt16.4■□□□□ 0.22
PEX1P24004 CCC1YLR220W 969 nt16.22■□□□□ 0.19
PEX1P24004 PET122YER153C 765 nt15.94■□□□□ 0.14
PEX1P24004 SCR1SCR1 522 nt15.82■□□□□ 0.12
PEX1P24004 tP(UGG)O3tP(UGG)O3 72 nt15.69■□□□□ 0.1
PEX1P24004 RRN5YLR141W 1092 nt15.51■□□□□ 0.07
PEX1P24004 YBR190WYBR190W 312 nt15.45■□□□□ 0.06
PEX1P24004 RVS167YDR388W 1449 nt15.4■□□□□ 0.06
PEX1P24004 RSB1YOR049C 1065 nt15.28■□□□□ 0.04
PEX1P24004 PST2YDR032C 597 nt15.27■□□□□ 0.04
PEX1P24004 RTC3YHR087W 336 nt15.25■□□□□ 0.03
PEX1P24004 YER088W-BYER088W-B 147 nt15.23■□□□□ 0.03
PEX1P24004 YDJ1YNL064C 1230 nt15.18■□□□□ 0.02
PEX1P24004 SHR5YOL110W 714 nt15.02■□□□□ -0
PEX1P24004 YKL097CYKL097C 411 nt14.84□□□□□ -0.03
PEX1P24004 GAR1YHR089C 618 nt14.74□□□□□ -0.05
PEX1P24004 SSA3YBL075C 1950 nt14.58□□□□□ -0.07
PEX1P24004 SHU1YHL006C 453 nt14.53□□□□□ -0.08
PEX1P24004 DEP1YAL013W 1218 nt14.42□□□□□ -0.1
PEX1P24004 URN1YPR152C 1398 nt14.32□□□□□ -0.12
PEX1P24004 YNL208WYNL208W 600 nt14.25□□□□□ -0.13
PEX1P24004 TIR1YER011W 765 nt14.24□□□□□ -0.13
PEX1P24004 YOR139CYOR139C 393 nt14.24□□□□□ -0.13
PEX1P24004 RPN10YHR200W 807 nt14.16□□□□□ -0.14
PEX1P24004 YAL037C-BYAL037C-B 975 nt14.14□□□□□ -0.15
PEX1P24004 OPI9YLR338W 858 nt14.04□□□□□ -0.16
PEX1P24004 SSA1YAL005C 1929 nt14.02□□□□□ -0.16
PEX1P24004 SRB2YHR041C 633 nt13.93□□□□□ -0.18
PEX1P24004 NPL3YDR432W 1245 nt13.92□□□□□ -0.18
PEX1P24004 SAH1YER043C 1350 nt13.83□□□□□ -0.2
PEX1P24004 HOM6YJR139C 1080 nt13.76□□□□□ -0.21
PEX1P24004 MNP1YGL068W 585 nt13.75□□□□□ -0.21
PEX1P24004 YGR021WYGR021W 873 nt13.74□□□□□ -0.21
PEX1P24004 PUT4YOR348C 1884 nt13.74□□□□□ -0.21
PEX1P24004 WWM1YFL010C 636 nt13.71□□□□□ -0.21
PEX1P24004 YJR018WYJR018W 363 nt13.67□□□□□ -0.22
PEX1P24004 YJR120WYJR120W 351 nt13.67□□□□□ -0.22
PEX1P24004 YOL037CYOL037C 354 nt13.67□□□□□ -0.22
PEX1P24004 ARE1YCR048W 1833 nt13.63□□□□□ -0.23
PEX1P24004 tM(CAU)CtM(CAU)C 72 nt13.63□□□□□ -0.23
PEX1P24004 IMT4tM(CAU)E 72 nt13.63□□□□□ -0.23
PEX1P24004 IMT3tM(CAU)J3 72 nt13.63□□□□□ -0.23
PEX1P24004 IMT1tM(CAU)O1 72 nt13.63□□□□□ -0.23
PEX1P24004 IMT2tM(CAU)P 72 nt13.63□□□□□ -0.23
PEX1P24004 PUN1YLR414C 792 nt13.61□□□□□ -0.23
PEX1P24004 RKM5YLR137W 1104 nt13.54□□□□□ -0.24
PEX1P24004 RPP2BYDR382W 333 nt13.47□□□□□ -0.25
PEX1P24004 YFL021C-AYFL021C-A 855 nt13.47□□□□□ -0.25
PEX1P24004 YHR049C-AYHR049C-A 297 nt13.41□□□□□ -0.26
PEX1P24004 PTC2YER089C 1395 nt13.37□□□□□ -0.27
PEX1P24004 YLR281CYLR281C 468 nt13.36□□□□□ -0.27
PEX1P24004 BDH2YAL061W 1254 nt13.34□□□□□ -0.27
PEX1P24004 PUS2YGL063W 1113 nt13.32□□□□□ -0.28
PEX1P24004 POA1YBR022W 534 nt13.29□□□□□ -0.28
PEX1P24004 MOT3YMR070W 1473 nt13.27□□□□□ -0.29
PEX1P24004 LSM3YLR438C-A 270 nt13.26□□□□□ -0.29
PEX1P24004 WHI5YOR083W 888 nt13.22□□□□□ -0.29
PEX1P24004 NAB2YGL122C 1578 nt13.13□□□□□ -0.31
PEX1P24004 INM2YDR287W 879 nt13.12□□□□□ -0.31
PEX1P24004 YBL100CYBL100C 315 nt13.09□□□□□ -0.31
PEX1P24004 BUD23YCR047C 828 nt13.08□□□□□ -0.32
PEX1P24004 FIS1YIL065C 468 nt13.07□□□□□ -0.32
PEX1P24004 YPR011CYPR011C 981 nt13.06□□□□□ -0.32
PEX1P24004 DAL1YIR027C 1383 nt13.06□□□□□ -0.32
PEX1P24004 YLR236CYLR236C 324 nt13□□□□□ -0.33
PEX1P24004 FMP45YDL222C 930 nt12.99□□□□□ -0.33
PEX1P24004 DSK2YMR276W 1122 nt12.99□□□□□ -0.33
PEX1P24004 BSC6YOL137W 1494 nt12.97□□□□□ -0.33
PEX1P24004 FPR4YLR449W 1179 nt12.97□□□□□ -0.33
PEX1P24004 TRM9YML014W 840 nt12.97□□□□□ -0.33
PEX1P24004 FUN26YAL022C 1554 nt12.95□□□□□ -0.34
PEX1P24004 PHO4YFR034C 939 nt12.95□□□□□ -0.34
PEX1P24004 MRPL8YJL063C 717 nt12.91□□□□□ -0.34
PEX1P24004 YCH1YGR203W 447 nt12.9□□□□□ -0.34
PEX1P24004 IMP2'YIL154C 1041 nt12.9□□□□□ -0.34
PEX1P24004 YLR154C-GYLR154C-G 150 nt12.89□□□□□ -0.35
Retrieved 100 of 7,029 protein–RNA pairs in 14.8 ms