Protein–RNA interactions for Protein: P22434

PDE1, 3',5'-cyclic-nucleotide phosphodiesterase 1, yeastyeast

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PDE1P22434 YML009W-BYML009W-B 477 nt21.46■■□□□ 1.03
PDE1P22434 NSR1YGR159C 1245 nt21.08■□□□□ 0.97
PDE1P22434 NOP1YDL014W 984 nt21.04■□□□□ 0.96
PDE1P22434 YKL036CYKL036C 393 nt19.75■□□□□ 0.75
PDE1P22434 Q0297Q0297 156 nt18.58■□□□□ 0.56
PDE1P22434 YJL027CYJL027C 417 nt18.47■□□□□ 0.55
PDE1P22434 SRX1YKL086W 384 nt18.41■□□□□ 0.54
PDE1P22434 MDJ1YFL016C 1536 nt18.33■□□□□ 0.52
PDE1P22434 SCS3YGL126W 1143 nt18.16■□□□□ 0.5
PDE1P22434 YCR051WYCR051W 669 nt17.43■□□□□ 0.38
PDE1P22434 YOL085CYOL085C 342 nt17.1■□□□□ 0.33
PDE1P22434 PKP1YIL042C 1185 nt16.74■□□□□ 0.27
PDE1P22434 RPP1BYDL130W 321 nt16.65■□□□□ 0.26
PDE1P22434 SCJ1YMR214W 1134 nt16.59■□□□□ 0.25
PDE1P22434 TRN1tP(UGG)A 72 nt16.44■□□□□ 0.22
PDE1P22434 SUF9tP(UGG)F 72 nt16.44■□□□□ 0.22
PDE1P22434 SUF8tP(UGG)H 72 nt16.44■□□□□ 0.22
PDE1P22434 tP(UGG)LtP(UGG)L 72 nt16.44■□□□□ 0.22
PDE1P22434 SUF7tP(UGG)M 72 nt16.44■□□□□ 0.22
PDE1P22434 tP(UGG)N1tP(UGG)N1 72 nt16.44■□□□□ 0.22
PDE1P22434 tP(UGG)N2tP(UGG)N2 72 nt16.44■□□□□ 0.22
PDE1P22434 tP(UGG)O1tP(UGG)O1 72 nt16.44■□□□□ 0.22
PDE1P22434 SUF11tP(UGG)O2 72 nt16.44■□□□□ 0.22
PDE1P22434 DBP2YNL112W 1641 nt16.41■□□□□ 0.22
PDE1P22434 ATS1YAL020C 1002 nt16.34■□□□□ 0.21
PDE1P22434 CCC1YLR220W 969 nt16.18■□□□□ 0.18
PDE1P22434 PET122YER153C 765 nt15.85■□□□□ 0.13
PDE1P22434 SCR1SCR1 522 nt15.76■□□□□ 0.11
PDE1P22434 tP(UGG)O3tP(UGG)O3 72 nt15.66■□□□□ 0.1
PDE1P22434 YBR190WYBR190W 312 nt15.58■□□□□ 0.08
PDE1P22434 RVS167YDR388W 1449 nt15.48■□□□□ 0.07
PDE1P22434 RRN5YLR141W 1092 nt15.41■□□□□ 0.06
PDE1P22434 RTC3YHR087W 336 nt15.18■□□□□ 0.02
PDE1P22434 RSB1YOR049C 1065 nt15.18■□□□□ 0.02
PDE1P22434 YDJ1YNL064C 1230 nt15.17■□□□□ 0.02
PDE1P22434 YER088W-BYER088W-B 147 nt15.13■□□□□ 0.01
PDE1P22434 PST2YDR032C 597 nt15.09■□□□□ 0.01
PDE1P22434 SHR5YOL110W 714 nt15.06■□□□□ 0
PDE1P22434 GAR1YHR089C 618 nt14.71□□□□□ -0.05
PDE1P22434 YKL097CYKL097C 411 nt14.65□□□□□ -0.06
PDE1P22434 DEP1YAL013W 1218 nt14.43□□□□□ -0.1
PDE1P22434 URN1YPR152C 1398 nt14.38□□□□□ -0.11
PDE1P22434 SHU1YHL006C 453 nt14.37□□□□□ -0.11
PDE1P22434 YNL208WYNL208W 600 nt14.31□□□□□ -0.12
PDE1P22434 RPN10YHR200W 807 nt14.27□□□□□ -0.13
PDE1P22434 TIR1YER011W 765 nt14.23□□□□□ -0.13
PDE1P22434 OPI9YLR338W 858 nt14.13□□□□□ -0.15
PDE1P22434 YOR139CYOR139C 393 nt14.02□□□□□ -0.17
PDE1P22434 YAL037C-BYAL037C-B 975 nt13.99□□□□□ -0.17
PDE1P22434 SSA1YAL005C 1929 nt13.98□□□□□ -0.17
PDE1P22434 SAH1YER043C 1350 nt13.91□□□□□ -0.18
PDE1P22434 PUT4YOR348C 1884 nt13.87□□□□□ -0.19
PDE1P22434 SRB2YHR041C 633 nt13.82□□□□□ -0.2
PDE1P22434 NPL3YDR432W 1245 nt13.79□□□□□ -0.2
PDE1P22434 YJR018WYJR018W 363 nt13.75□□□□□ -0.21
PDE1P22434 ARE1YCR048W 1833 nt13.73□□□□□ -0.21
PDE1P22434 YGR021WYGR021W 873 nt13.72□□□□□ -0.21
PDE1P22434 PUN1YLR414C 792 nt13.72□□□□□ -0.21
PDE1P22434 HOM6YJR139C 1080 nt13.69□□□□□ -0.22
PDE1P22434 YJR120WYJR120W 351 nt13.66□□□□□ -0.22
PDE1P22434 WWM1YFL010C 636 nt13.64□□□□□ -0.23
PDE1P22434 MNP1YGL068W 585 nt13.64□□□□□ -0.23
PDE1P22434 YOL037CYOL037C 354 nt13.6□□□□□ -0.23
PDE1P22434 RPP2BYDR382W 333 nt13.56□□□□□ -0.24
PDE1P22434 YHR049C-AYHR049C-A 297 nt13.52□□□□□ -0.25
PDE1P22434 RKM5YLR137W 1104 nt13.48□□□□□ -0.25
PDE1P22434 SSA3YBL075C 1950 nt13.47□□□□□ -0.25
PDE1P22434 YFL021C-AYFL021C-A 855 nt13.46□□□□□ -0.25
PDE1P22434 PTC2YER089C 1395 nt13.45□□□□□ -0.26
PDE1P22434 tM(CAU)CtM(CAU)C 72 nt13.45□□□□□ -0.26
PDE1P22434 IMT4tM(CAU)E 72 nt13.45□□□□□ -0.26
PDE1P22434 IMT3tM(CAU)J3 72 nt13.45□□□□□ -0.26
PDE1P22434 IMT1tM(CAU)O1 72 nt13.45□□□□□ -0.26
PDE1P22434 IMT2tM(CAU)P 72 nt13.45□□□□□ -0.26
PDE1P22434 POA1YBR022W 534 nt13.42□□□□□ -0.26
PDE1P22434 BDH2YAL061W 1254 nt13.38□□□□□ -0.27
PDE1P22434 LSM3YLR438C-A 270 nt13.29□□□□□ -0.28
PDE1P22434 NAB2YGL122C 1578 nt13.25□□□□□ -0.29
PDE1P22434 YLR281CYLR281C 468 nt13.24□□□□□ -0.29
PDE1P22434 INM2YDR287W 879 nt13.23□□□□□ -0.29
PDE1P22434 BUD23YCR047C 828 nt13.19□□□□□ -0.3
PDE1P22434 PUS2YGL063W 1113 nt13.19□□□□□ -0.3
PDE1P22434 DAL1YIR027C 1383 nt13.16□□□□□ -0.3
PDE1P22434 YBL100CYBL100C 315 nt13.14□□□□□ -0.31
PDE1P22434 FIS1YIL065C 468 nt13.13□□□□□ -0.31
PDE1P22434 WHI5YOR083W 888 nt13.12□□□□□ -0.31
PDE1P22434 BSC6YOL137W 1494 nt13.09□□□□□ -0.31
PDE1P22434 MOT3YMR070W 1473 nt13.07□□□□□ -0.32
PDE1P22434 FPR4YLR449W 1179 nt13.05□□□□□ -0.32
PDE1P22434 PHO4YFR034C 939 nt13.03□□□□□ -0.32
PDE1P22434 TRM9YML014W 840 nt13.03□□□□□ -0.32
PDE1P22434 FUN26YAL022C 1554 nt13.01□□□□□ -0.33
PDE1P22434 CCT6YDR188W 1641 nt12.93□□□□□ -0.34
PDE1P22434 DSK2YMR276W 1122 nt12.9□□□□□ -0.34
PDE1P22434 YPR011CYPR011C 981 nt12.89□□□□□ -0.35
PDE1P22434 IMP2'YIL154C 1041 nt12.88□□□□□ -0.35
PDE1P22434 YLR154C-GYLR154C-G 150 nt12.86□□□□□ -0.35
PDE1P22434 FMP45YDL222C 930 nt12.85□□□□□ -0.35
PDE1P22434 YLR236CYLR236C 324 nt12.84□□□□□ -0.35
PDE1P22434 SUF2tP(AGG)C 72 nt12.77□□□□□ -0.37
Retrieved 100 of 7,029 protein–RNA pairs in 6.4 ms