RNA–Protein interactions for RNA: YLR228C

ECM22, Transcript of Sterol regulatory element binding protein, yeast

Gene ECM22, Length 2,445 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ECM22	YLR228C	PEX5	P35056	612 aa		4.19	□□□□□ -1.74
ECM22	YLR228C	MCD4	P36051	919 aa		4.19	□□□□□ -1.74
ECM22	YLR228C	MRX3	P38172	270 aa		4.19	□□□□□ -1.74
ECM22	YLR228C	IFA38	P38286	347 aa		4.19	□□□□□ -1.74
ECM22	YLR228C	SWD1	P39706	426 aa		4.19	□□□□□ -1.74
ECM22	YLR228C	SWP82	P43554	623 aa		4.19	□□□□□ -1.74
ECM22	YLR228C	NUP42	P49686	430 aa	Known RBP	4.19	□□□□□ -1.74
ECM22	YLR228C	UBA2	P52488	636 aa		4.19	□□□□□ -1.74
ECM22	YLR228C	DCP2	P53550	970 aa	Known RBP	4.19	□□□□□ -1.74
ECM22	YLR228C	TOF1	P53840	1238 aa		4.19	□□□□□ -1.74
ECM22	YLR228C	CWC25	P53854	179 aa	Known RBP	4.19	□□□□□ -1.74
ECM22	YLR228C	YNL058C	P53947	316 aa		4.19	□□□□□ -1.74
ECM22	YLR228C	UBP2	Q01476	1272 aa		4.19	□□□□□ -1.74
ECM22	YLR228C	YEH2	Q07950	538 aa		4.19	□□□□□ -1.74
ECM22	YLR228C	ATP16	Q12165	160 aa		4.19	□□□□□ -1.74
ECM22	YLR228C	APM4	Q99186	491 aa		4.19	□□□□□ -1.74
ECM22	YLR228C	SSK22	P25390	1331 aa	Predicted RBP	4.19	□□□□□ -1.74
ECM22	YLR228C	PPR1	P07272	904 aa	Predicted RBP	4.19	□□□□□ -1.74
ECM22	YLR228C	GBP2	P25555	427 aa	Known RBP RIP-Chip data	4.19	□□□□□ -1.74	not detected
ECM22	YLR228C	RPS5	P26783	225 aa	Known RBP	4.19	□□□□□ -1.74
ECM22	YLR228C	VHR2	P40041	505 aa		4.19	□□□□□ -1.74
ECM22	YLR228C	ULP2	P40537	1034 aa	Predicted RBP	4.19	□□□□□ -1.74
ECM22	YLR228C	EMW1	P42842	904 aa	Known RBP	4.19	□□□□□ -1.74
ECM22	YLR228C	IES1	P43579	692 aa		4.19	□□□□□ -1.74
ECM22	YLR228C	YJR054W	P47114	497 aa		4.19	□□□□□ -1.74
ECM22	YLR228C	LSC2	P53312	427 aa		4.19	□□□□□ -1.74
ECM22	YLR228C	UBX4	P54730	416 aa		4.19	□□□□□ -1.74
ECM22	YLR228C	TAF12	Q03761	539 aa		4.19	□□□□□ -1.74
ECM22	YLR228C	NNT1	Q05874	261 aa		4.19	□□□□□ -1.74
ECM22	YLR228C	MCM21	Q06675	368 aa		4.19	□□□□□ -1.74
ECM22	YLR228C	SYO1	Q07395	620 aa		4.19	□□□□□ -1.74
ECM22	YLR228C	SGO1	Q08490	590 aa		4.19	□□□□□ -1.74
ECM22	YLR228C	RAD61	Q99359	647 aa		4.19	□□□□□ -1.74
ECM22	YLR228C	COX6	P00427	148 aa		4.18	□□□□□ -1.74
ECM22	YLR228C	RPB4	P20433	221 aa	Predicted RBP	4.18	□□□□□ -1.74
ECM22	YLR228C	RET1	P22276	1149 aa	Known RBP	4.18	□□□□□ -1.74
ECM22	YLR228C	OCA4	P25366	362 aa		4.18	□□□□□ -1.74
ECM22	YLR228C	PEP3	P27801	918 aa		4.18	□□□□□ -1.74
ECM22	YLR228C	MGM1	P32266	881 aa		4.18	□□□□□ -1.74
ECM22	YLR228C	RPC25	P35718	212 aa		4.18	□□□□□ -1.74
ECM22	YLR228C	HES1	P35843	434 aa		4.18	□□□□□ -1.74
ECM22	YLR228C	TYS1	P36421	394 aa	Known RBP	4.18	□□□□□ -1.74
ECM22	YLR228C	SLM4	P38247	162 aa		4.18	□□□□□ -1.74
ECM22	YLR228C	IOC3	P43596	787 aa		4.18	□□□□□ -1.74
ECM22	YLR228C	TY4A-J	P47023	414 aa		4.18	□□□□□ -1.74
ECM22	YLR228C	RPC17	P47076	161 aa		4.18	□□□□□ -1.74
ECM22	YLR228C	RMR1	P53060	241 aa		4.18	□□□□□ -1.74
ECM22	YLR228C	SPC105	P53148	917 aa		4.18	□□□□□ -1.74
ECM22	YLR228C	IPI3	P53877	555 aa		4.18	□□□□□ -1.74
ECM22	YLR228C	TUS1	Q06412	1307 aa		4.18	□□□□□ -1.74
ECM22	YLR228C	RPL6B	P05739	176 aa	Known RBP	4.17	□□□□□ -1.74
ECM22	YLR228C	ILS1	P09436	1072 aa	Known RBP	4.17	□□□□□ -1.74
ECM22	YLR228C	HSF1	P10961	833 aa		4.17	□□□□□ -1.74
ECM22	YLR228C	KIN2	P13186	1147 aa	Known RBP	4.17	□□□□□ -1.74
ECM22	YLR228C	PRP9	P19736	530 aa	Known RBP	4.17	□□□□□ -1.74
ECM22	YLR228C	MNN2	P38069	597 aa		4.17	□□□□□ -1.74
ECM22	YLR228C	KTR3	P38130	404 aa	Predicted RBP	4.17	□□□□□ -1.74
ECM22	YLR228C	GIP1	P38229	639 aa		4.17	□□□□□ -1.74
ECM22	YLR228C	PFF1	P38244	976 aa		4.17	□□□□□ -1.74
ECM22	YLR228C	APE4	P38821	490 aa		4.17	□□□□□ -1.74
ECM22	YLR228C	HXT6	P39003	570 aa	Known RBP	4.17	□□□□□ -1.74
ECM22	YLR228C	HXT7	P39004	570 aa		4.17	□□□□□ -1.74
ECM22	YLR228C	YTA12	P40341	825 aa		4.17	□□□□□ -1.74
ECM22	YLR228C	MET12	P46151	657 aa		4.17	□□□□□ -1.74
ECM22	YLR228C	NMD5	P46970	1048 aa		4.17	□□□□□ -1.74
ECM22	YLR228C	MDE1	P47095	244 aa		4.17	□□□□□ -1.74
ECM22	YLR228C	SSN8	P47821	323 aa		4.17	□□□□□ -1.74
ECM22	YLR228C	SRB7	P47822	140 aa		4.17	□□□□□ -1.74
ECM22	YLR228C	ISM1	P48526	1002 aa		4.17	□□□□□ -1.74
ECM22	YLR228C	PAN2	P53010	1115 aa	Predicted RBP	4.17	□□□□□ -1.74
ECM22	YLR228C	CUE3	P53137	624 aa	Known RBP	4.17	□□□□□ -1.74
ECM22	YLR228C	HMO1	Q03973	246 aa	Known RBP	4.17	□□□□□ -1.74
ECM22	YLR228C	ARR2	Q06597	130 aa		4.17	□□□□□ -1.74
ECM22	YLR228C	ATG29	Q12092	213 aa		4.17	□□□□□ -1.74
ECM22	YLR228C	TAF3	Q12297	353 aa		4.17	□□□□□ -1.74
ECM22	YLR228C	MDM20	Q12387	796 aa	Known RBP	4.17	□□□□□ -1.74
ECM22	YLR228C	CLN2	P20438	545 aa		4.17	□□□□□ -1.74
ECM22	YLR228C	PUF4	P25339	888 aa	Known RBP RIP-Chip data	4.17	□□□□□ -1.74	not detected
ECM22	YLR228C	HXT1	P32465	570 aa		4.17	□□□□□ -1.74
ECM22	YLR228C	RFC3	P38629	340 aa		4.17	□□□□□ -1.74
ECM22	YLR228C	RPN10	P38886	268 aa	Known RBP	4.17	□□□□□ -1.74
ECM22	YLR228C	OAF1	P39720	1047 aa	Predicted RBP	4.17	□□□□□ -1.74
ECM22	YLR228C	MDV1	P47025	714 aa		4.17	□□□□□ -1.74
ECM22	YLR228C	DRN1	P53255	507 aa	Known RBP	4.17	□□□□□ -1.74
ECM22	YLR228C	YNR014W	P53719	212 aa		4.17	□□□□□ -1.74
ECM22	YLR228C	TFB3	Q03290	321 aa		4.17	□□□□□ -1.74
ECM22	YLR228C	ECI1	Q05871	280 aa		4.17	□□□□□ -1.74
ECM22	YLR228C	PSR2	Q07949	397 aa		4.17	□□□□□ -1.74
ECM22	YLR228C	MNL2	Q12205	849 aa		4.17	□□□□□ -1.74
ECM22	YLR228C	EMP46	Q12396	444 aa		4.17	□□□□□ -1.74
ECM22	YLR228C	ENT1	Q12518	454 aa		4.17	□□□□□ -1.74
ECM22	YLR228C	YOR111W	Q99210	232 aa		4.17	□□□□□ -1.74
ECM22	YLR228C	LAM4	P38800	1345 aa		4.17	□□□□□ -1.74
ECM22	YLR228C	SPS1	P08458	490 aa		4.16	□□□□□ -1.74
ECM22	YLR228C	HSP60	P19882	572 aa	Known RBP	4.16	□□□□□ -1.74
ECM22	YLR228C	RAM1	P22007	431 aa		4.16	□□□□□ -1.74
ECM22	YLR228C	CAD1	P24813	409 aa	Known RBP	4.16	□□□□□ -1.74
ECM22	YLR228C	SUV3	P32580	737 aa		4.16	□□□□□ -1.74
ECM22	YLR228C	VMA8	P32610	256 aa	Known RBP	4.16	□□□□□ -1.74
ECM22	YLR228C	MRPL40	P36534	297 aa		4.16	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 99.1 ms