Protein–RNA interactions for Protein: P38286

IFA38, Very-long-chain 3-oxoacyl-CoA reductase, yeastyeast

Predictions only

Length 347 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
IFA38P38286 YML009W-BYML009W-B 477 nt18.97■□□□□ 0.63
IFA38P38286 NSR1YGR159C 1245 nt18.86■□□□□ 0.61
IFA38P38286 NOP1YDL014W 984 nt18.61■□□□□ 0.57
IFA38P38286 YKL036CYKL036C 393 nt17.16■□□□□ 0.34
IFA38P38286 MDJ1YFL016C 1536 nt16.51■□□□□ 0.23
IFA38P38286 Q0297Q0297 156 nt16.22■□□□□ 0.19
IFA38P38286 SRX1YKL086W 384 nt16.17■□□□□ 0.18
IFA38P38286 YJL027CYJL027C 417 nt16.02■□□□□ 0.16
IFA38P38286 SCS3YGL126W 1143 nt15.55■□□□□ 0.08
IFA38P38286 YCR051WYCR051W 669 nt15.35■□□□□ 0.05
IFA38P38286 YOL085CYOL085C 342 nt14.8□□□□□ -0.04
IFA38P38286 SSA3YBL075C 1950 nt14.79□□□□□ -0.04
IFA38P38286 DBP2YNL112W 1641 nt14.61□□□□□ -0.07
IFA38P38286 RPP1BYDL130W 321 nt14.55□□□□□ -0.08
IFA38P38286 TRN1tP(UGG)A 72 nt14.52□□□□□ -0.09
IFA38P38286 SUF9tP(UGG)F 72 nt14.52□□□□□ -0.09
IFA38P38286 SUF8tP(UGG)H 72 nt14.52□□□□□ -0.09
IFA38P38286 tP(UGG)LtP(UGG)L 72 nt14.52□□□□□ -0.09
IFA38P38286 SUF7tP(UGG)M 72 nt14.52□□□□□ -0.09
IFA38P38286 tP(UGG)N1tP(UGG)N1 72 nt14.52□□□□□ -0.09
IFA38P38286 tP(UGG)N2tP(UGG)N2 72 nt14.52□□□□□ -0.09
IFA38P38286 tP(UGG)O1tP(UGG)O1 72 nt14.52□□□□□ -0.09
IFA38P38286 SUF11tP(UGG)O2 72 nt14.52□□□□□ -0.09
IFA38P38286 PKP1YIL042C 1185 nt14.51□□□□□ -0.09
IFA38P38286 CCC1YLR220W 969 nt14.39□□□□□ -0.11
IFA38P38286 YBR190WYBR190W 312 nt14.19□□□□□ -0.14
IFA38P38286 SCJ1YMR214W 1134 nt14.02□□□□□ -0.17
IFA38P38286 RVS167YDR388W 1449 nt13.98□□□□□ -0.17
IFA38P38286 ATS1YAL020C 1002 nt13.97□□□□□ -0.17
IFA38P38286 RTC3YHR087W 336 nt13.89□□□□□ -0.19
IFA38P38286 SCR1SCR1 522 nt13.86□□□□□ -0.19
IFA38P38286 PET122YER153C 765 nt13.82□□□□□ -0.2
IFA38P38286 tP(UGG)O3tP(UGG)O3 72 nt13.78□□□□□ -0.2
IFA38P38286 RRN5YLR141W 1092 nt13.47□□□□□ -0.25
IFA38P38286 SHR5YOL110W 714 nt13.44□□□□□ -0.26
IFA38P38286 YDJ1YNL064C 1230 nt13.38□□□□□ -0.27
IFA38P38286 RSB1YOR049C 1065 nt13.25□□□□□ -0.29
IFA38P38286 YER088W-BYER088W-B 147 nt13.19□□□□□ -0.3
IFA38P38286 GAR1YHR089C 618 nt13.02□□□□□ -0.33
IFA38P38286 PUT4YOR348C 1884 nt13.02□□□□□ -0.33
IFA38P38286 Q0182Q0182 405 nt13□□□□□ -0.33
IFA38P38286 URN1YPR152C 1398 nt12.98□□□□□ -0.33
IFA38P38286 RPN10YHR200W 807 nt12.95□□□□□ -0.34
IFA38P38286 DEP1YAL013W 1218 nt12.94□□□□□ -0.34
IFA38P38286 PST2YDR032C 597 nt12.91□□□□□ -0.34
IFA38P38286 YNL208WYNL208W 600 nt12.86□□□□□ -0.35
IFA38P38286 OPI9YLR338W 858 nt12.79□□□□□ -0.36
IFA38P38286 ARE1YCR048W 1833 nt12.66□□□□□ -0.38
IFA38P38286 SAH1YER043C 1350 nt12.64□□□□□ -0.39
IFA38P38286 POA1YBR022W 534 nt12.62□□□□□ -0.39
IFA38P38286 TIR1YER011W 765 nt12.59□□□□□ -0.39
IFA38P38286 PAC11YDR488C 1602 nt12.57□□□□□ -0.4
IFA38P38286 SSA4YER103W 1929 nt12.55□□□□□ -0.4
IFA38P38286 YHR049C-AYHR049C-A 297 nt12.54□□□□□ -0.4
IFA38P38286 MOT3YMR070W 1473 nt12.53□□□□□ -0.4
IFA38P38286 YKL097CYKL097C 411 nt12.5□□□□□ -0.41
IFA38P38286 PUN1YLR414C 792 nt12.49□□□□□ -0.41
IFA38P38286 BSC6YOL137W 1494 nt12.42□□□□□ -0.42
IFA38P38286 YJR018WYJR018W 363 nt12.42□□□□□ -0.42
IFA38P38286 NVJ2YPR091C 2313 nt12.4□□□□□ -0.42
IFA38P38286 SSA1YAL005C 1929 nt12.34□□□□□ -0.43
IFA38P38286 SHU1YHL006C 453 nt12.32□□□□□ -0.44
IFA38P38286 SPT5YML010W 3192 nt12.32□□□□□ -0.44
IFA38P38286 RPP2BYDR382W 333 nt12.29□□□□□ -0.44
IFA38P38286 BUD23YCR047C 828 nt12.26□□□□□ -0.45
IFA38P38286 PTC2YER089C 1395 nt12.24□□□□□ -0.45
IFA38P38286 BDF1YLR399C 2061 nt12.2□□□□□ -0.46
IFA38P38286 NAB2YGL122C 1578 nt12.12□□□□□ -0.47
IFA38P38286 FPS1YLL043W 2010 nt12.11□□□□□ -0.47
IFA38P38286 YGR021WYGR021W 873 nt12.09□□□□□ -0.47
IFA38P38286 YAL037C-BYAL037C-B 975 nt12.08□□□□□ -0.48
IFA38P38286 YJR120WYJR120W 351 nt12.06□□□□□ -0.48
IFA38P38286 INM2YDR287W 879 nt12.04□□□□□ -0.48
IFA38P38286 SRB2YHR041C 633 nt12.01□□□□□ -0.49
IFA38P38286 WWM1YFL010C 636 nt12□□□□□ -0.49
IFA38P38286 TAT1YBR069C 1860 nt12□□□□□ -0.49
IFA38P38286 BDH2YAL061W 1254 nt11.97□□□□□ -0.49
IFA38P38286 DAL1YIR027C 1383 nt11.96□□□□□ -0.49
IFA38P38286 HOM6YJR139C 1080 nt11.93□□□□□ -0.5
IFA38P38286 FPR4YLR449W 1179 nt11.93□□□□□ -0.5
IFA38P38286 YFL021C-AYFL021C-A 855 nt11.9□□□□□ -0.5
IFA38P38286 NPL3YDR432W 1245 nt11.89□□□□□ -0.51
IFA38P38286 LSM3YLR438C-A 270 nt11.87□□□□□ -0.51
IFA38P38286 YBL100CYBL100C 315 nt11.86□□□□□ -0.51
IFA38P38286 YOR139CYOR139C 393 nt11.85□□□□□ -0.51
IFA38P38286 FIS1YIL065C 468 nt11.82□□□□□ -0.52
IFA38P38286 MNP1YGL068W 585 nt11.81□□□□□ -0.52
IFA38P38286 YOL037CYOL037C 354 nt11.81□□□□□ -0.52
IFA38P38286 PHO4YFR034C 939 nt11.79□□□□□ -0.52
IFA38P38286 TRM9YML014W 840 nt11.79□□□□□ -0.52
IFA38P38286 RKM5YLR137W 1104 nt11.78□□□□□ -0.52
IFA38P38286 FUN26YAL022C 1554 nt11.71□□□□□ -0.54
IFA38P38286 MEP2YNL142W 1500 nt11.69□□□□□ -0.54
IFA38P38286 ALF1YNL148C 765 nt11.62□□□□□ -0.55
IFA38P38286 SUF2tP(AGG)C 72 nt11.6□□□□□ -0.55
IFA38P38286 SUF10tP(AGG)N 72 nt11.6□□□□□ -0.55
IFA38P38286 CCT6YDR188W 1641 nt11.6□□□□□ -0.55
IFA38P38286 YPS1YLR120C 1710 nt11.57□□□□□ -0.56
IFA38P38286 YHR165W-AYHR165W-A 312 nt11.52□□□□□ -0.57
IFA38P38286 DCW1YKL046C 1350 nt11.51□□□□□ -0.57
Retrieved 100 of 7,029 protein–RNA pairs in 40.4 ms