Protein–RNA interactions for Protein: P53854

CWC25, Pre-mRNA-splicing factor CWC25, yeastyeast

Known RBP Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CWC25P53854 NSR1YGR159C 1245 nt16.99■□□□□ 0.31
CWC25P53854 YML009W-BYML009W-B 477 nt16.79■□□□□ 0.28
CWC25P53854 NOP1YDL014W 984 nt16.27■□□□□ 0.2
CWC25P53854 MDJ1YFL016C 1536 nt15.22■□□□□ 0.03
CWC25P53854 YKL036CYKL036C 393 nt14.82□□□□□ -0.04
CWC25P53854 SSA3YBL075C 1950 nt14.72□□□□□ -0.05
CWC25P53854 SRX1YKL086W 384 nt14.26□□□□□ -0.13
CWC25P53854 Q0297Q0297 156 nt14.24□□□□□ -0.13
CWC25P53854 YJL027CYJL027C 417 nt14.02□□□□□ -0.17
CWC25P53854 DBP2YNL112W 1641 nt13.48□□□□□ -0.25
CWC25P53854 YCR051WYCR051W 669 nt13.43□□□□□ -0.26
CWC25P53854 SCS3YGL126W 1143 nt13.38□□□□□ -0.27
CWC25P53854 YBR190WYBR190W 312 nt13.21□□□□□ -0.29
CWC25P53854 TRN1tP(UGG)A 72 nt13.03□□□□□ -0.32
CWC25P53854 SUF9tP(UGG)F 72 nt13.03□□□□□ -0.32
CWC25P53854 SUF8tP(UGG)H 72 nt13.03□□□□□ -0.32
CWC25P53854 tP(UGG)LtP(UGG)L 72 nt13.03□□□□□ -0.32
CWC25P53854 SUF7tP(UGG)M 72 nt13.03□□□□□ -0.32
CWC25P53854 tP(UGG)N1tP(UGG)N1 72 nt13.03□□□□□ -0.32
CWC25P53854 tP(UGG)N2tP(UGG)N2 72 nt13.03□□□□□ -0.32
CWC25P53854 tP(UGG)O1tP(UGG)O1 72 nt13.03□□□□□ -0.32
CWC25P53854 SUF11tP(UGG)O2 72 nt13.03□□□□□ -0.32
CWC25P53854 YOL085CYOL085C 342 nt12.87□□□□□ -0.35
CWC25P53854 PUT4YOR348C 1884 nt12.83□□□□□ -0.36
CWC25P53854 CCC1YLR220W 969 nt12.8□□□□□ -0.36
CWC25P53854 RTC3YHR087W 336 nt12.79□□□□□ -0.36
CWC25P53854 RPP1BYDL130W 321 nt12.75□□□□□ -0.37
CWC25P53854 SSA4YER103W 1929 nt12.66□□□□□ -0.38
CWC25P53854 PKP1YIL042C 1185 nt12.63□□□□□ -0.39
CWC25P53854 SPT5YML010W 3192 nt12.59□□□□□ -0.39
CWC25P53854 RVS167YDR388W 1449 nt12.51□□□□□ -0.41
CWC25P53854 SCJ1YMR214W 1134 nt12.46□□□□□ -0.41
CWC25P53854 PAC11YDR488C 1602 nt12.38□□□□□ -0.43
CWC25P53854 BDF1YLR399C 2061 nt12.32□□□□□ -0.44
CWC25P53854 POA1YBR022W 534 nt12.28□□□□□ -0.44
CWC25P53854 BSC6YOL137W 1494 nt12.26□□□□□ -0.45
CWC25P53854 ARE1YCR048W 1833 nt12.25□□□□□ -0.45
CWC25P53854 tP(UGG)O3tP(UGG)O3 72 nt12.24□□□□□ -0.45
CWC25P53854 NVJ2YPR091C 2313 nt12.2□□□□□ -0.46
CWC25P53854 PET122YER153C 765 nt12.19□□□□□ -0.46
CWC25P53854 TAT1YBR069C 1860 nt12.14□□□□□ -0.47
CWC25P53854 YHR049C-AYHR049C-A 297 nt12.08□□□□□ -0.48
CWC25P53854 SHR5YOL110W 714 nt12.07□□□□□ -0.48
CWC25P53854 SCR1SCR1 522 nt11.96□□□□□ -0.49
CWC25P53854 ATS1YAL020C 1002 nt11.92□□□□□ -0.5
CWC25P53854 YDJ1YNL064C 1230 nt11.87□□□□□ -0.51
CWC25P53854 SAH1YER043C 1350 nt11.85□□□□□ -0.51
CWC25P53854 URN1YPR152C 1398 nt11.85□□□□□ -0.51
CWC25P53854 RRN5YLR141W 1092 nt11.82□□□□□ -0.52
CWC25P53854 OPI9YLR338W 858 nt11.77□□□□□ -0.53
CWC25P53854 DEP1YAL013W 1218 nt11.74□□□□□ -0.53
CWC25P53854 FPS1YLL043W 2010 nt11.74□□□□□ -0.53
CWC25P53854 BUD23YCR047C 828 nt11.67□□□□□ -0.54
CWC25P53854 MEP2YNL142W 1500 nt11.65□□□□□ -0.55
CWC25P53854 YER088W-BYER088W-B 147 nt11.6□□□□□ -0.55
CWC25P53854 RPN10YHR200W 807 nt11.6□□□□□ -0.55
CWC25P53854 YNL208WYNL208W 600 nt11.58□□□□□ -0.56
CWC25P53854 GAR1YHR089C 618 nt11.56□□□□□ -0.56
CWC25P53854 RSB1YOR049C 1065 nt11.45□□□□□ -0.58
CWC25P53854 YBR220CYBR220C 1683 nt11.43□□□□□ -0.58
CWC25P53854 DCW1YKL046C 1350 nt11.4□□□□□ -0.59
CWC25P53854 NAB2YGL122C 1578 nt11.39□□□□□ -0.59
CWC25P53854 PUN1YLR414C 792 nt11.39□□□□□ -0.59
CWC25P53854 YJL225CYJL225C 5277 nt11.39□□□□□ -0.59
CWC25P53854 PTC2YER089C 1395 nt11.35□□□□□ -0.59
CWC25P53854 PCH2YBR186W 1695 nt11.32□□□□□ -0.6
CWC25P53854 GUT2YIL155C 1950 nt11.3□□□□□ -0.6
CWC25P53854 UME6YDR207C 2511 nt11.3□□□□□ -0.6
CWC25P53854 YJR018WYJR018W 363 nt11.29□□□□□ -0.6
CWC25P53854 YMR090WYMR090W 684 nt11.26□□□□□ -0.61
CWC25P53854 EMI2YDR516C 1503 nt11.24□□□□□ -0.61
CWC25P53854 TIR1YER011W 765 nt11.22□□□□□ -0.61
CWC25P53854 SEC11YIR022W 504 nt11.21□□□□□ -0.61
CWC25P53854 SSA1YAL005C 1929 nt11.16□□□□□ -0.62
CWC25P53854 SDH1YKL148C 1923 nt11.15□□□□□ -0.62
CWC25P53854 YJR120WYJR120W 351 nt11.15□□□□□ -0.62
CWC25P53854 FIS1YIL065C 468 nt11.13□□□□□ -0.63
CWC25P53854 YPS1YLR120C 1710 nt11.12□□□□□ -0.63
CWC25P53854 PST2YDR032C 597 nt11.11□□□□□ -0.63
CWC25P53854 PIB2YGL023C 1908 nt11.1□□□□□ -0.63
CWC25P53854 YDL221WYDL221W 552 nt11.07□□□□□ -0.64
CWC25P53854 DAL1YIR027C 1383 nt11.03□□□□□ -0.64
CWC25P53854 YHR165W-AYHR165W-A 312 nt11.01□□□□□ -0.65
CWC25P53854 BOR1YNL275W 1731 nt11□□□□□ -0.65
CWC25P53854 RPP2BYDR382W 333 nt10.97□□□□□ -0.65
CWC25P53854 SRB2YHR041C 633 nt10.95□□□□□ -0.66
CWC25P53854 INM2YDR287W 879 nt10.94□□□□□ -0.66
CWC25P53854 RDN37-1RDN37-1 5354 nt10.93□□□□□ -0.66
CWC25P53854 RDN37-2RDN37-2 5354 nt10.93□□□□□ -0.66
CWC25P53854 PHO4YFR034C 939 nt10.92□□□□□ -0.66
CWC25P53854 RTF1YGL244W 1677 nt10.91□□□□□ -0.66
CWC25P53854 SCC4YER147C 1875 nt10.9□□□□□ -0.66
CWC25P53854 FPR4YLR449W 1179 nt10.89□□□□□ -0.67
CWC25P53854 YDR095CYDR095C 411 nt10.88□□□□□ -0.67
CWC25P53854 CAC2YML102W 1407 nt10.82□□□□□ -0.68
CWC25P53854 MCH5YOR306C 1566 nt10.82□□□□□ -0.68
CWC25P53854 YSC84YHR016C 1407 nt10.77□□□□□ -0.68
CWC25P53854 BDH2YAL061W 1254 nt10.77□□□□□ -0.69
CWC25P53854 YBL100CYBL100C 315 nt10.77□□□□□ -0.69
CWC25P53854 PTK1YKL198C 1989 nt10.76□□□□□ -0.69
Retrieved 100 of 7,029 protein–RNA pairs in 14.2 ms