RNA–Protein interactions for RNA: YLR228C

ECM22, Transcript of Sterol regulatory element binding protein, yeastyeast

Gene ECM22, Length 2,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ECM22YLR228C FAP1P53971 965 aa8.22□□□□□ -1.09
ECM22YLR228C MTC1P47018 478 aaKnown RBP8.01□□□□□ -1.13
ECM22YLR228C PRY3P47033 881 aa7.75□□□□□ -1.17
ECM22YLR228C MON2P48563 1636 aaPredicted RBP7.6□□□□□ -1.19
ECM22YLR228C AAD16Q02895 342 aa7.33□□□□□ -1.24
ECM22YLR228C INO80P53115 1489 aa7.28□□□□□ -1.24
ECM22YLR228C HAA1Q12753 694 aaKnown RBP7.25□□□□□ -1.25
ECM22YLR228C PRI1P10363 409 aa7.24□□□□□ -1.25
ECM22YLR228C YCK3P39962 524 aa7.22□□□□□ -1.25
ECM22YLR228C RSE1Q04693 1361 aaKnown RBP7.1□□□□□ -1.27
ECM22YLR228C KOG1P38873 1557 aa6.99□□□□□ -1.29
ECM22YLR228C DRS1P32892 752 aaKnown RBP6.96□□□□□ -1.3
ECM22YLR228C DNA2P38859 1522 aa6.93□□□□□ -1.3
ECM22YLR228C SPA2P23201 1466 aaKnown RBP6.9□□□□□ -1.31
ECM22YLR228C ISW2Q08773 1120 aa6.86□□□□□ -1.31
ECM22YLR228C MIF2P35201 549 aa6.81□□□□□ -1.32
ECM22YLR228C TSR3Q12094 313 aaKnown RBP6.79□□□□□ -1.32
ECM22YLR228C RPG1P38249 964 aaKnown RBP6.79□□□□□ -1.32
ECM22YLR228C SWR1Q05471 1514 aa6.65□□□□□ -1.34
ECM22YLR228C MRPL32P25348 183 aa6.57□□□□□ -1.36
ECM22YLR228C YGL015CP33199 130 aa6.56□□□□□ -1.36
ECM22YLR228C BUD31P25337 157 aaPredicted RBP6.37□□□□□ -1.39
ECM22YLR228C TY1B-DR4Q07793 1604 aa6.3□□□□□ -1.4
ECM22YLR228C YFR006WP43590 535 aa6.27□□□□□ -1.41
ECM22YLR228C TCB3Q03640 1545 aaKnown RBP6.26□□□□□ -1.41
ECM22YLR228C REV3P14284 1504 aa6.18□□□□□ -1.42
ECM22YLR228C BFR2Q06631 534 aaKnown RBP6.15□□□□□ -1.42
ECM22YLR228C DIP2Q12220 943 aaPredicted RBP6.1□□□□□ -1.43
ECM22YLR228C THO2P53552 1597 aaKnown RBP6.1□□□□□ -1.43
ECM22YLR228C REB1P21538 810 aa6.09□□□□□ -1.43
ECM22YLR228C DNF1P32660 1571 aa6.05□□□□□ -1.44
ECM22YLR228C MYO2P19524 1574 aaKnown RBP6.03□□□□□ -1.44
ECM22YLR228C CDC27P38042 758 aa6.03□□□□□ -1.44
ECM22YLR228C UBP10P53874 792 aaPredicted RBP6.02□□□□□ -1.45
ECM22YLR228C RPL17AP05740 184 aaKnown RBP6.01□□□□□ -1.45
ECM22YLR228C RPL17BP46990 184 aaKnown RBP6.01□□□□□ -1.45
ECM22YLR228C SIS1P25294 352 aaKnown RBP6.01□□□□□ -1.45
ECM22YLR228C PEP1P32319 1579 aa6.01□□□□□ -1.45
ECM22YLR228C RQC2Q12532 1038 aaKnown RBP5.99□□□□□ -1.45
ECM22YLR228C LTE1P07866 1435 aa5.97□□□□□ -1.45
ECM22YLR228C MDS3P53094 1487 aa5.96□□□□□ -1.45
ECM22YLR228C MAP2P38174 421 aaKnown RBP5.96□□□□□ -1.46
ECM22YLR228C IRC20Q06554 1556 aa5.95□□□□□ -1.46
ECM22YLR228C UBP9P39967 754 aa5.9□□□□□ -1.47
ECM22YLR228C NOP2P40991 618 aaKnown RBP5.89□□□□□ -1.47
ECM22YLR228C MET5P47169 1442 aa5.89□□□□□ -1.47
ECM22YLR228C BUD4P47136 1447 aa5.88□□□□□ -1.47
ECM22YLR228C SSK2P53599 1579 aa5.87□□□□□ -1.47
ECM22YLR228C BPT1P14772 1559 aa5.84□□□□□ -1.47
ECM22YLR228C TFA1P36100 482 aa5.84□□□□□ -1.47
ECM22YLR228C BNI1P41832 1953 aa5.84□□□□□ -1.47
ECM22YLR228C ECM5Q03214 1411 aa5.83□□□□□ -1.48
ECM22YLR228C ESC1Q03661 1658 aaKnown RBP5.82□□□□□ -1.48
ECM22YLR228C AVT3P36062 692 aa5.82□□□□□ -1.48
ECM22YLR228C YKR023WP36119 530 aaKnown RBP5.8□□□□□ -1.48
ECM22YLR228C TIF4632P39936 914 aaKnown RBP5.8□□□□□ -1.48
ECM22YLR228C TGL3P40308 642 aa5.78□□□□□ -1.48
ECM22YLR228C RPA190P10964 1664 aaKnown RBP5.77□□□□□ -1.49
ECM22YLR228C YCF1P39109 1515 aaKnown RBP5.77□□□□□ -1.49
ECM22YLR228C HIR3P47171 1648 aa5.75□□□□□ -1.49
ECM22YLR228C CDC25P04821 1589 aa5.74□□□□□ -1.49
ECM22YLR228C NSR1P27476 414 aaKnown RBP RIP-Chip data5.72□□□□□ -1.49not detected
ECM22YLR228C GEA2P39993 1459 aaKnown RBP5.7□□□□□ -1.5
ECM22YLR228C TFC8Q12308 588 aa5.7□□□□□ -1.5
ECM22YLR228C YOR093CQ12275 1648 aa5.7□□□□□ -1.5
ECM22YLR228C ABP1P15891 592 aaKnown RBP5.69□□□□□ -1.5
ECM22YLR228C HOP09932 586 aa5.69□□□□□ -1.5
ECM22YLR228C SLX5P32828 619 aaKnown RBP5.69□□□□□ -1.5
ECM22YLR228C SCY1P53009 804 aa5.69□□□□□ -1.5
ECM22YLR228C HSL1P34244 1518 aa5.68□□□□□ -1.5
ECM22YLR228C DCD1P06773 312 aa5.67□□□□□ -1.5
ECM22YLR228C CAB3P36076 571 aa5.67□□□□□ -1.5
ECM22YLR228C SPT6P23615 1451 aaKnown RBP5.67□□□□□ -1.5
ECM22YLR228C SPT21P35209 758 aa5.66□□□□□ -1.5
ECM22YLR228C RPO31P04051 1460 aa5.65□□□□□ -1.5
ECM22YLR228C EBP2P36049 427 aaKnown RBP5.64□□□□□ -1.51
ECM22YLR228C SGS1P35187 1447 aa5.61□□□□□ -1.51
ECM22YLR228C MMS1Q06211 1407 aa5.59□□□□□ -1.51
ECM22YLR228C DNF2Q12675 1612 aa5.56□□□□□ -1.52
ECM22YLR228C RKR1Q04781 1562 aa5.53□□□□□ -1.52
ECM22YLR228C SKI3P17883 1432 aaKnown RBP5.52□□□□□ -1.53
ECM22YLR228C SSN2P38931 1420 aa5.51□□□□□ -1.53
ECM22YLR228C ATG2P53855 1592 aa5.49□□□□□ -1.53
ECM22YLR228C NTE1Q04958 1679 aa5.49□□□□□ -1.53
ECM22YLR228C YPR148CQ06523 435 aa5.48□□□□□ -1.53
ECM22YLR228C BCH2P36122 765 aa5.47□□□□□ -1.53
ECM22YLR228C SIS2P36024 562 aa5.45□□□□□ -1.54
ECM22YLR228C YBL029C-AQ3E756 94 aa5.45□□□□□ -1.54
ECM22YLR228C PDR15Q04182 1529 aaKnown RBP5.44□□□□□ -1.54
ECM22YLR228C TAF2P23255 1407 aa5.43□□□□□ -1.54
ECM22YLR228C URN1Q06525 465 aaKnown RBP5.43□□□□□ -1.54
ECM22YLR228C MST1P07236 462 aa5.42□□□□□ -1.54
ECM22YLR228C DRS2P39524 1355 aa5.41□□□□□ -1.54
ECM22YLR228C ITT1Q04638 464 aa5.41□□□□□ -1.54
ECM22YLR228C VNX1P42839 908 aa5.37□□□□□ -1.55
ECM22YLR228C YOR238WQ08634 303 aa5.37□□□□□ -1.55
ECM22YLR228C ENP1P38333 483 aaKnown RBP5.36□□□□□ -1.55
ECM22YLR228C YJL171CP46992 396 aa5.35□□□□□ -1.55
ECM22YLR228C SPP1Q03012 353 aa5.33□□□□□ -1.56
ECM22YLR228C TAF7Q05021 590 aa5.31□□□□□ -1.56
Retrieved 100 of 5,963 RNA–protein pairs in 34.3 ms