RNA–Protein interactions for RNA: YGR048W

UFD1, Transcript of Substrate-recruiting cofactor of the Cdc48p-Npl4p-Ufd1p segregase, yeastyeast

Gene UFD1, Length 1,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UFD1YGR048W STE6P12866 1290 aa8.46□□□□□ -1.06
UFD1YGR048W SEN2P16658 377 aa8.46□□□□□ -1.06
UFD1YGR048W SRV2P17555 526 aaKnown RBP8.46□□□□□ -1.06
UFD1YGR048W SPS22P25380 463 aa8.46□□□□□ -1.06
UFD1YGR048W MSH2P25847 964 aa8.46□□□□□ -1.06
UFD1YGR048W URA1P28272 314 aaPredicted RBP8.46□□□□□ -1.06
UFD1YGR048W YBL055CP34220 418 aaPredicted RBP8.46□□□□□ -1.06
UFD1YGR048W YKL222CP35995 705 aa8.46□□□□□ -1.06
UFD1YGR048W YHR020WP38708 688 aaKnown RBP8.46□□□□□ -1.06
UFD1YGR048W RTS1P38903 757 aa8.46□□□□□ -1.06
UFD1YGR048W PIK1P39104 1066 aa8.46□□□□□ -1.06
UFD1YGR048W ALG5P40350 334 aa8.46□□□□□ -1.06
UFD1YGR048W YNL040WP53960 456 aaPredicted RBP8.46□□□□□ -1.06
UFD1YGR048W ALO1P54783 526 aaKnown RBP8.46□□□□□ -1.06
UFD1YGR048W YMR114CQ04471 368 aaKnown RBP8.46□□□□□ -1.06
UFD1YGR048W UIP4Q08926 304 aa8.46□□□□□ -1.06
UFD1YGR048W BUG1Q12191 341 aa8.46□□□□□ -1.06
UFD1YGR048W RUP1Q12242 671 aa8.46□□□□□ -1.06
UFD1YGR048W NMT1P14743 455 aa8.45□□□□□ -1.06
UFD1YGR048W VAC17P25591 423 aa8.45□□□□□ -1.06
UFD1YGR048W PPH3P32345 308 aa8.45□□□□□ -1.06
UFD1YGR048W SMY2P32909 740 aaKnown RBP8.45□□□□□ -1.06
UFD1YGR048W AST1P35183 429 aa8.45□□□□□ -1.06
UFD1YGR048W IFA38P38286 347 aa8.45□□□□□ -1.06
UFD1YGR048W MIP6P38760 659 aaKnown RBP8.45□□□□□ -1.06
UFD1YGR048W VFA1P40080 203 aa8.45□□□□□ -1.06
UFD1YGR048W FMP33P46998 180 aa8.45□□□□□ -1.06
UFD1YGR048W URB2P47108 1174 aa8.45□□□□□ -1.06
UFD1YGR048W TMA20P89886 181 aaPredicted RBP8.45□□□□□ -1.06
UFD1YGR048W RPT6Q01939 405 aaKnown RBP8.45□□□□□ -1.06
UFD1YGR048W SRL4Q03085 281 aa8.45□□□□□ -1.06
UFD1YGR048W HMO1Q03973 246 aaKnown RBP8.45□□□□□ -1.06
UFD1YGR048W SSQ1Q05931 657 aaPredicted RBP8.45□□□□□ -1.06
UFD1YGR048W VIP1Q06685 1146 aaKnown RBP8.45□□□□□ -1.06
UFD1YGR048W RIX7Q07844 837 aaKnown RBP8.45□□□□□ -1.06
UFD1YGR048W YOL057WQ08225 711 aa8.45□□□□□ -1.06
UFD1YGR048W FAP7Q12055 197 aaPredicted RBP8.45□□□□□ -1.06
UFD1YGR048W YLR125WQ12138 136 aa8.45□□□□□ -1.06
UFD1YGR048W LSO2Q3E772 92 aaKnown RBP8.45□□□□□ -1.06
UFD1YGR048W YRF1-1P0CX20 1796 aa8.45□□□□□ -1.06
UFD1YGR048W YRF1-5P0CX21 1796 aa8.45□□□□□ -1.06
UFD1YGR048W YRF1-8P0CX22 1796 aa8.45□□□□□ -1.06
UFD1YGR048W PGK1P00560 416 aaKnown RBP8.44□□□□□ -1.06
UFD1YGR048W RPL24AP04449 155 aaKnown RBP8.44□□□□□ -1.06
UFD1YGR048W CMD1P06787 147 aaKnown RBP8.44□□□□□ -1.06
UFD1YGR048W GFA1P14742 717 aaKnown RBP8.44□□□□□ -1.06
UFD1YGR048W GSY1P23337 708 aa8.44□□□□□ -1.06
UFD1YGR048W MRPL25P23369 157 aa8.44□□□□□ -1.06
UFD1YGR048W HXT6P39003 570 aaKnown RBP8.44□□□□□ -1.06
UFD1YGR048W HXT7P39004 570 aa8.44□□□□□ -1.06
UFD1YGR048W SMX2P40204 77 aaKnown RBP8.44□□□□□ -1.06
UFD1YGR048W MKT1P40850 830 aaKnown RBP8.44□□□□□ -1.06
UFD1YGR048W YNL320WP42840 284 aa8.44□□□□□ -1.06
UFD1YGR048W GCD14P46959 383 aaPredicted RBP8.44□□□□□ -1.06
UFD1YGR048W ALB1P47019 175 aaPredicted RBP8.44□□□□□ -1.06
UFD1YGR048W UME1Q03010 460 aa8.44□□□□□ -1.06
UFD1YGR048W TFB3Q03290 321 aa8.44□□□□□ -1.06
UFD1YGR048W CEF1Q03654 590 aaPredicted RBP8.44□□□□□ -1.06
UFD1YGR048W SYF1Q04048 859 aaPredicted RBP8.44□□□□□ -1.06
UFD1YGR048W SEC10Q06245 871 aa8.44□□□□□ -1.06
UFD1YGR048W RTT10Q08924 1013 aa8.44□□□□□ -1.06
UFD1YGR048W ATP16Q12165 160 aa8.44□□□□□ -1.06
UFD1YGR048W YOR111WQ99210 232 aa8.44□□□□□ -1.06
UFD1YGR048W RAD4P14736 754 aa8.43□□□□□ -1.06
UFD1YGR048W VMA2P16140 517 aaKnown RBP8.43□□□□□ -1.06
UFD1YGR048W TSR4P25040 408 aa8.43□□□□□ -1.06
UFD1YGR048W BMH1P29311 267 aaKnown RBP8.43□□□□□ -1.06
UFD1YGR048W BCD1P38772 366 aa8.43□□□□□ -1.06
UFD1YGR048W SSF1P38789 453 aaPredicted RBP8.43□□□□□ -1.06
UFD1YGR048W CAB2P40506 365 aa8.43□□□□□ -1.06
UFD1YGR048W GCV2P49095 1034 aa8.43□□□□□ -1.06
UFD1YGR048W YGR237CP50089 785 aa8.43□□□□□ -1.06
UFD1YGR048W HOS2P53096 452 aaPredicted RBP8.43□□□□□ -1.06
UFD1YGR048W LGE1Q02796 332 aaKnown RBP8.43□□□□□ -1.06
UFD1YGR048W PKH1Q03407 766 aa8.43□□□□□ -1.06
UFD1YGR048W ATG13Q06628 738 aa8.43□□□□□ -1.06
UFD1YGR048W YDR306CQ06640 478 aa8.43□□□□□ -1.06
UFD1YGR048W FRA1Q07825 749 aa8.43□□□□□ -1.06
UFD1YGR048W DAS2Q12084 232 aa8.43□□□□□ -1.06
UFD1YGR048W CDC31P06704 161 aaKnown RBP8.42□□□□□ -1.06
UFD1YGR048W PPR1P07272 904 aaPredicted RBP8.42□□□□□ -1.06
UFD1YGR048W YAK1P14680 807 aa8.42□□□□□ -1.06
UFD1YGR048W CBP3P21560 335 aa8.42□□□□□ -1.06
UFD1YGR048W PDC6P26263 563 aaKnown RBP8.42□□□□□ -1.06
UFD1YGR048W PEP3P27801 918 aa8.42□□□□□ -1.06
UFD1YGR048W MLS1P30952 554 aa8.42□□□□□ -1.06
UFD1YGR048W KTR3P38130 404 aaPredicted RBP8.42□□□□□ -1.06
UFD1YGR048W SNL1P40548 159 aa8.42□□□□□ -1.06
UFD1YGR048W HAM1P47119 197 aaKnown RBP8.42□□□□□ -1.06
UFD1YGR048W KAP114P53067 1004 aa8.42□□□□□ -1.06
UFD1YGR048W APP1P53933 587 aa8.42□□□□□ -1.06
UFD1YGR048W EBS1Q03466 884 aaKnown RBP8.42□□□□□ -1.06
UFD1YGR048W ECI1Q05871 280 aa8.42□□□□□ -1.06
UFD1YGR048W YLR257WQ06146 321 aaKnown RBP8.42□□□□□ -1.06
UFD1YGR048W SYO1Q07395 620 aa8.42□□□□□ -1.06
UFD1YGR048W GAS4Q08271 471 aa8.42□□□□□ -1.06
UFD1YGR048W RPN8Q08723 338 aaKnown RBP8.42□□□□□ -1.06
UFD1YGR048W NOT5Q12514 560 aaPredicted RBP8.42□□□□□ -1.06
UFD1YGR048W YBL113CQ7M4S9 792 aa8.42□□□□□ -1.06
UFD1YGR048W SEY1Q99287 776 aa8.42□□□□□ -1.06
Retrieved 100 of 5,963 RNA–protein pairs in 47.8 ms