Protein–RNA interactions for Protein: P38903

RTS1, Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit delta isoform, yeastyeast

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RTS1P38903 YML009W-BYML009W-B 477 nt23.99■■□□□ 1.43
RTS1P38903 NSR1YGR159C 1245 nt23.65■■□□□ 1.38
RTS1P38903 NOP1YDL014W 984 nt23.36■■□□□ 1.33
RTS1P38903 YKL036CYKL036C 393 nt21.72■■□□□ 1.07
RTS1P38903 MDJ1YFL016C 1536 nt20.88■□□□□ 0.93
RTS1P38903 Q0297Q0297 156 nt20.49■□□□□ 0.87
RTS1P38903 SRX1YKL086W 384 nt20.41■□□□□ 0.86
RTS1P38903 YJL027CYJL027C 417 nt20.33■□□□□ 0.85
RTS1P38903 SCS3YGL126W 1143 nt19.85■□□□□ 0.77
RTS1P38903 YCR051WYCR051W 669 nt19.42■□□□□ 0.7
RTS1P38903 YOL085CYOL085C 342 nt18.82■□□□□ 0.6
RTS1P38903 PKP1YIL042C 1185 nt18.55■□□□□ 0.56
RTS1P38903 DBP2YNL112W 1641 nt18.51■□□□□ 0.55
RTS1P38903 RPP1BYDL130W 321 nt18.4■□□□□ 0.54
RTS1P38903 TRN1tP(UGG)A 72 nt18.34■□□□□ 0.53
RTS1P38903 SUF9tP(UGG)F 72 nt18.34■□□□□ 0.53
RTS1P38903 SUF8tP(UGG)H 72 nt18.34■□□□□ 0.53
RTS1P38903 tP(UGG)LtP(UGG)L 72 nt18.34■□□□□ 0.53
RTS1P38903 SUF7tP(UGG)M 72 nt18.34■□□□□ 0.53
RTS1P38903 tP(UGG)N1tP(UGG)N1 72 nt18.34■□□□□ 0.53
RTS1P38903 tP(UGG)N2tP(UGG)N2 72 nt18.34■□□□□ 0.53
RTS1P38903 tP(UGG)O1tP(UGG)O1 72 nt18.34■□□□□ 0.53
RTS1P38903 SUF11tP(UGG)O2 72 nt18.34■□□□□ 0.53
RTS1P38903 CCC1YLR220W 969 nt18.23■□□□□ 0.51
RTS1P38903 ATS1YAL020C 1002 nt17.81■□□□□ 0.44
RTS1P38903 SCJ1YMR214W 1134 nt17.75■□□□□ 0.43
RTS1P38903 YBR190WYBR190W 312 nt17.72■□□□□ 0.43
RTS1P38903 PET122YER153C 765 nt17.57■□□□□ 0.4
RTS1P38903 RVS167YDR388W 1449 nt17.47■□□□□ 0.39
RTS1P38903 tP(UGG)O3tP(UGG)O3 72 nt17.43■□□□□ 0.38
RTS1P38903 SCR1SCR1 522 nt17.43■□□□□ 0.38
RTS1P38903 RTC3YHR087W 336 nt17.4■□□□□ 0.38
RTS1P38903 RRN5YLR141W 1092 nt17.1■□□□□ 0.33
RTS1P38903 SHR5YOL110W 714 nt16.88■□□□□ 0.29
RTS1P38903 YDJ1YNL064C 1230 nt16.84■□□□□ 0.29
RTS1P38903 RSB1YOR049C 1065 nt16.81■□□□□ 0.28
RTS1P38903 YER088W-BYER088W-B 147 nt16.75■□□□□ 0.27
RTS1P38903 GAR1YHR089C 618 nt16.49■□□□□ 0.23
RTS1P38903 PST2YDR032C 597 nt16.46■□□□□ 0.23
RTS1P38903 DEP1YAL013W 1218 nt16.4■□□□□ 0.22
RTS1P38903 URN1YPR152C 1398 nt16.32■□□□□ 0.2
RTS1P38903 RPN10YHR200W 807 nt16.11■□□□□ 0.17
RTS1P38903 YNL208WYNL208W 600 nt16.11■□□□□ 0.17
RTS1P38903 OPI9YLR338W 858 nt16.03■□□□□ 0.16
RTS1P38903 PUT4YOR348C 1884 nt15.95■□□□□ 0.14
RTS1P38903 SAH1YER043C 1350 nt15.91■□□□□ 0.14
RTS1P38903 TIR1YER011W 765 nt15.91■□□□□ 0.14
RTS1P38903 YKL097CYKL097C 411 nt15.91■□□□□ 0.14
RTS1P38903 SHU1YHL006C 453 nt15.76■□□□□ 0.11
RTS1P38903 ARE1YCR048W 1833 nt15.73■□□□□ 0.11
RTS1P38903 SSA1YAL005C 1929 nt15.68■□□□□ 0.1
RTS1P38903 YJR018WYJR018W 363 nt15.58■□□□□ 0.08
RTS1P38903 PUN1YLR414C 792 nt15.57■□□□□ 0.08
RTS1P38903 YHR049C-AYHR049C-A 297 nt15.54■□□□□ 0.08
RTS1P38903 YAL037C-BYAL037C-B 975 nt15.51■□□□□ 0.07
RTS1P38903 POA1YBR022W 534 nt15.51■□□□□ 0.07
RTS1P38903 SRB2YHR041C 633 nt15.46■□□□□ 0.07
RTS1P38903 PTC2YER089C 1395 nt15.37■□□□□ 0.05
RTS1P38903 YJR120WYJR120W 351 nt15.35■□□□□ 0.05
RTS1P38903 RPP2BYDR382W 333 nt15.32■□□□□ 0.04
RTS1P38903 WWM1YFL010C 636 nt15.25■□□□□ 0.03
RTS1P38903 SSA3YBL075C 1950 nt15.24■□□□□ 0.03
RTS1P38903 BUD23YCR047C 828 nt15.24■□□□□ 0.03
RTS1P38903 YOR139CYOR139C 393 nt15.24■□□□□ 0.03
RTS1P38903 YGR021WYGR021W 873 nt15.18■□□□□ 0.02
RTS1P38903 HOM6YJR139C 1080 nt15.14■□□□□ 0.01
RTS1P38903 NAB2YGL122C 1578 nt15.12■□□□□ 0.01
RTS1P38903 MNP1YGL068W 585 nt15.12■□□□□ 0.01
RTS1P38903 BSC6YOL137W 1494 nt15.12■□□□□ 0.01
RTS1P38903 NPL3YDR432W 1245 nt15.09■□□□□ 0.01
RTS1P38903 BDH2YAL061W 1254 nt15.02■□□□□ -0
RTS1P38903 INM2YDR287W 879 nt14.99□□□□□ -0.01
RTS1P38903 FPR4YLR449W 1179 nt14.99□□□□□ -0.01
RTS1P38903 YFL021C-AYFL021C-A 855 nt14.97□□□□□ -0.01
RTS1P38903 DAL1YIR027C 1383 nt14.97□□□□□ -0.01
RTS1P38903 RKM5YLR137W 1104 nt14.92□□□□□ -0.02
RTS1P38903 FIS1YIL065C 468 nt14.91□□□□□ -0.02
RTS1P38903 YOL037CYOL037C 354 nt14.9□□□□□ -0.02
RTS1P38903 YBL100CYBL100C 315 nt14.89□□□□□ -0.03
RTS1P38903 LSM3YLR438C-A 270 nt14.85□□□□□ -0.03
RTS1P38903 PHO4YFR034C 939 nt14.82□□□□□ -0.04
RTS1P38903 TRM9YML014W 840 nt14.74□□□□□ -0.05
RTS1P38903 FUN26YAL022C 1554 nt14.72□□□□□ -0.05
RTS1P38903 tM(CAU)CtM(CAU)C 72 nt14.64□□□□□ -0.07
RTS1P38903 IMT4tM(CAU)E 72 nt14.64□□□□□ -0.07
RTS1P38903 IMT3tM(CAU)J3 72 nt14.64□□□□□ -0.07
RTS1P38903 IMT1tM(CAU)O1 72 nt14.64□□□□□ -0.07
RTS1P38903 IMT2tM(CAU)P 72 nt14.64□□□□□ -0.07
RTS1P38903 YLR281CYLR281C 468 nt14.55□□□□□ -0.08
RTS1P38903 CCT6YDR188W 1641 nt14.54□□□□□ -0.08
RTS1P38903 PUS2YGL063W 1113 nt14.51□□□□□ -0.09
RTS1P38903 WHI5YOR083W 888 nt14.51□□□□□ -0.09
RTS1P38903 ALF1YNL148C 765 nt14.49□□□□□ -0.09
RTS1P38903 YPS1YLR120C 1710 nt14.45□□□□□ -0.1
RTS1P38903 SUF2tP(AGG)C 72 nt14.42□□□□□ -0.1
RTS1P38903 SUF10tP(AGG)N 72 nt14.42□□□□□ -0.1
RTS1P38903 YDR095CYDR095C 411 nt14.39□□□□□ -0.11
RTS1P38903 YLR154C-GYLR154C-G 150 nt14.35□□□□□ -0.11
RTS1P38903 YHR165W-AYHR165W-A 312 nt14.32□□□□□ -0.12
RTS1P38903 SIS1YNL007C 1059 nt14.23□□□□□ -0.13
Retrieved 100 of 7,029 protein–RNA pairs in 13.9 ms