RNA–Protein interactions for RNA: YBR012W-B

YBR012W-B, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YBR012W-B, Length 5,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YBR012W-BYBR012W-B YAP1801P38856 637 aa2.78□□□□□ -1.96
YBR012W-BYBR012W-B SEC9P40357 651 aa2.78□□□□□ -1.96
YBR012W-BYBR012W-B ALR2P43553 858 aa2.78□□□□□ -1.96
YBR012W-BYBR012W-B PRP24P49960 444 aaKnown RBP2.78□□□□□ -1.96
YBR012W-BYBR012W-B HOS3Q02959 697 aaKnown RBP2.78□□□□□ -1.96
YBR012W-BYBR012W-B SRL4Q03085 281 aa2.78□□□□□ -1.96
YBR012W-BYBR012W-B YPQ2Q06328 317 aa2.78□□□□□ -1.96
YBR012W-BYBR012W-B SLK19Q08581 821 aaKnown RBP2.78□□□□□ -1.96
YBR012W-BYBR012W-B YLL054CQ12244 843 aa2.78□□□□□ -1.96
YBR012W-BYBR012W-B MET2P08465 486 aa2.78□□□□□ -1.96
YBR012W-BYBR012W-B SRD1P09007 221 aa2.78□□□□□ -1.96
YBR012W-BYBR012W-B MAS2P11914 482 aa2.78□□□□□ -1.96
YBR012W-BYBR012W-B MSS51P32335 436 aa2.78□□□□□ -1.96
YBR012W-BYBR012W-B SSH4P32343 579 aa2.78□□□□□ -1.96
YBR012W-BYBR012W-B MED6P38782 295 aa2.78□□□□□ -1.96
YBR012W-BYBR012W-B LSB6P42951 607 aa2.78□□□□□ -1.96
YBR012W-BYBR012W-B GOR1P53839 350 aa2.78□□□□□ -1.96
YBR012W-BYBR012W-B MZM1Q03429 123 aaPredicted RBP2.78□□□□□ -1.96
YBR012W-BYBR012W-B TSA2Q04120 196 aa2.78□□□□□ -1.96
YBR012W-BYBR012W-B MCM16Q12262 181 aa2.78□□□□□ -1.96
YBR012W-BYBR012W-B TRM11Q12463 433 aa2.78□□□□□ -1.96
YBR012W-BYBR012W-B NHA1Q99271 985 aa2.78□□□□□ -1.96
YBR012W-BYBR012W-B PEP1P32319 1579 aa2.78□□□□□ -1.96
YBR012W-BYBR012W-B AEP2P22136 580 aa2.78□□□□□ -1.96
YBR012W-BYBR012W-B PRP22P24384 1145 aaKnown RBP2.78□□□□□ -1.96
YBR012W-BYBR012W-B SPS22P25380 463 aa2.78□□□□□ -1.96
YBR012W-BYBR012W-B SKI2P35207 1287 aaKnown RBP RIP-Chip data2.78□□□□□ -1.96not detected
YBR012W-BYBR012W-B ATG12P38316 186 aa2.78□□□□□ -1.96
YBR012W-BYBR012W-B MSS4P38994 779 aa2.78□□□□□ -1.96
YBR012W-BYBR012W-B TPA1P40032 644 aaKnown RBP2.78□□□□□ -1.96
YBR012W-BYBR012W-B RGI2P40188 164 aa2.78□□□□□ -1.96
YBR012W-BYBR012W-B IRC6P43615 237 aa2.78□□□□□ -1.96
YBR012W-BYBR012W-B YGL108CP53139 140 aa2.78□□□□□ -1.96
YBR012W-BYBR012W-B RPT6Q01939 405 aaKnown RBP2.78□□□□□ -1.96
YBR012W-BYBR012W-B RPM2Q02773 1202 aa2.78□□□□□ -1.96
YBR012W-BYBR012W-B RLI1Q03195 608 aaKnown RBP2.78□□□□□ -1.96
YBR012W-BYBR012W-B INM2Q05533 292 aa2.78□□□□□ -1.96
YBR012W-BYBR012W-B TAZ1Q06510 381 aa2.78□□□□□ -1.96
YBR012W-BYBR012W-B ZIP1P31111 875 aa2.78□□□□□ -1.96
YBR012W-BYBR012W-B TIF4631P39935 952 aaKnown RBP2.78□□□□□ -1.96
YBR012W-BYBR012W-B YGL138CP53122 345 aa2.78□□□□□ -1.96
YBR012W-BYBR012W-B ULP1Q02724 621 aa2.78□□□□□ -1.96
YBR012W-BYBR012W-B WAR1Q03631 944 aa2.78□□□□□ -1.96
YBR012W-BYBR012W-B SHS1Q07657 551 aa2.78□□□□□ -1.96
YBR012W-BYBR012W-B GAS5Q08193 484 aa2.78□□□□□ -1.96
YBR012W-BYBR012W-B LEU9Q12166 604 aaKnown RBP2.78□□□□□ -1.96
YBR012W-BYBR012W-B PDR5P33302 1511 aaKnown RBP2.78□□□□□ -1.96
YBR012W-BYBR012W-B COX13P32799 129 aa2.77□□□□□ -1.97
YBR012W-BYBR012W-B LRP1P38801 184 aaKnown RBP2.77□□□□□ -1.97
YBR012W-BYBR012W-B SPF1P39986 1215 aaKnown RBP2.77□□□□□ -1.97
YBR012W-BYBR012W-B SBE2P42223 864 aaKnown RBP2.77□□□□□ -1.97
YBR012W-BYBR012W-B ROK1P45818 564 aaPredicted RBP2.77□□□□□ -1.97
YBR012W-BYBR012W-B SSY5P47002 699 aa2.77□□□□□ -1.97
YBR012W-BYBR012W-B APS3P47064 194 aa2.77□□□□□ -1.97
YBR012W-BYBR012W-B BET4Q00618 327 aa2.77□□□□□ -1.97
YBR012W-BYBR012W-B SND1Q04007 877 aa2.77□□□□□ -1.97
YBR012W-BYBR012W-B POB3Q04636 552 aaKnown RBP2.77□□□□□ -1.97
YBR012W-BYBR012W-B GTT2Q12390 233 aa2.77□□□□□ -1.97
YBR012W-BYBR012W-B PNO1Q99216 274 aaKnown RBP2.77□□□□□ -1.97
YBR012W-BYBR012W-B MLP2P40457 1679 aa2.77□□□□□ -1.97
YBR012W-BYBR012W-B YMR084WA2P2R3 262 aa2.77□□□□□ -1.97
YBR012W-BYBR012W-B HIS1P00498 297 aaKnown RBP2.77□□□□□ -1.97
YBR012W-BYBR012W-B RPS8AP0CX39 200 aaKnown RBP2.77□□□□□ -1.97
YBR012W-BYBR012W-B RPS8BP0CX40 200 aaKnown RBP2.77□□□□□ -1.97
YBR012W-BYBR012W-B PHO8P11491 566 aa2.77□□□□□ -1.97
YBR012W-BYBR012W-B MSH2P25847 964 aa2.77□□□□□ -1.97
YBR012W-BYBR012W-B YKT6P36015 200 aaKnown RBP2.77□□□□□ -1.97
YBR012W-BYBR012W-B BYE1P36106 594 aa2.77□□□□□ -1.97
YBR012W-BYBR012W-B MMS4P38257 691 aa2.77□□□□□ -1.97
YBR012W-BYBR012W-B NDC80P40460 691 aa2.77□□□□□ -1.97
YBR012W-BYBR012W-B LYS5P50113 272 aa2.77□□□□□ -1.97
YBR012W-BYBR012W-B YNR021WP53723 404 aaKnown RBP2.77□□□□□ -1.97
YBR012W-BYBR012W-B VPS30Q02948 557 aa2.77□□□□□ -1.97
YBR012W-BYBR012W-B RVB1Q03940 463 aaKnown RBP2.77□□□□□ -1.97
YBR012W-BYBR012W-B KRE28Q04431 385 aa2.77□□□□□ -1.97
YBR012W-BYBR012W-B DIT2P21595 489 aa2.77□□□□□ -1.97
YBR012W-BYBR012W-B NFU1P32860 256 aa2.77□□□□□ -1.97
YBR012W-BYBR012W-B LIP5P32875 414 aa2.77□□□□□ -1.97
YBR012W-BYBR012W-B PTH2P34222 208 aa2.77□□□□□ -1.97
YBR012W-BYBR012W-B TVP38P36164 337 aa2.77□□□□□ -1.97
YBR012W-BYBR012W-B JNM1P36224 373 aa2.77□□□□□ -1.97
YBR012W-BYBR012W-B SIP5P40210 489 aaKnown RBP2.77□□□□□ -1.97
YBR012W-BYBR012W-B SEC27P41811 889 aaKnown RBP2.77□□□□□ -1.97
YBR012W-BYBR012W-B YGR237CP50089 785 aa2.77□□□□□ -1.97
YBR012W-BYBR012W-B SDT1P53078 280 aa2.77□□□□□ -1.97
YBR012W-BYBR012W-B YGR117CP53270 476 aa2.77□□□□□ -1.97
YBR012W-BYBR012W-B YNL143CP53908 130 aa2.77□□□□□ -1.97
YBR012W-BYBR012W-B EGD1Q02642 157 aaKnown RBP2.77□□□□□ -1.97
YBR012W-BYBR012W-B LEE1Q02799 301 aaKnown RBP2.77□□□□□ -1.97
YBR012W-BYBR012W-B LDB18Q07887 179 aa2.77□□□□□ -1.97
YBR012W-BYBR012W-B RGT2Q12300 763 aa2.77□□□□□ -1.97
YBR012W-BYBR012W-B CTF3Q12748 733 aa2.77□□□□□ -1.97
YBR012W-BYBR012W-B COX2P00410 251 aa2.77□□□□□ -1.97
YBR012W-BYBR012W-B NAT1P12945 854 aaKnown RBP2.77□□□□□ -1.97
YBR012W-BYBR012W-B RIT1P23796 513 aa2.77□□□□□ -1.97
YBR012W-BYBR012W-B RAD27P26793 382 aa2.77□□□□□ -1.97
YBR012W-BYBR012W-B CDC3P32457 520 aaKnown RBP2.77□□□□□ -1.97
YBR012W-BYBR012W-B SLA2P33338 968 aa2.77□□□□□ -1.97
YBR012W-BYBR012W-B ERT1P38140 529 aa2.77□□□□□ -1.97
YBR012W-BYBR012W-B PRS3P38689 320 aaKnown RBP2.77□□□□□ -1.97
Retrieved 100 of 5,963 RNA–protein pairs in 53.9 ms