RNA–Protein interactions for RNA: YPL018W

CTF19, Transcript of Outer kinetochore protein, needed for accurate chromosome segregation, yeastyeast

Gene CTF19, Length 1,110 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTF19YPL018W YDL057WQ07379 328 aa7.08□□□□□ -1.28
CTF19YPL018W OSW2Q12202 724 aa7.08□□□□□ -1.28
CTF19YPL018W ATG11Q12527 1178 aa7.08□□□□□ -1.28
CTF19YPL018W SNA3P14359 133 aa7.07□□□□□ -1.28
CTF19YPL018W KIN82P25341 720 aa7.07□□□□□ -1.28
CTF19YPL018W RME1P32338 300 aaKnown RBP7.07□□□□□ -1.28
CTF19YPL018W COT1P32798 439 aa7.07□□□□□ -1.28
CTF19YPL018W SMY2P32909 740 aaKnown RBP7.07□□□□□ -1.28
CTF19YPL018W PSY4P38193 441 aa7.07□□□□□ -1.28
CTF19YPL018W AVT1P47082 602 aa7.07□□□□□ -1.28
CTF19YPL018W VID30P53076 958 aa7.07□□□□□ -1.28
CTF19YPL018W COQ9Q05779 260 aa7.07□□□□□ -1.28
CTF19YPL018W TMA16Q08687 178 aa7.07□□□□□ -1.28
CTF19YPL018W ISU2Q12056 156 aa7.07□□□□□ -1.28
CTF19YPL018W BMT6Q12291 365 aa7.07□□□□□ -1.28
CTF19YPL018W MED1Q12321 566 aa7.07□□□□□ -1.28
CTF19YPL018W MDM20Q12387 796 aaKnown RBP7.07□□□□□ -1.28
CTF19YPL018W PHO8P11491 566 aa7.06□□□□□ -1.28
CTF19YPL018W AFT1P22149 690 aa7.06□□□□□ -1.28
CTF19YPL018W SSD1P24276 1250 aaKnown RBP RIP-Chip data7.06□□□□□ -1.28not detected
CTF19YPL018W MSH3P25336 1018 aa7.06□□□□□ -1.28
CTF19YPL018W NAM7P30771 971 aaKnown RBP7.06□□□□□ -1.28
CTF19YPL018W EFT1P32324 842 aaKnown RBP7.06□□□□□ -1.28
CTF19YPL018W YSC83P32792 385 aa7.06□□□□□ -1.28
CTF19YPL018W YET1P35723 206 aa7.06□□□□□ -1.28
CTF19YPL018W SAP190P36123 1033 aa7.06□□□□□ -1.28
CTF19YPL018W LDH1P38139 375 aa7.06□□□□□ -1.28
CTF19YPL018W AFG3P39925 761 aa7.06□□□□□ -1.28
CTF19YPL018W HUL4P40985 892 aa7.06□□□□□ -1.28
CTF19YPL018W AIP1P46680 615 aaKnown RBP7.06□□□□□ -1.28
CTF19YPL018W TPO2P53283 614 aa7.06□□□□□ -1.28
CTF19YPL018W RTS3P53289 263 aa7.06□□□□□ -1.28
CTF19YPL018W RTT102P53330 157 aa7.06□□□□□ -1.28
CTF19YPL018W NMA111P53920 997 aa7.06□□□□□ -1.28
CTF19YPL018W CUR1Q06469 252 aa7.06□□□□□ -1.28
CTF19YPL018W TCO89Q08921 799 aa7.06□□□□□ -1.28
CTF19YPL018W HIF1Q12373 385 aa7.06□□□□□ -1.28
CTF19YPL018W SCP160P06105 1222 aaKnown RBP RIP-Chip data7.05□□□□□ -1.28not detected
CTF19YPL018W TRK2P28584 889 aa7.05□□□□□ -1.28
CTF19YPL018W KTR2P33550 425 aa7.05□□□□□ -1.28
CTF19YPL018W YEL1P34225 687 aa7.05□□□□□ -1.28
CTF19YPL018W UIP5P36137 443 aa7.05□□□□□ -1.28
CTF19YPL018W PAM1P37304 830 aaKnown RBP7.05□□□□□ -1.28
CTF19YPL018W SAP30P38429 201 aa7.05□□□□□ -1.28
CTF19YPL018W AIM21P40563 679 aa7.05□□□□□ -1.28
CTF19YPL018W FYV8P46949 817 aaKnown RBP7.05□□□□□ -1.28
CTF19YPL018W ATG36P46983 293 aa7.05□□□□□ -1.28
CTF19YPL018W GIR2Q03768 265 aaPredicted RBP7.05□□□□□ -1.28
CTF19YPL018W SPO75Q07798 868 aa7.05□□□□□ -1.28
CTF19YPL018W YAP7Q08182 245 aa7.05□□□□□ -1.28
CTF19YPL018W IES4Q08561 116 aa7.05□□□□□ -1.28
CTF19YPL018W SWI6P09959 803 aa7.04□□□□□ -1.28
CTF19YPL018W MAK16P10962 306 aaPredicted RBP7.04□□□□□ -1.28
CTF19YPL018W DUR3P33413 735 aa7.04□□□□□ -1.28
CTF19YPL018W RPC25P35718 212 aa7.04□□□□□ -1.28
CTF19YPL018W CTM1P38818 585 aa7.04□□□□□ -1.28
CTF19YPL018W JJJ3P47138 172 aa7.04□□□□□ -1.28
CTF19YPL018W TAM41P53230 385 aa7.04□□□□□ -1.28
CTF19YPL018W CAF130P53280 1122 aaPredicted RBP7.04□□□□□ -1.28
CTF19YPL018W NIS1P53939 407 aa7.04□□□□□ -1.28
CTF19YPL018W COG4Q06096 861 aa7.04□□□□□ -1.28
CTF19YPL018W MLH2Q07980 695 aa7.04□□□□□ -1.28
CTF19YPL018W HFI1Q12060 488 aa7.04□□□□□ -1.28
CTF19YPL018W CHS2P14180 963 aa7.03□□□□□ -1.28
CTF19YPL018W SEC65P29478 273 aa7.03□□□□□ -1.28
CTF19YPL018W MSS51P32335 436 aa7.03□□□□□ -1.28
CTF19YPL018W ALD5P40047 520 aaKnown RBP7.03□□□□□ -1.28
CTF19YPL018W SAD1P43589 448 aa7.03□□□□□ -1.28
CTF19YPL018W ARH1P48360 493 aa7.03□□□□□ -1.28
CTF19YPL018W AZR1P50080 613 aa7.03□□□□□ -1.28
CTF19YPL018W YNL146WP53906 100 aa7.03□□□□□ -1.28
CTF19YPL018W VTC3Q02725 835 aa7.03□□□□□ -1.28
CTF19YPL018W UTP14Q04500 899 aaKnown RBP7.03□□□□□ -1.28
CTF19YPL018W WHI2P12611 486 aa7.02□□□□□ -1.29
CTF19YPL018W SDH2P21801 266 aa7.02□□□□□ -1.29
CTF19YPL018W MCM2P29469 868 aa7.02□□□□□ -1.29
CTF19YPL018W MUD1P32605 298 aaKnown RBP7.02□□□□□ -1.29
CTF19YPL018W VID24P38263 362 aa7.02□□□□□ -1.29
CTF19YPL018W MIP6P38760 659 aaKnown RBP7.02□□□□□ -1.29
CTF19YPL018W CUL3P53202 744 aa7.02□□□□□ -1.29
CTF19YPL018W YRR1Q12172 810 aa7.02□□□□□ -1.29
CTF19YPL018W RPS6AP0CX37 236 aaKnown RBP7.01□□□□□ -1.29
CTF19YPL018W RPS6BP0CX38 236 aaPredicted RBP7.01□□□□□ -1.29
CTF19YPL018W APL1P27351 700 aa7.01□□□□□ -1.29
CTF19YPL018W DPH2P32461 534 aa7.01□□□□□ -1.29
CTF19YPL018W TMT1P32643 299 aa7.01□□□□□ -1.29
CTF19YPL018W MPE1P35728 441 aaKnown RBP7.01□□□□□ -1.29
CTF19YPL018W UBP5P39944 805 aa7.01□□□□□ -1.29
CTF19YPL018W INP51P40559 946 aaKnown RBP7.01□□□□□ -1.29
CTF19YPL018W LCB2P40970 561 aa7.01□□□□□ -1.29
CTF19YPL018W SCD6P45978 349 aaKnown RBP RIP-Chip data7.01□□□□□ -1.29not detected
CTF19YPL018W HSH155P49955 971 aaKnown RBP7.01□□□□□ -1.29
CTF19YPL018W VPS75P53853 264 aa7.01□□□□□ -1.29
CTF19YPL018W TIM8P57744 87 aa7.01□□□□□ -1.29
CTF19YPL018W HEM1P09950 548 aaPredicted RBP7□□□□□ -1.29
CTF19YPL018W SSB1P11484 613 aaKnown RBP7□□□□□ -1.29
CTF19YPL018W SKG6P32900 734 aaPredicted RBP7□□□□□ -1.29
CTF19YPL018W PIN4P34217 668 aaKnown RBP RIP-Chip data7□□□□□ -1.29not detected
CTF19YPL018W SSB2P40150 613 aaKnown RBP7□□□□□ -1.29
CTF19YPL018W CSN12P47130 423 aa7□□□□□ -1.29
Retrieved 100 of 5,963 RNA–protein pairs in 18.2 ms